RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 ESRRBO95718 433 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 FUCA1P04066 466 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 RPL10P27635 214 aaKnown RBP9.76□□□□□ -0.85
USP11-211ENST00000489111 ACADLP28330 430 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 CCNG1P51959 295 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 ILF3Q12906 894 aaKnown RBP eCLIP9.76□□□□□ -0.85
USP11-211ENST00000489111 IFT88Q13099 833 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 KRT33BQ14525 404 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 ALG11Q2TAA5 492 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 TPRG1LQ5T0D9 272 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 XKR5Q6UX68 686 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 MAMSTRQ6ZN01 415 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 ATG14Q6ZNE5 492 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 DCP2Q8IU60 420 aaKnown RBP9.76□□□□□ -0.85
USP11-211ENST00000489111 CLYBLQ8N0X4 340 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 RAB42Q8N4Z0 105 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 DEFB119Q8N690 84 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 SPDYE1Q8NFV5 336 aaPredicted RBP9.76□□□□□ -0.85
USP11-211ENST00000489111 AGAP11Q8TF27 550 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 TFGQ92734 400 aaPredicted RBP9.76□□□□□ -0.85
USP11-211ENST00000489111 TSACCQ96A04 125 aaPredicted RBP9.76□□□□□ -0.85
USP11-211ENST00000489111 RAD51AP1Q96B01 352 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 MED8Q96G25 268 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 KLHDC7BQ96G42 594 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 C12orf66Q96MD2 445 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 PKP4Q99569 1192 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 ZDHHC5Q9C0B5 715 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 MIR1-1HGQ9H1L0 117 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 TRIT1Q9H3H1 467 aaKnown RBP9.76□□□□□ -0.85
USP11-211ENST00000489111 NOL11Q9H8H0 719 aaKnown RBP9.76□□□□□ -0.85
USP11-211ENST00000489111 IPPKQ9H8X2 491 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 PFDN4Q9NQP4 134 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 IMP3Q9NV31 184 aaKnown RBP9.76□□□□□ -0.85
USP11-211ENST00000489111 DNAJC11Q9NVH1 559 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 DLGAP2Q9P1A6 1054 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 STOX2Q9P2F5 926 aaPredicted RBP9.76□□□□□ -0.85
USP11-211ENST00000489111 CIDEBQ9UHD4 219 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 TRAF6Q9Y4K3 522 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 ASB1Q9Y576 335 aa9.76□□□□□ -0.85
USP11-211ENST00000489111 KRT87PA6NCN2 255 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 TMEM221A6NGB7 291 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 ZNF839A8K0R7 811 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 M0R296 226 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 MYO1CO00159 1063 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 PI15O43692 258 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 KDM1AO60341 852 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 SLC16A8O95907 504 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 TNFP01375 233 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 ENO1P06733 434 aaKnown RBP9.75□□□□□ -0.85
USP11-211ENST00000489111 ITPKAP23677 461 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 CD38P28907 300 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 HOXA6P31267 233 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 GGT5P36269 586 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 ACTR1BP42025 376 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 GDF5P43026 501 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 SLC6A12P48065 614 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 IDH3AP50213 366 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 ACTR1AP61163 376 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 RACK1P63244 317 aaKnown RBP9.75□□□□□ -0.85
USP11-211ENST00000489111 SH3BP2P78314 561 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 NAE1Q13564 534 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 TCEA2Q15560 299 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 PTCHD3Q3KNS1 767 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 CCSMST1Q4G0I0 132 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 WDR45BQ5MNZ6 344 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 KANK2Q63ZY3 851 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 CLEC6AQ6EIG7 209 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 FOXR1Q6PIV2 292 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 AGTRAPQ6RW13 159 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 CCDC121Q6ZUS5 278 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 LPCAT2Q7L5N7 544 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 TRPM8Q7Z2W7 1104 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 MAVSQ7Z434 540 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 SYVN1Q86TM6 617 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 PARGQ86W56 976 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 MYLK4Q86YV6 388 aaPredicted RBP9.75□□□□□ -0.85
USP11-211ENST00000489111 SYTL1Q8IYJ3 562 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 TBC1D21Q8IYX1 336 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 SLC22A18ASQ8N1D0 253 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 GBP7Q8N8V2 638 aaPredicted RBP9.75□□□□□ -0.85
USP11-211ENST00000489111 OR5AR1Q8NGP9 310 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 OR9A1PQ8NGU1 263 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 CCT6BQ92526 530 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 SKA1Q96BD8 255 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 PPP1R36Q96LQ0 422 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 LRRC37BQ96QE4 947 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 NUSAP1Q9BXS6 441 aaKnown RBP9.75□□□□□ -0.85
USP11-211ENST00000489111 NUF2Q9BZD4 464 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 ATG10Q9H0Y0 220 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 SLC32A1Q9H598 525 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 ACTR8Q9H981 624 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 KCNK13Q9HB14 408 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 ZBTB26Q9HCK0 441 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 TCF7L2Q9NQB0 619 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 PRMT8Q9NR22 394 aaPredicted RBP9.75□□□□□ -0.85
USP11-211ENST00000489111 TRNAU1APQ9NX07 287 aaKnown RBP9.75□□□□□ -0.85
USP11-211ENST00000489111 HEY2Q9UBP5 337 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 TDRKHQ9Y2W6 561 aaKnown RBP9.75□□□□□ -0.85
USP11-211ENST00000489111 PLEKHM1Q9Y4G2 1056 aa9.75□□□□□ -0.85
USP11-211ENST00000489111 HEBP2Q9Y5Z4 205 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms