RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 SVOPLQ8N434 492 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 C11orf65Q8NCR3 313 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 ZNF540Q8NDQ6 660 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 SNRNP27Q8WVK2 155 aaKnown RBP11.56□□□□□ -0.56
TRA2B-214ENST00000487615 VPS29Q9UBQ0 182 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 TEKT2Q9UIF3 430 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 IKZF3Q9UKT9 509 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 WNT6Q9Y6F9 365 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 RNASEH2AO75792 299 aaKnown RBP11.56□□□□□ -0.56
TRA2B-214ENST00000487615 FGF4P08620 206 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 CYP4B1P13584 511 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 ATF6P18850 670 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 PSMD8P48556 350 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 PRKAG1P54619 331 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 SPANXN4Q5MJ08 99 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 DPY19L3Q6ZPD9 716 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 CHSY3Q70JA7 882 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 SLC15A3Q8IY34 581 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 APCDD1Q8J025 514 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 ZFP28Q8NHY6 868 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 ZNF514Q96K75 400 aaPredicted RBP11.56□□□□□ -0.56
TRA2B-214ENST00000487615 PRRG3Q9BZD7 231 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 IL17CQ9P0M4 197 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 IL36AQ9UHA7 158 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 PSME2Q9UL46 239 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 TRMUO75648 421 aaKnown RBP11.56□□□□□ -0.56
TRA2B-214ENST00000487615 CCNA2P20248 432 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 ACRV1P26436 265 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 TRPC1P48995 793 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 CDKN1CP49918 316 aaPredicted RBP11.56□□□□□ -0.56
TRA2B-214ENST00000487615 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.56□□□□□ -0.56
TRA2B-214ENST00000487615 CNPY1Q3B7I2 92 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 KANK2Q63ZY3 851 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 GET4Q7L5D6 327 aaPredicted RBP11.56□□□□□ -0.56
TRA2B-214ENST00000487615 CMTR2Q8IYT2 770 aaKnown RBP11.56□□□□□ -0.56
TRA2B-214ENST00000487615 ZNF366Q8N895 744 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 OR52B6Q8NGF0 335 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 RAD51AP1Q96B01 352 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 PCTPQ9UKL6 214 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 SORBS2O94875 1100 aaKnown RBP11.56□□□□□ -0.56
TRA2B-214ENST00000487615 SERPINA1P01009 418 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 CSF2RAP15509 400 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 MAGEA12P43365 314 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 NEK2P51955 445 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 INHBCP55103 352 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 C21orf59P57076 290 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 DEFA1P59665 94 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 DEFA3P59666 94 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 SPIBQ01892 262 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 C1DQ13901 141 aaKnown RBP11.56□□□□□ -0.56
TRA2B-214ENST00000487615 PHKG1Q16816 387 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 CCNYL2Q5T2Q4 361 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 MANEALQ5VSG8 457 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 NANOGP8Q6NSW7 305 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 BLOC1S3Q6QNY0 202 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 Q6ZVL8 140 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 ZDHHC21Q8IVQ6 265 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 TCEAL8Q8IYN2 117 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 MINDY1Q8N5J2 469 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 TEX26Q8N6G2 289 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 OR7A2PQ8NGA2 310 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 HM13Q8TCT9 377 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 PAWRQ96IZ0 340 aaKnown RBP11.56□□□□□ -0.56
TRA2B-214ENST00000487615 PLEKHG4BQ96PX9 1271 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 HERC2P3Q9BVR0 1158 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 NANOGQ9H9S0 305 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 PHPT1Q9NRX4 125 aaPredicted RBP11.56□□□□□ -0.56
TRA2B-214ENST00000487615 PTTG2Q9NZH5 202 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 OARD1Q9Y530 152 aa11.56□□□□□ -0.56
TRA2B-214ENST00000487615 ADAM12O43184 909 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 FABP3P05413 133 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 ZNF140P52738 457 aaPredicted RBP11.55□□□□□ -0.56
TRA2B-214ENST00000487615 CYP4F2P78329 520 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 FAM189BP81408 668 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 PRKCQQ04759 706 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 LAPTM5Q13571 262 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 NADSYN1Q6IA69 706 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 TLDC1Q6P9B6 456 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 ARHGAP22Q7Z5H3 698 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 PIANPQ8IYJ0 282 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 CHCHD4Q8N4Q1 142 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 CPA6Q8N4T0 437 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 C2orf73Q8N5S3 287 aaPredicted RBP11.55□□□□□ -0.56
TRA2B-214ENST00000487615 BEND7Q8N7W2 519 aaPredicted RBP11.55□□□□□ -0.56
TRA2B-214ENST00000487615 IRF7Q92985 503 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 DUSP26Q9BV47 211 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 OR2AG1Q9H205 316 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 CCNB1IP1Q9NPC3 277 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 IMP3Q9NV31 184 aaKnown RBP11.55□□□□□ -0.56
TRA2B-214ENST00000487615 KLHL20Q9Y2M5 609 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 PRORSD1PA6NEY8 169 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 MROH6A6NGR9 719 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 UGT2B11O75310 529 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 IGLV3-25P01717 112 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 FESP07332 822 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 SOX6P35712 828 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 RGRP47804 291 aa11.55□□□□□ -0.56
TRA2B-214ENST00000487615 MANFP55145 182 aaKnown RBP11.55□□□□□ -0.56
TRA2B-214ENST00000487615 ADARP55265 1226 aaKnown RBP11.55□□□□□ -0.56
TRA2B-214ENST00000487615 CDC42P60953 191 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms