RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 ZNF414Q96IQ9 312 aa3.29□□□□□ -1.88
CCDC66-221ENST00000487739 SPHK2Q9NRA0 654 aa3.29□□□□□ -1.88
CCDC66-221ENST00000487739 FGF21Q9NSA1 209 aa3.29□□□□□ -1.88
CCDC66-221ENST00000487739 IRAK4Q9NWZ3 460 aa3.29□□□□□ -1.88
CCDC66-221ENST00000487739 THEGQ9P2T0 379 aa3.29□□□□□ -1.88
CCDC66-221ENST00000487739 RHCGQ9UBD6 479 aa3.29□□□□□ -1.88
CCDC66-221ENST00000487739 GTF2A1LQ9UNN4 478 aa3.29□□□□□ -1.88
CCDC66-221ENST00000487739 EXO1Q9UQ84 846 aaKnown RBP3.29□□□□□ -1.88
CCDC66-221ENST00000487739 ANGPTL3Q9Y5C1 460 aa3.29□□□□□ -1.88
CCDC66-221ENST00000487739 ARID4BQ4LE39 1312 aaPredicted RBP3.28□□□□□ -1.88
CCDC66-221ENST00000487739 A0A1W2PR77 199 aa3.28□□□□□ -1.88
CCDC66-221ENST00000487739 HYKKA2RU49 373 aa3.28□□□□□ -1.88
CCDC66-221ENST00000487739 IDH3BO43837 385 aa3.28□□□□□ -1.88
CCDC66-221ENST00000487739 MAGEC1O60732 1142 aa3.28□□□□□ -1.88
CCDC66-221ENST00000487739 RNASEH1O60930 286 aaKnown RBP3.28□□□□□ -1.88
CCDC66-221ENST00000487739 LAMP2P13473 410 aa3.28□□□□□ -1.88
CCDC66-221ENST00000487739 GABRB1P18505 474 aa3.28□□□□□ -1.88
CCDC66-221ENST00000487739 RBMS1P29558 406 aaKnown RBP3.28□□□□□ -1.88
CCDC66-221ENST00000487739 CYCSP99999 105 aaKnown RBP3.28□□□□□ -1.88
CCDC66-221ENST00000487739 DLG2Q15700 870 aa3.28□□□□□ -1.88
CCDC66-221ENST00000487739 Q6ZR54 194 aa3.28□□□□□ -1.88
CCDC66-221ENST00000487739 SMAP2Q8WU79 429 aaPredicted RBP3.28□□□□□ -1.88
CCDC66-221ENST00000487739 ARSGQ96EG1 525 aa3.28□□□□□ -1.88
CCDC66-221ENST00000487739 OR6C1Q96RD1 312 aa3.28□□□□□ -1.88
CCDC66-221ENST00000487739 C16orf70Q9BSU1 422 aa3.28□□□□□ -1.88
CCDC66-221ENST00000487739 NUP85Q9BW27 656 aa3.28□□□□□ -1.88
CCDC66-221ENST00000487739 S1PR5Q9H228 398 aa3.28□□□□□ -1.88
CCDC66-221ENST00000487739 PANK4Q9NVE7 773 aa3.28□□□□□ -1.88
CCDC66-221ENST00000487739 MUTYHQ9UIF7 546 aa3.28□□□□□ -1.88
CCDC66-221ENST00000487739 RARRES3Q9UL19 164 aa3.28□□□□□ -1.88
CCDC66-221ENST00000487739 MTUS1Q9ULD2 1270 aa3.28□□□□□ -1.88
CCDC66-221ENST00000487739 ADAMTS9Q9P2N4 1935 aa3.28□□□□□ -1.88
CCDC66-221ENST00000487739 TDRD15B5MCY1 1934 aaKnown RBP3.27□□□□□ -1.89
CCDC66-221ENST00000487739 IGHV3-13P01766 116 aa3.27□□□□□ -1.89
CCDC66-221ENST00000487739 RB1P06400 928 aa3.27□□□□□ -1.89
CCDC66-221ENST00000487739 IGHV4-31P0DP07 118 aa3.27□□□□□ -1.89
CCDC66-221ENST00000487739 CYP2A7P20853 494 aa3.27□□□□□ -1.89
CCDC66-221ENST00000487739 CHMP24386 653 aa3.27□□□□□ -1.89
CCDC66-221ENST00000487739 ARL3P36405 182 aa3.27□□□□□ -1.89
CCDC66-221ENST00000487739 LEPRP48357 1165 aaKnown RBP3.27□□□□□ -1.89
CCDC66-221ENST00000487739 CDH8P55286 799 aa3.27□□□□□ -1.89
CCDC66-221ENST00000487739 CALCOCO2Q13137 446 aa3.27□□□□□ -1.89
CCDC66-221ENST00000487739 C20orf194Q5TEA3 1177 aa3.27□□□□□ -1.89
CCDC66-221ENST00000487739 EXOC8Q8IYI6 725 aa3.27□□□□□ -1.89
CCDC66-221ENST00000487739 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.27□□□□□ -1.89
CCDC66-221ENST00000487739 NAXEQ8NCW5 288 aa3.27□□□□□ -1.89
CCDC66-221ENST00000487739 PAPD5Q8NDF8 572 aaKnown RBP3.27□□□□□ -1.89
CCDC66-221ENST00000487739 OR13J1Q8NGT2 312 aa3.27□□□□□ -1.89
CCDC66-221ENST00000487739 VANGL1Q8TAA9 524 aaPredicted RBP3.27□□□□□ -1.89
CCDC66-221ENST00000487739 PHLDA1Q8WV24 401 aaPredicted RBP3.27□□□□□ -1.89
CCDC66-221ENST00000487739 CEP295NLQ96MC4 621 aa3.27□□□□□ -1.89
CCDC66-221ENST00000487739 SLC26A6Q9BXS9 759 aa3.27□□□□□ -1.89
CCDC66-221ENST00000487739 ZNF701Q9NV72 531 aaPredicted RBP3.27□□□□□ -1.89
CCDC66-221ENST00000487739 TEX10Q9NXF1 929 aaPredicted RBP3.27□□□□□ -1.89
CCDC66-221ENST00000487739 CACNG4Q9UBN1 327 aa3.27□□□□□ -1.89
CCDC66-221ENST00000487739 GRIP1Q9Y3R0 1128 aa3.27□□□□□ -1.89
CCDC66-221ENST00000487739 TDRD9Q8NDG6 1382 aaKnown RBP3.26□□□□□ -1.89
CCDC66-221ENST00000487739 A0A1W2PPR1 153 aa3.26□□□□□ -1.89
CCDC66-221ENST00000487739 ANKRD61A6NGH8 418 aa3.26□□□□□ -1.89
CCDC66-221ENST00000487739 OR2C1O95371 312 aa3.26□□□□□ -1.89
CCDC66-221ENST00000487739 PAX8Q06710 450 aa3.26□□□□□ -1.89
CCDC66-221ENST00000487739 G3BP1Q13283 466 aaKnown RBP eCLIP3.26□□□□□ -1.89
CCDC66-221ENST00000487739 MOGAT2Q3SYC2 334 aa3.26□□□□□ -1.89
CCDC66-221ENST00000487739 LYSMD4Q5XG99 296 aa3.26□□□□□ -1.89
CCDC66-221ENST00000487739 IKBIPQ70UQ0 350 aa3.26□□□□□ -1.89
CCDC66-221ENST00000487739 COMMD2Q86X83 199 aa3.26□□□□□ -1.89
CCDC66-221ENST00000487739 SMC5Q8IY18 1101 aa3.26□□□□□ -1.89
CCDC66-221ENST00000487739 CFAP206Q8IYR0 622 aa3.26□□□□□ -1.89
CCDC66-221ENST00000487739 Q8NBF4 154 aa3.26□□□□□ -1.89
CCDC66-221ENST00000487739 MOSPD2Q8NHP6 518 aa3.26□□□□□ -1.89
CCDC66-221ENST00000487739 IRGQQ8WZA9 623 aa3.26□□□□□ -1.89
CCDC66-221ENST00000487739 CENPTQ96BT3 561 aa3.26□□□□□ -1.89
CCDC66-221ENST00000487739 PRICKLE1Q96MT3 831 aaPredicted RBP3.26□□□□□ -1.89
CCDC66-221ENST00000487739 GAL3ST4Q96RP7 486 aa3.26□□□□□ -1.89
CCDC66-221ENST00000487739 BTBD10Q9BSF8 475 aa3.26□□□□□ -1.89
CCDC66-221ENST00000487739 LMF2Q9BU23 707 aaKnown RBP3.26□□□□□ -1.89
CCDC66-221ENST00000487739 RTN4RQ9BZR6 473 aa3.26□□□□□ -1.89
CCDC66-221ENST00000487739 CPVLQ9H3G5 476 aa3.26□□□□□ -1.89
CCDC66-221ENST00000487739 OSER1Q9NX31 292 aa3.26□□□□□ -1.89
CCDC66-221ENST00000487739 C9orf78Q9NZ63 289 aaPredicted RBP3.26□□□□□ -1.89
CCDC66-221ENST00000487739 OR6C2Q9NZP2 312 aa3.26□□□□□ -1.89
CCDC66-221ENST00000487739 IGLV3-10A0A075B6K4 115 aa3.25□□□□□ -1.89
CCDC66-221ENST00000487739 MPTX1A8MV57 137 aa3.25□□□□□ -1.89
CCDC66-221ENST00000487739 CDRT15L2A8MXV6 281 aa3.25□□□□□ -1.89
CCDC66-221ENST00000487739 EIF3JO75822 258 aaKnown RBP3.25□□□□□ -1.89
CCDC66-221ENST00000487739 CLTBP09497 229 aa3.25□□□□□ -1.89
CCDC66-221ENST00000487739 VPREB1P12018 145 aa3.25□□□□□ -1.89
CCDC66-221ENST00000487739 PRKACGP22612 351 aa3.25□□□□□ -1.89
CCDC66-221ENST00000487739 LIMK2P53671 638 aa3.25□□□□□ -1.89
CCDC66-221ENST00000487739 TMEM50BP56557 158 aa3.25□□□□□ -1.89
CCDC66-221ENST00000487739 NR1D2Q14995 579 aa3.25□□□□□ -1.89
CCDC66-221ENST00000487739 ITPRIPL2Q3MIP1 535 aa3.25□□□□□ -1.89
CCDC66-221ENST00000487739 PDLIM3Q53GG5 364 aaPredicted RBP3.25□□□□□ -1.89
CCDC66-221ENST00000487739 CHST9Q7L1S5 443 aa3.25□□□□□ -1.89
CCDC66-221ENST00000487739 ADIPOR2Q86V24 386 aa3.25□□□□□ -1.89
CCDC66-221ENST00000487739 POM121L12Q8N7R1 296 aa3.25□□□□□ -1.89
CCDC66-221ENST00000487739 GPRC5AQ8NFJ5 357 aa3.25□□□□□ -1.89
CCDC66-221ENST00000487739 OR6S1Q8NH40 331 aa3.25□□□□□ -1.89
CCDC66-221ENST00000487739 SCFD2Q8WU76 684 aa3.25□□□□□ -1.89
CCDC66-221ENST00000487739 CCDC107Q8WV48 283 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms