RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 C9J4A7 227 aa12.04□□□□□ -0.48
SREBF1-215ENST00000487401 BHMG1C9JSJ3 638 aaPredicted RBP12.04□□□□□ -0.48
SREBF1-215ENST00000487401 ZNF749O43361 778 aa12.04□□□□□ -0.48
SREBF1-215ENST00000487401 DNAJB5O75953 348 aa12.04□□□□□ -0.48
SREBF1-215ENST00000487401 CHRM5P08912 532 aaPredicted RBP12.04□□□□□ -0.48
SREBF1-215ENST00000487401 ETS1P14921 441 aa12.04□□□□□ -0.48
SREBF1-215ENST00000487401 UGT2B7P16662 529 aa12.04□□□□□ -0.48
SREBF1-215ENST00000487401 RORAP35398 523 aa12.04□□□□□ -0.48
SREBF1-215ENST00000487401 GRIA1P42261 906 aa12.04□□□□□ -0.48
SREBF1-215ENST00000487401 PGDP52209 483 aa12.04□□□□□ -0.48
SREBF1-215ENST00000487401 CSE1LP55060 971 aaKnown RBP12.04□□□□□ -0.48
SREBF1-215ENST00000487401 IL10RAQ13651 578 aa12.04□□□□□ -0.48
SREBF1-215ENST00000487401 DNAJC21Q5F1R6 531 aaKnown RBP12.04□□□□□ -0.48
SREBF1-215ENST00000487401 AARS2Q5JTZ9 985 aaKnown RBP12.04□□□□□ -0.48
SREBF1-215ENST00000487401 ZNF517Q6ZMY9 492 aaPredicted RBP12.04□□□□□ -0.48
SREBF1-215ENST00000487401 CDHR3Q6ZTQ4 885 aa12.04□□□□□ -0.48
SREBF1-215ENST00000487401 PRUNE1Q86TP1 453 aa12.04□□□□□ -0.48
SREBF1-215ENST00000487401 C19orf47Q8N9M1 422 aaKnown RBP12.04□□□□□ -0.48
SREBF1-215ENST00000487401 PPHLN1Q8NEY8 458 aaKnown RBP12.04□□□□□ -0.48
SREBF1-215ENST00000487401 OR5K2Q8NHB8 316 aa12.04□□□□□ -0.48
SREBF1-215ENST00000487401 DPH2Q9BQC3 489 aaPredicted RBP12.04□□□□□ -0.48
SREBF1-215ENST00000487401 SLC25A23Q9BV35 468 aa12.04□□□□□ -0.48
SREBF1-215ENST00000487401 TRIM55Q9BYV6 548 aa12.04□□□□□ -0.48
SREBF1-215ENST00000487401 ING2Q9H160 280 aa12.04□□□□□ -0.48
SREBF1-215ENST00000487401 CASS4Q9NQ75 786 aa12.04□□□□□ -0.48
SREBF1-215ENST00000487401 IRAK4Q9NWZ3 460 aa12.04□□□□□ -0.48
SREBF1-215ENST00000487401 TCFL5Q9UL49 500 aa12.04□□□□□ -0.48
SREBF1-215ENST00000487401 G3BP2Q9UN86 482 aaKnown RBP12.04□□□□□ -0.48
SREBF1-215ENST00000487401 TCAF1Q9Y4C2 921 aa12.04□□□□□ -0.48
SREBF1-215ENST00000487401 AP1M2Q9Y6Q5 423 aa12.04□□□□□ -0.48
SREBF1-215ENST00000487401 A0A0J9YY10 115 aa12.03□□□□□ -0.48
SREBF1-215ENST00000487401 ISM1B1AKI9 464 aa12.03□□□□□ -0.48
SREBF1-215ENST00000487401 OR2B3O76000 313 aa12.03□□□□□ -0.48
SREBF1-215ENST00000487401 HSPA14Q0VDF9 509 aa12.03□□□□□ -0.48
SREBF1-215ENST00000487401 CHAF1BQ13112 559 aa12.03□□□□□ -0.48
SREBF1-215ENST00000487401 CCNG2Q16589 344 aa12.03□□□□□ -0.48
SREBF1-215ENST00000487401 PTCHD3Q3KNS1 767 aa12.03□□□□□ -0.48
SREBF1-215ENST00000487401 ZNF789Q5FWF6 425 aa12.03□□□□□ -0.48
SREBF1-215ENST00000487401 CPZQ66K79 652 aa12.03□□□□□ -0.48
SREBF1-215ENST00000487401 C4orf22Q6V702 233 aa12.03□□□□□ -0.48
SREBF1-215ENST00000487401 GSTA5Q7RTV2 222 aa12.03□□□□□ -0.48
SREBF1-215ENST00000487401 ATCAYQ86WG3 371 aa12.03□□□□□ -0.48
SREBF1-215ENST00000487401 CFAP61Q8NHU2 1237 aa12.03□□□□□ -0.48
SREBF1-215ENST00000487401 GSDMBQ8TAX9 411 aa12.03□□□□□ -0.48
SREBF1-215ENST00000487401 ASZ1Q8WWH4 475 aa12.03□□□□□ -0.48
SREBF1-215ENST00000487401 OR2A14Q96R47 310 aa12.03□□□□□ -0.48
SREBF1-215ENST00000487401 C17orf62Q9BQA9 187 aa12.03□□□□□ -0.48
SREBF1-215ENST00000487401 SPHK1Q9NYA1 384 aa12.03□□□□□ -0.48
SREBF1-215ENST00000487401 GPN3Q9UHW5 284 aaPredicted RBP12.03□□□□□ -0.48
SREBF1-215ENST00000487401 PLAGL1Q9UM63 463 aa12.03□□□□□ -0.48
SREBF1-215ENST00000487401 PLAAQ9Y263 795 aa12.03□□□□□ -0.48
SREBF1-215ENST00000487401 PADI2Q9Y2J8 665 aa12.03□□□□□ -0.48
SREBF1-215ENST00000487401 AP3B1O00203 1094 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 TMEM63AO94886 807 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 RPN2P04844 631 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 APOA4P06727 396 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 ZSCAN5DPP0CG00 497 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 ATXN8OSP0DMR3 200 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 CCR7P32248 378 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 RPL22P35268 128 aaKnown RBP12.02□□□□□ -0.49
SREBF1-215ENST00000487401 PTGIRP43119 386 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 MLLT10P55197 1068 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 SESN2P58004 480 aaPredicted RBP12.02□□□□□ -0.49
SREBF1-215ENST00000487401 ACVR1Q04771 509 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 UBAP2LQ14157 1087 aaKnown RBP12.02□□□□□ -0.49
SREBF1-215ENST00000487401 KIR2DS3Q14952 304 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 NCF4Q15080 339 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 TMED2Q15363 201 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 ZIC1Q15915 447 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 SLC5A12Q1EHB4 618 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 PCID2Q5JVF3 399 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 MEI1Q5TIA1 1274 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 C1orf189Q5VU69 101 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 MLIPQ5VWP3 458 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 PTRHD1Q6GMV3 140 aaKnown RBP12.02□□□□□ -0.49
SREBF1-215ENST00000487401 FAM198BQ6UWH4 519 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 ZNF534Q76KX8 674 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 RAB43Q86YS6 212 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 MAIP1Q8WWC4 291 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 PEX13Q92968 403 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 SGSM3Q96HU1 749 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 ZNF778Q96MU6 729 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 DHRS4Q9BTZ2 278 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 CARD6Q9BX69 1037 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 AP1M1Q9BXS5 423 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 CHRNA10Q9GZZ6 450 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 SPRTNQ9H040 489 aaPredicted RBP12.02□□□□□ -0.49
SREBF1-215ENST00000487401 FAM60AQ9NP50 221 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 CHRAC1Q9NRG0 131 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 CATSPERZQ9NTU4 200 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 BFARQ9NZS9 450 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 DRG1Q9Y295 367 aaKnown RBP12.02□□□□□ -0.49
SREBF1-215ENST00000487401 ZNF451Q9Y4E5 1061 aa12.02□□□□□ -0.49
SREBF1-215ENST00000487401 PCDHGA9Q9Y5G4 932 aaKnown RBP12.02□□□□□ -0.49
SREBF1-215ENST00000487401 A6NL46 340 aa12.01□□□□□ -0.49
SREBF1-215ENST00000487401 TTLL8A6PVC2 850 aa12.01□□□□□ -0.49
SREBF1-215ENST00000487401 PRMT5O14744 637 aaPredicted RBP12.01□□□□□ -0.49
SREBF1-215ENST00000487401 CD3EAPO15446 510 aaKnown RBP12.01□□□□□ -0.49
SREBF1-215ENST00000487401 NDUFS3O75489 264 aa12.01□□□□□ -0.49
SREBF1-215ENST00000487401 PDGFAP04085 211 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms