RNA–Protein interactions for RNA: ENST00000488741.5

CREM-238, Transcript of cAMP responsive element modulator, human

TSL 2 BASIC

Gene CREM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CREM-238	ENST00000488741	NR4A1	P22736	598 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	BDNF	P23560	247 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	CXCR2	P25025	360 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	HOXC13	P31276	330 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	DCT	P40126	519 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	ADH7	P40394	386 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	RPS5	P46782	204 aa	Known RBP	5.04	□□□□□ -1.6
CREM-238	ENST00000488741	PPP3CC	P48454	512 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	CXCR3	P49682	368 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	TAF6	P49848	677 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	SERPINH1	P50454	418 aa	Known RBP	5.04	□□□□□ -1.6
CREM-238	ENST00000488741	ARHGDIA	P52565	204 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	PGGT1B	P53609	377 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	CDH13	P55290	713 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	DAOA	P59103	153 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	VBP1	P61758	197 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	UFM1	P61960	85 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	PITX1	P78337	314 aa	Predicted RBP	5.04	□□□□□ -1.6
CREM-238	ENST00000488741	CCNA1	P78396	465 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	MRPS15	P82914	257 aa	Known RBP	5.04	□□□□□ -1.6
CREM-238	ENST00000488741	TEK	Q02763	1124 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	RIPPLY1	Q0D2K3	151 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	FCHO2	Q0JRZ9	810 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	MAD2L1	Q13257	205 aa	Predicted RBP	5.04	□□□□□ -1.6
CREM-238	ENST00000488741	PCBP1	Q15365	356 aa	Known RBP eCLIP	5.04	□□□□□ -1.6
CREM-238	ENST00000488741	TBCE	Q15813	527 aa	Predicted RBP	5.04	□□□□□ -1.6
CREM-238	ENST00000488741	DDR2	Q16832	855 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	FBXO43	Q4G163	708 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	ATP6AP1L	Q52LC2	224 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	PYCR3	Q53H96	274 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	FBXO47	Q5MNV8	452 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	NOL9	Q5SY16	702 aa	Known RBP	5.04	□□□□□ -1.6
CREM-238	ENST00000488741	CATSPERE	Q5SY80	951 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	TPRG1L	Q5T0D9	272 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	GPR158	Q5T848	1215 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	MFSD4B	Q5TF39	518 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	FAM72A	Q5TYM5	149 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	TMEM236	Q5W0B7	351 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	C9orf57	Q5W0N0	161 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	STEAP3	Q658P3	488 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	FAM72D	Q6L9T8	149 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	CAPN13	Q6MZZ7	669 aa	Predicted RBP	5.04	□□□□□ -1.6
CREM-238	ENST00000488741	ZNF280D	Q6N043	979 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	PSAPL1	Q6NUJ1	521 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	SHQ1	Q6PI26	577 aa	Known RBP	5.04	□□□□□ -1.6
CREM-238	ENST00000488741	SYCE2	Q6PIF2	218 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	XKRX	Q6PP77	449 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	SPESP1	Q6UW49	350 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	CCBE1	Q6UXH8	406 aa	Predicted RBP	5.04	□□□□□ -1.6
CREM-238	ENST00000488741	DLEU7	Q6UYE1	221 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	RNF165	Q6ZSG1	346 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	RPS27L	Q71UM5	84 aa	Known RBP	5.04	□□□□□ -1.6
CREM-238	ENST00000488741	OTOP3	Q7RTS5	596 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	GPR149	Q86SP6	731 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	RBM23	Q86U06	439 aa	Known RBP	5.04	□□□□□ -1.6
CREM-238	ENST00000488741	PDZD3	Q86UT5	571 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	C11orf74	Q86VG3	221 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	FAM72B	Q86X60	149 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	RIOX2	Q8IUF8	465 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	CCDC103	Q8IW40	242 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	UBQLNL	Q8IYU4	475 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	MICU2	Q8IYU8	434 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	CLIP4	Q8N3C7	705 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	METTL4	Q8N3J2	472 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	FBXO39	Q8N4B4	442 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	CARNMT1	Q8N4J0	409 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	TOP6BL	Q8N6T0	577 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	PAF1	Q8N7H5	531 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	NETO2	Q8NC67	525 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	B3GALNT2	Q8NCR0	500 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	APPL2	Q8NEU8	664 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	IL17RD	Q8NFM7	739 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	OR2T12	Q8NG77	320 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	OR56A4	Q8NGH8	313 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	GPR150	Q8NGU9	434 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	STAG3L4	Q8TBR4	150 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	SUN5	Q8TC36	379 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	SLC2A14	Q8TDB8	520 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	ANKRD49	Q8WVL7	239 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	HTRA1	Q92743	480 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	FATE1	Q969F0	183 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	FAM162A	Q96A26	154 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	TP53INP1	Q96A56	240 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	KIAA1191	Q96A73	305 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	PTER	Q96BW5	349 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	RMDN1	Q96DB5	314 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	TMCO6	Q96DC7	493 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	TEPSIN	Q96N21	525 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	ATOH8	Q96SQ7	321 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	CDK5RAP1	Q96SZ6	601 aa	Known RBP	5.04	□□□□□ -1.6
CREM-238	ENST00000488741	ZBTB18	Q99592	522 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	FDXACB1	Q9BRP7	624 aa	Predicted RBP	5.04	□□□□□ -1.6
CREM-238	ENST00000488741	DERL2	Q9GZP9	239 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	ADAM19	Q9H013	955 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	DCSTAMP	Q9H295	470 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	DPEP3	Q9H4B8	488 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	WDCP	Q9H6R7	721 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	CATSPERB	Q9H7T0	1116 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	ACTR8	Q9H981	624 aa		5.04	□□□□□ -1.6
CREM-238	ENST00000488741	SMURF2	Q9HAU4	748 aa		5.04	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms