RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 CBSLP0DN79 551 aa10.73□□□□□ -0.69
UBE4B-210ENST00000488228 THRAP10827 490 aa10.73□□□□□ -0.69
UBE4B-210ENST00000488228 AMD1P17707 334 aa10.73□□□□□ -0.69
UBE4B-210ENST00000488228 CD9P21926 228 aa10.73□□□□□ -0.69
UBE4B-210ENST00000488228 PKLRP30613 574 aa10.73□□□□□ -0.69
UBE4B-210ENST00000488228 SPRP35270 261 aaPredicted RBP10.73□□□□□ -0.69
UBE4B-210ENST00000488228 CBSP35520 551 aa10.73□□□□□ -0.69
UBE4B-210ENST00000488228 RGS4P49798 205 aa10.73□□□□□ -0.69
UBE4B-210ENST00000488228 SLC12A2P55011 1212 aa10.73□□□□□ -0.69
UBE4B-210ENST00000488228 TUBB4BP68371 445 aa10.73□□□□□ -0.69
UBE4B-210ENST00000488228 POU4F1Q01851 419 aa10.73□□□□□ -0.69
UBE4B-210ENST00000488228 TARDBPQ13148 414 aaKnown RBP eCLIP10.73□□□□□ -0.69
UBE4B-210ENST00000488228 USP10Q14694 798 aaKnown RBP10.73□□□□□ -0.69
UBE4B-210ENST00000488228 ISXQ2M1V0 245 aa10.73□□□□□ -0.69
UBE4B-210ENST00000488228 PHF19Q5T6S3 580 aa10.73□□□□□ -0.69
UBE4B-210ENST00000488228 GRTP1Q5TC63 336 aa10.73□□□□□ -0.69
UBE4B-210ENST00000488228 UGT3A1Q6NUS8 523 aa10.73□□□□□ -0.69
UBE4B-210ENST00000488228 IRGCQ6NXR0 463 aa10.73□□□□□ -0.69
UBE4B-210ENST00000488228 WDR93Q6P2C0 686 aa10.73□□□□□ -0.69
UBE4B-210ENST00000488228 TMEM207Q6UWW9 146 aa10.73□□□□□ -0.69
UBE4B-210ENST00000488228 ZNF574Q6ZN55 896 aaPredicted RBP10.73□□□□□ -0.69
UBE4B-210ENST00000488228 NEK10Q6ZWH5 1172 aa10.73□□□□□ -0.69
UBE4B-210ENST00000488228 TMPRSS7Q7RTY8 843 aa10.73□□□□□ -0.69
UBE4B-210ENST00000488228 TBC1D21Q8IYX1 336 aa10.73□□□□□ -0.69
UBE4B-210ENST00000488228 MYO1HQ8N1T3 1032 aa10.73□□□□□ -0.69
UBE4B-210ENST00000488228 RCBTB1Q8NDN9 531 aa10.73□□□□□ -0.69
UBE4B-210ENST00000488228 OR4E2Q8NGC2 313 aa10.73□□□□□ -0.69
UBE4B-210ENST00000488228 WDR48Q8TAF3 677 aa10.73□□□□□ -0.69
UBE4B-210ENST00000488228 SLC44A1Q8WWI5 657 aa10.73□□□□□ -0.69
UBE4B-210ENST00000488228 NCSTNQ92542 709 aa10.73□□□□□ -0.69
UBE4B-210ENST00000488228 FOPNLQ96NB1 174 aa10.73□□□□□ -0.69
UBE4B-210ENST00000488228 TGM7Q96PF1 710 aa10.73□□□□□ -0.69
UBE4B-210ENST00000488228 SCNM1Q9BWG6 230 aa10.73□□□□□ -0.69
UBE4B-210ENST00000488228 PARD6BQ9BYG5 372 aa10.73□□□□□ -0.69
UBE4B-210ENST00000488228 SRMSQ9H3Y6 488 aa10.73□□□□□ -0.69
UBE4B-210ENST00000488228 ADAMTS6Q9UKP5 1117 aa10.73□□□□□ -0.69
UBE4B-210ENST00000488228 IKZF3Q9UKT9 509 aa10.73□□□□□ -0.69
UBE4B-210ENST00000488228 ENTPD2Q9Y5L3 495 aa10.73□□□□□ -0.69
UBE4B-210ENST00000488228 IGHV5-10-1A0A0J9YXX1 117 aa10.72□□□□□ -0.69
UBE4B-210ENST00000488228 GSAPA4D1B5 854 aa10.72□□□□□ -0.69
UBE4B-210ENST00000488228 NPEPPSL1A6NEC2 478 aa10.72□□□□□ -0.69
UBE4B-210ENST00000488228 EIF3FO00303 357 aaPredicted RBP10.72□□□□□ -0.69
UBE4B-210ENST00000488228 BTN3A3O00478 584 aa10.72□□□□□ -0.69
UBE4B-210ENST00000488228 KIF1CO43896 1103 aaKnown RBP10.72□□□□□ -0.69
UBE4B-210ENST00000488228 WISP3O95389 354 aaPredicted RBP10.72□□□□□ -0.69
UBE4B-210ENST00000488228 CATP04040 527 aaKnown RBP10.72□□□□□ -0.69
UBE4B-210ENST00000488228 SHBGP04278 402 aa10.72□□□□□ -0.69
UBE4B-210ENST00000488228 JUPP14923 745 aa10.72□□□□□ -0.69
UBE4B-210ENST00000488228 POLR2CP19387 275 aaPredicted RBP10.72□□□□□ -0.69
UBE4B-210ENST00000488228 GCAP28676 217 aa10.72□□□□□ -0.69
UBE4B-210ENST00000488228 SHMT2P34897 504 aa10.72□□□□□ -0.69
UBE4B-210ENST00000488228 SKIV2L2P42285 1042 aaKnown RBP10.72□□□□□ -0.69
UBE4B-210ENST00000488228 INHBCP55103 352 aa10.72□□□□□ -0.69
UBE4B-210ENST00000488228 IL2P60568 153 aa10.72□□□□□ -0.69
UBE4B-210ENST00000488228 RAB10P61026 200 aa10.72□□□□□ -0.69
UBE4B-210ENST00000488228 SLC29A2Q14542 456 aa10.72□□□□□ -0.69
UBE4B-210ENST00000488228 C16orf72Q14CZ0 275 aa10.72□□□□□ -0.69
UBE4B-210ENST00000488228 ZKSCAN8Q15776 578 aaPredicted RBP10.72□□□□□ -0.69
UBE4B-210ENST00000488228 MROH9Q5TGP6 573 aa10.72□□□□□ -0.69
UBE4B-210ENST00000488228 MBOAT1Q6ZNC8 495 aa10.72□□□□□ -0.69
UBE4B-210ENST00000488228 FAM92BQ6ZTR7 304 aa10.72□□□□□ -0.69
UBE4B-210ENST00000488228 AMIGO1Q86WK6 493 aa10.72□□□□□ -0.69
UBE4B-210ENST00000488228 OOSP2Q86WS3 158 aa10.72□□□□□ -0.69
UBE4B-210ENST00000488228 TMPRSS12Q86WS5 348 aa10.72□□□□□ -0.69
UBE4B-210ENST00000488228 GALNT15Q8N3T1 639 aa10.72□□□□□ -0.69
UBE4B-210ENST00000488228 C2orf73Q8N5S3 287 aaPredicted RBP10.72□□□□□ -0.69
UBE4B-210ENST00000488228 DCAKDQ8WVC6 231 aa10.72□□□□□ -0.69
UBE4B-210ENST00000488228 ANKRD49Q8WVL7 239 aa10.72□□□□□ -0.69
UBE4B-210ENST00000488228 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.72□□□□□ -0.69
UBE4B-210ENST00000488228 TSPAN17Q96FV3 270 aa10.72□□□□□ -0.69
UBE4B-210ENST00000488228 PPM1MQ96MI6 270 aa10.72□□□□□ -0.69
UBE4B-210ENST00000488228 MENTQ9BUN1 341 aa10.72□□□□□ -0.69
UBE4B-210ENST00000488228 EPB41L1Q9H4G0 881 aa10.72□□□□□ -0.69
UBE4B-210ENST00000488228 TFB2MQ9H5Q4 396 aaKnown RBP10.72□□□□□ -0.69
UBE4B-210ENST00000488228 GPAMQ9HCL2 828 aa10.72□□□□□ -0.69
UBE4B-210ENST00000488228 HRASLS2Q9NWW9 162 aa10.72□□□□□ -0.69
UBE4B-210ENST00000488228 POLG2Q9UHN1 485 aa10.72□□□□□ -0.69
UBE4B-210ENST00000488228 IKBKGQ9Y6K9 419 aa10.72□□□□□ -0.69
UBE4B-210ENST00000488228 MDC1Q14676 2089 aaKnown RBP10.72□□□□□ -0.69
UBE4B-210ENST00000488228 A0A1W2PNU3 283 aaPredicted RBP10.71□□□□□ -0.69
UBE4B-210ENST00000488228 A8MU76 341 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 MYO1CO00159 1063 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 CAPN5O15484 640 aaPredicted RBP10.71□□□□□ -0.69
UBE4B-210ENST00000488228 SYF2O95926 243 aaKnown RBP10.71□□□□□ -0.69
UBE4B-210ENST00000488228 SLC35E2BP0CK96 405 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 HGFP14210 728 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 STMN1P16949 149 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 PEBP1P30086 187 aaKnown RBP10.71□□□□□ -0.69
UBE4B-210ENST00000488228 CCKBRP32239 447 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 HSD17B3P37058 310 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 CCNFP41002 786 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 MSH2P43246 934 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 SERPINB8P50452 374 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 RAB28P51157 221 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 IRF9Q00978 393 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 PHKG1Q16816 387 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 C3orf38Q5JPI3 329 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 LRRC8EQ6NSJ5 796 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 TMEM71Q6P5X7 295 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 EMBQ6PCB8 327 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms