RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 APOL2Q9BQE5 337 aa10.43□□□□□ -0.74
PTP4A2-206ENST00000489313 UNKQ9C0B0 810 aaKnown RBP10.43□□□□□ -0.74
PTP4A2-206ENST00000489313 RSPH14Q9UHP6 348 aa10.43□□□□□ -0.74
PTP4A2-206ENST00000489313 NOVA2Q9UNW9 492 aaKnown RBP10.43□□□□□ -0.74
PTP4A2-206ENST00000489313 AP1M2Q9Y6Q5 423 aa10.43□□□□□ -0.74
PTP4A2-206ENST00000489313 NIPBLQ6KC79 2804 aaeCLIP10.42□□□□□ -0.74
PTP4A2-206ENST00000489313 C2orf81A6NN90 581 aa10.42□□□□□ -0.74
PTP4A2-206ENST00000489313 CCL22O00626 93 aa10.42□□□□□ -0.74
PTP4A2-206ENST00000489313 E2F3O00716 465 aa10.42□□□□□ -0.74
PTP4A2-206ENST00000489313 ZSCAN9O15535 394 aaPredicted RBP10.42□□□□□ -0.74
PTP4A2-206ENST00000489313 HNRNPRO43390 633 aaKnown RBP10.42□□□□□ -0.74
PTP4A2-206ENST00000489313 KLHL41O60662 606 aa10.42□□□□□ -0.74
PTP4A2-206ENST00000489313 ZG16O60844 167 aa10.42□□□□□ -0.74
PTP4A2-206ENST00000489313 ATP1B2P14415 290 aaPredicted RBP10.42□□□□□ -0.74
PTP4A2-206ENST00000489313 UGT2B7P16662 529 aa10.42□□□□□ -0.74
PTP4A2-206ENST00000489313 ITGA3P26006 1051 aa10.42□□□□□ -0.74
PTP4A2-206ENST00000489313 ARHGAP25P42331 645 aa10.42□□□□□ -0.74
PTP4A2-206ENST00000489313 GABRA4P48169 554 aa10.42□□□□□ -0.74
PTP4A2-206ENST00000489313 SOX8P57073 446 aa10.42□□□□□ -0.74
PTP4A2-206ENST00000489313 BOP1Q14137 746 aaKnown RBP10.42□□□□□ -0.74
PTP4A2-206ENST00000489313 TAF1AQ15573 450 aaPredicted RBP10.42□□□□□ -0.74
PTP4A2-206ENST00000489313 ASTE1Q2TB18 679 aaPredicted RBP10.42□□□□□ -0.74
PTP4A2-206ENST00000489313 NKAIN1Q4KMZ8 207 aa10.42□□□□□ -0.74
PTP4A2-206ENST00000489313 ZNF658BQ4V348 819 aaPredicted RBP10.42□□□□□ -0.74
PTP4A2-206ENST00000489313 LUZP1Q86V48 1076 aa10.42□□□□□ -0.74
PTP4A2-206ENST00000489313 PTERQ96BW5 349 aa10.42□□□□□ -0.74
PTP4A2-206ENST00000489313 COPS8Q99627 209 aa10.42□□□□□ -0.74
PTP4A2-206ENST00000489313 WDR77Q9BQA1 342 aaPredicted RBP10.42□□□□□ -0.74
PTP4A2-206ENST00000489313 GORASP1Q9BQQ3 440 aa10.42□□□□□ -0.74
PTP4A2-206ENST00000489313 MVB12BQ9H7P6 319 aa10.42□□□□□ -0.74
PTP4A2-206ENST00000489313 C10orf88Q9H8K7 445 aa10.42□□□□□ -0.74
PTP4A2-206ENST00000489313 ATP13A2Q9NQ11 1180 aa10.42□□□□□ -0.74
PTP4A2-206ENST00000489313 TXLNGQ9NUQ3 528 aa10.42□□□□□ -0.74
PTP4A2-206ENST00000489313 IRAK4Q9NWZ3 460 aa10.42□□□□□ -0.74
PTP4A2-206ENST00000489313 DDX56Q9NY93 547 aaKnown RBP10.42□□□□□ -0.74
PTP4A2-206ENST00000489313 SPHK1Q9NYA1 384 aa10.42□□□□□ -0.74
PTP4A2-206ENST00000489313 ICKQ9UPZ9 632 aa10.42□□□□□ -0.74
PTP4A2-206ENST00000489313 PKDREJQ9NTG1 2253 aa10.42□□□□□ -0.74
PTP4A2-206ENST00000489313 C17orf113A0A1B0GUU1 675 aa10.41□□□□□ -0.74
PTP4A2-206ENST00000489313 AGAP14A8MT82 685 aa10.41□□□□□ -0.74
PTP4A2-206ENST00000489313 CFAP99D6REC4 459 aa10.41□□□□□ -0.74
PTP4A2-206ENST00000489313 AGPSO00116 658 aa10.41□□□□□ -0.74
PTP4A2-206ENST00000489313 AKR1B10O60218 316 aa10.41□□□□□ -0.74
PTP4A2-206ENST00000489313 CDKN1CP49918 316 aaPredicted RBP10.41□□□□□ -0.74
PTP4A2-206ENST00000489313 ZRSR2Q15696 482 aaKnown RBP10.41□□□□□ -0.74
PTP4A2-206ENST00000489313 TAZQ16635 292 aa10.41□□□□□ -0.74
PTP4A2-206ENST00000489313 MRPL14Q6P1L8 145 aaKnown RBP10.41□□□□□ -0.74
PTP4A2-206ENST00000489313 OR5AR1Q8NGP9 310 aa10.41□□□□□ -0.74
PTP4A2-206ENST00000489313 PROKR1Q8TCW9 393 aa10.41□□□□□ -0.74
PTP4A2-206ENST00000489313 GRHL3Q8TE85 626 aa10.41□□□□□ -0.74
PTP4A2-206ENST00000489313 TFGQ92734 400 aaPredicted RBP10.41□□□□□ -0.74
PTP4A2-206ENST00000489313 P3H4Q92791 437 aa10.41□□□□□ -0.74
PTP4A2-206ENST00000489313 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.41□□□□□ -0.74
PTP4A2-206ENST00000489313 ULK4Q96C45 1275 aa10.41□□□□□ -0.74
PTP4A2-206ENST00000489313 IQCDQ96DY2 449 aa10.41□□□□□ -0.74
PTP4A2-206ENST00000489313 QKIQ96PU8 341 aaKnown RBP eCLIP10.41□□□□□ -0.74
PTP4A2-206ENST00000489313 OR2A14Q96R47 310 aa10.41□□□□□ -0.74
PTP4A2-206ENST00000489313 AP1M1Q9BXS5 423 aa10.41□□□□□ -0.74
PTP4A2-206ENST00000489313 SLC6A20Q9NP91 592 aa10.41□□□□□ -0.74
PTP4A2-206ENST00000489313 SLC22A11Q9NSA0 550 aa10.41□□□□□ -0.74
PTP4A2-206ENST00000489313 SPTLC3Q9NUV7 552 aa10.41□□□□□ -0.74
PTP4A2-206ENST00000489313 IFNKQ9P0W0 207 aa10.41□□□□□ -0.74
PTP4A2-206ENST00000489313 FBXL4Q9UKA2 621 aa10.41□□□□□ -0.74
PTP4A2-206ENST00000489313 ENTPD4Q9Y227 616 aa10.41□□□□□ -0.74
PTP4A2-206ENST00000489313 PCNX1Q96RV3 2341 aa10.41□□□□□ -0.74
PTP4A2-206ENST00000489313 C5orf60A6NFR6 353 aa10.4□□□□□ -0.74
PTP4A2-206ENST00000489313 SPOPO43791 374 aa10.4□□□□□ -0.74
PTP4A2-206ENST00000489313 PRSS56P0CW18 603 aa10.4□□□□□ -0.74
PTP4A2-206ENST00000489313 ITGALP20701 1170 aa10.4□□□□□ -0.74
PTP4A2-206ENST00000489313 COMTP21964 271 aa10.4□□□□□ -0.74
PTP4A2-206ENST00000489313 ADRA1AP35348 466 aa10.4□□□□□ -0.74
PTP4A2-206ENST00000489313 CD151P48509 253 aa10.4□□□□□ -0.74
PTP4A2-206ENST00000489313 GEMP55040 296 aa10.4□□□□□ -0.74
PTP4A2-206ENST00000489313 PER3P56645 1201 aa10.4□□□□□ -0.74
PTP4A2-206ENST00000489313 AIMP2Q13155 320 aaKnown RBP10.4□□□□□ -0.74
PTP4A2-206ENST00000489313 NAA30Q147X3 362 aaPredicted RBP10.4□□□□□ -0.74
PTP4A2-206ENST00000489313 SP5Q6BEB4 398 aaPredicted RBP10.4□□□□□ -0.74
PTP4A2-206ENST00000489313 CAVIN1Q6NZI2 390 aaKnown RBP10.4□□□□□ -0.74
PTP4A2-206ENST00000489313 RANBP10Q6VN20 620 aa10.4□□□□□ -0.74
PTP4A2-206ENST00000489313 UNC5AQ6ZN44 842 aa10.4□□□□□ -0.74
PTP4A2-206ENST00000489313 SNX20Q7Z614 316 aa10.4□□□□□ -0.74
PTP4A2-206ENST00000489313 CLDN19Q8N6F1 224 aa10.4□□□□□ -0.74
PTP4A2-206ENST00000489313 CNDP1Q96KN2 507 aa10.4□□□□□ -0.74
PTP4A2-206ENST00000489313 VAT1Q99536 393 aa10.4□□□□□ -0.74
PTP4A2-206ENST00000489313 GBA3Q9H227 469 aa10.4□□□□□ -0.74
PTP4A2-206ENST00000489313 TRHDEQ9UKU6 1024 aa10.4□□□□□ -0.74
PTP4A2-206ENST00000489313 PRSS44E7EML9 344 aa10.39□□□□□ -0.75
PTP4A2-206ENST00000489313 CHRM5P08912 532 aaPredicted RBP10.39□□□□□ -0.75
PTP4A2-206ENST00000489313 CD63P08962 238 aa10.39□□□□□ -0.75
PTP4A2-206ENST00000489313 ITGAXP20702 1163 aa10.39□□□□□ -0.75
PTP4A2-206ENST00000489313 RBL1P28749 1068 aa10.39□□□□□ -0.75
PTP4A2-206ENST00000489313 MC4RP32245 332 aa10.39□□□□□ -0.75
PTP4A2-206ENST00000489313 ZNF140P52738 457 aaPredicted RBP10.39□□□□□ -0.75
PTP4A2-206ENST00000489313 TPM4P67936 248 aa10.39□□□□□ -0.75
PTP4A2-206ENST00000489313 CDC16Q13042 620 aa10.39□□□□□ -0.75
PTP4A2-206ENST00000489313 PRAMEF13Q5VWM6 474 aa10.39□□□□□ -0.75
PTP4A2-206ENST00000489313 ZNF449Q6P9G9 518 aa10.39□□□□□ -0.75
PTP4A2-206ENST00000489313 FJX1Q86VR8 437 aa10.39□□□□□ -0.75
PTP4A2-206ENST00000489313 SERPINA9Q86WD7 417 aa10.39□□□□□ -0.75
PTP4A2-206ENST00000489313 MCEMP1Q8IX19 187 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms