RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 OAS2P29728 719 aaKnown RBP24.19■■□□□ 1.46
HMGN1-217ENST00000489072 DNAJC21Q5F1R6 531 aaKnown RBP24.19■■□□□ 1.46
HMGN1-217ENST00000489072 CTSL3PQ5NE16 218 aa24.19■■□□□ 1.46
HMGN1-217ENST00000489072 PTRHD1Q6GMV3 140 aaKnown RBP24.19■■□□□ 1.46
HMGN1-217ENST00000489072 KIAA0930Q6ICG6 404 aaPredicted RBP24.19■■□□□ 1.46
HMGN1-217ENST00000489072 SPESP1Q6UW49 350 aa24.19■■□□□ 1.46
HMGN1-217ENST00000489072 TRIM73Q86UV7 250 aa24.19■■□□□ 1.46
HMGN1-217ENST00000489072 OTUD6BQ8N6M0 293 aa24.19■■□□□ 1.46
HMGN1-217ENST00000489072 OR8K5Q8NH50 307 aa24.19■■□□□ 1.46
HMGN1-217ENST00000489072 FLVCR1-AS1Q8TAF5 88 aa24.19■■□□□ 1.46
HMGN1-217ENST00000489072 CT55Q8WUE5 264 aa24.19■■□□□ 1.46
HMGN1-217ENST00000489072 OR2A14Q96R47 310 aa24.19■■□□□ 1.46
HMGN1-217ENST00000489072 GNPTGQ9UJJ9 305 aa24.19■■□□□ 1.46
HMGN1-217ENST00000489072 GOLGA8MH3BSY2 632 aa24.18■■□□□ 1.46
HMGN1-217ENST00000489072 SCRG1O75711 98 aa24.18■■□□□ 1.46
HMGN1-217ENST00000489072 SLCO2B1O94956 709 aa24.18■■□□□ 1.46
HMGN1-217ENST00000489072 APOA4P06727 396 aa24.18■■□□□ 1.46
HMGN1-217ENST00000489072 CHRM5P08912 532 aaPredicted RBP24.18■■□□□ 1.46
HMGN1-217ENST00000489072 CCNYL3P0C7X3 344 aa24.18■■□□□ 1.46
HMGN1-217ENST00000489072 UGT2B7P16662 529 aa24.18■■□□□ 1.46
HMGN1-217ENST00000489072 EIF3BP55884 814 aaKnown RBP24.18■■□□□ 1.46
HMGN1-217ENST00000489072 ABRQ12979 859 aa24.18■■□□□ 1.46
HMGN1-217ENST00000489072 TYSND1Q2T9J0 566 aa24.18■■□□□ 1.46
HMGN1-217ENST00000489072 PRAMEF17Q5VTA0 474 aa24.18■■□□□ 1.46
HMGN1-217ENST00000489072 BORAQ6PGQ7 559 aa24.18■■□□□ 1.46
HMGN1-217ENST00000489072 LRRC6Q86X45 466 aa24.18■■□□□ 1.46
HMGN1-217ENST00000489072 TMEM126BQ8IUX1 230 aa24.18■■□□□ 1.46
HMGN1-217ENST00000489072 SLC38A9Q8NBW4 561 aa24.18■■□□□ 1.46
HMGN1-217ENST00000489072 MCUQ8NE86 351 aa24.18■■□□□ 1.46
HMGN1-217ENST00000489072 LPGAT1Q92604 370 aa24.18■■□□□ 1.46
HMGN1-217ENST00000489072 BIRC8Q96P09 236 aa24.18■■□□□ 1.46
HMGN1-217ENST00000489072 LATS2Q9NRM7 1088 aa24.18■■□□□ 1.46
HMGN1-217ENST00000489072 CES2O00748 559 aa24.17■■□□□ 1.46
HMGN1-217ENST00000489072 MLNP12872 115 aa24.17■■□□□ 1.46
HMGN1-217ENST00000489072 TCN2P20062 427 aa24.17■■□□□ 1.46
HMGN1-217ENST00000489072 PEBP1P30086 187 aaKnown RBP24.17■■□□□ 1.46
HMGN1-217ENST00000489072 FNTAP49354 379 aa24.17■■□□□ 1.46
HMGN1-217ENST00000489072 DNASE1L3Q13609 305 aa24.17■■□□□ 1.46
HMGN1-217ENST00000489072 ZNF789Q5FWF6 425 aa24.17■■□□□ 1.46
HMGN1-217ENST00000489072 ARMC3Q5W041 872 aa24.17■■□□□ 1.46
HMGN1-217ENST00000489072 MRNIPQ6NTE8 343 aa24.17■■□□□ 1.46
HMGN1-217ENST00000489072 C16orf46Q6P387 395 aa24.17■■□□□ 1.46
HMGN1-217ENST00000489072 CASC4Q6P4E1 433 aa24.17■■□□□ 1.46
HMGN1-217ENST00000489072 FAM199XQ6PEV8 388 aaPredicted RBP24.17■■□□□ 1.46
HMGN1-217ENST00000489072 AGGF1Q8N302 714 aaeCLIP24.17■■□□□ 1.46
HMGN1-217ENST00000489072 OR1L3Q8NH93 324 aa24.17■■□□□ 1.46
HMGN1-217ENST00000489072 CFAP61Q8NHU2 1237 aa24.17■■□□□ 1.46
HMGN1-217ENST00000489072 PDLIM2Q96JY6 352 aa24.17■■□□□ 1.46
HMGN1-217ENST00000489072 CATSPER2Q96P56 530 aa24.17■■□□□ 1.46
HMGN1-217ENST00000489072 SERPINB12Q96P63 405 aa24.17■■□□□ 1.46
HMGN1-217ENST00000489072 PANX3Q96QZ0 392 aa24.17■■□□□ 1.46
HMGN1-217ENST00000489072 RUFY1Q96T51 708 aa24.17■■□□□ 1.46
HMGN1-217ENST00000489072 MENTQ9BUN1 341 aa24.17■■□□□ 1.46
HMGN1-217ENST00000489072 XAB2Q9HCS7 855 aaKnown RBP24.17■■□□□ 1.46
HMGN1-217ENST00000489072 IL1RAPL1Q9NZN1 696 aa24.17■■□□□ 1.46
HMGN1-217ENST00000489072 OR6C2Q9NZP2 312 aa24.17■■□□□ 1.46
HMGN1-217ENST00000489072 CIDEBQ9UHD4 219 aa24.17■■□□□ 1.46
HMGN1-217ENST00000489072 TMEM150CB9EJG8 249 aa24.16■■□□□ 1.46
HMGN1-217ENST00000489072 CPNE3O75131 537 aaKnown RBP24.16■■□□□ 1.46
HMGN1-217ENST00000489072 KATNA1O75449 491 aa24.16■■□□□ 1.46
HMGN1-217ENST00000489072 MSL3P1P0C860 447 aa24.16■■□□□ 1.46
HMGN1-217ENST00000489072 PKLRP30613 574 aa24.16■■□□□ 1.46
HMGN1-217ENST00000489072 MC1RQ01726 317 aa24.16■■□□□ 1.46
HMGN1-217ENST00000489072 GPS2Q13227 327 aa24.16■■□□□ 1.46
HMGN1-217ENST00000489072 GRB7Q14451 532 aa24.16■■□□□ 1.46
HMGN1-217ENST00000489072 TMED2Q15363 201 aa24.16■■□□□ 1.46
HMGN1-217ENST00000489072 ZIC1Q15915 447 aa24.16■■□□□ 1.46
HMGN1-217ENST00000489072 CRTC2Q53ET0 693 aaPredicted RBP24.16■■□□□ 1.46
HMGN1-217ENST00000489072 CDHR3Q6ZTQ4 885 aa24.16■■□□□ 1.46
HMGN1-217ENST00000489072 SDCCAG8Q86SQ7 713 aaPredicted RBP24.16■■□□□ 1.46
HMGN1-217ENST00000489072 NAT8LQ8N9F0 302 aa24.16■■□□□ 1.46
HMGN1-217ENST00000489072 LMNTD1Q8N9Z9 388 aa24.16■■□□□ 1.46
HMGN1-217ENST00000489072 FANCEQ9HB96 536 aa24.16■■□□□ 1.46
HMGN1-217ENST00000489072 PCDHGA6Q9Y5G7 932 aa24.16■■□□□ 1.46
HMGN1-217ENST00000489072 GOLGA6L10A0A0M3HER8 536 aa24.15■■□□□ 1.46
HMGN1-217ENST00000489072 FAM237BA0A1B0GVD1 139 aa24.15■■□□□ 1.46
HMGN1-217ENST00000489072 SDR42E2A6NKP2 422 aa24.15■■□□□ 1.46
HMGN1-217ENST00000489072 FMO4P31512 558 aa24.15■■□□□ 1.46
HMGN1-217ENST00000489072 MAGEA3P43357 314 aa24.15■■□□□ 1.46
HMGN1-217ENST00000489072 KYNUQ16719 465 aa24.15■■□□□ 1.46
HMGN1-217ENST00000489072 ANKRD20A4Q4UJ75 823 aa24.15■■□□□ 1.46
HMGN1-217ENST00000489072 UNC5DQ6UXZ4 953 aa24.15■■□□□ 1.46
HMGN1-217ENST00000489072 C19orf47Q8N9M1 422 aaKnown RBP24.15■■□□□ 1.46
HMGN1-217ENST00000489072 LINC01555Q8NAE3 123 aa24.15■■□□□ 1.46
HMGN1-217ENST00000489072 GRK7Q8WTQ7 553 aa24.15■■□□□ 1.46
HMGN1-217ENST00000489072 ZNF669Q96BR6 464 aaPredicted RBP24.15■■□□□ 1.46
HMGN1-217ENST00000489072 TCF12Q99081 682 aa24.15■■□□□ 1.46
HMGN1-217ENST00000489072 SYTL2Q9HCH5 934 aa24.15■■□□□ 1.46
HMGN1-217ENST00000489072 FAM60AQ9NP50 221 aa24.15■■□□□ 1.46
HMGN1-217ENST00000489072 SAMD15Q9P1V8 674 aa24.15■■□□□ 1.46
HMGN1-217ENST00000489072 KCND3Q9UK17 655 aa24.15■■□□□ 1.46
HMGN1-217ENST00000489072 PCDHB3Q9Y5E6 796 aa24.15■■□□□ 1.46
HMGN1-217ENST00000489072 FER1L5A0AVI2 2057 aa24.15■■□□□ 1.46
HMGN1-217ENST00000489072 NIPSNAP2O75323 286 aa24.14■■□□□ 1.45
HMGN1-217ENST00000489072 FURINP09958 794 aa24.14■■□□□ 1.45
HMGN1-217ENST00000489072 OGNP20774 298 aaKnown RBP24.14■■□□□ 1.45
HMGN1-217ENST00000489072 RAB28P51157 221 aa24.14■■□□□ 1.45
HMGN1-217ENST00000489072 POLE2P56282 527 aa24.14■■□□□ 1.45
HMGN1-217ENST00000489072 DHX34Q14147 1143 aaKnown RBP24.14■■□□□ 1.45
HMGN1-217ENST00000489072 DEFB109BQ30KR1 87 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms