RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.77■□□□□ 0.6
SMPDL3A-202ENST00000487215 PTERQ96BW5 349 aa18.77■□□□□ 0.6
SMPDL3A-202ENST00000487215 AP1M1Q9BXS5 423 aa18.77■□□□□ 0.6
SMPDL3A-202ENST00000487215 VPS37BQ9H9H4 285 aa18.77■□□□□ 0.6
SMPDL3A-202ENST00000487215 AGPAT4Q9NRZ5 378 aa18.77■□□□□ 0.6
SMPDL3A-202ENST00000487215 ZNHIT6Q9NWK9 470 aaKnown RBP18.77■□□□□ 0.6
SMPDL3A-202ENST00000487215 ZDHHC3Q9NYG2 299 aa18.77■□□□□ 0.6
SMPDL3A-202ENST00000487215 CSAG2Q9Y5P2 127 aa18.77■□□□□ 0.6
SMPDL3A-202ENST00000487215 ABCA12Q86UK0 2595 aa18.76■□□□□ 0.59
SMPDL3A-202ENST00000487215 ZSCAN9O15535 394 aaPredicted RBP18.76■□□□□ 0.59
SMPDL3A-202ENST00000487215 CDKN1CP49918 316 aaPredicted RBP18.76■□□□□ 0.59
SMPDL3A-202ENST00000487215 TCEAL1Q15170 157 aa18.76■□□□□ 0.59
SMPDL3A-202ENST00000487215 CYP2A13Q16696 494 aa18.76■□□□□ 0.59
SMPDL3A-202ENST00000487215 NKAIN1Q4KMZ8 207 aa18.76■□□□□ 0.59
SMPDL3A-202ENST00000487215 ITPRIPL1Q6GPH6 555 aa18.76■□□□□ 0.59
SMPDL3A-202ENST00000487215 SRRM1Q8IYB3 904 aaKnown RBP18.76■□□□□ 0.59
SMPDL3A-202ENST00000487215 ZNF655Q8N720 491 aaPredicted RBP18.76■□□□□ 0.59
SMPDL3A-202ENST00000487215 OR2A14Q96R47 310 aa18.76■□□□□ 0.59
SMPDL3A-202ENST00000487215 WDR77Q9BQA1 342 aaPredicted RBP18.76■□□□□ 0.59
SMPDL3A-202ENST00000487215 CHRNA10Q9GZZ6 450 aa18.76■□□□□ 0.59
SMPDL3A-202ENST00000487215 GOLPH3Q9H4A6 298 aa18.76■□□□□ 0.59
SMPDL3A-202ENST00000487215 NHEJ1Q9H9Q4 299 aaPredicted RBP18.76■□□□□ 0.59
SMPDL3A-202ENST00000487215 ATP13A2Q9NQ11 1180 aa18.76■□□□□ 0.59
SMPDL3A-202ENST00000487215 TXLNGQ9NUQ3 528 aa18.76■□□□□ 0.59
SMPDL3A-202ENST00000487215 SRPK3Q9UPE1 567 aa18.76■□□□□ 0.59
SMPDL3A-202ENST00000487215 PSMB4P28070 264 aa18.75■□□□□ 0.59
SMPDL3A-202ENST00000487215 MC4RP32245 332 aa18.75■□□□□ 0.59
SMPDL3A-202ENST00000487215 SHMT2P34897 504 aa18.75■□□□□ 0.59
SMPDL3A-202ENST00000487215 MARCKSL1P49006 195 aa18.75■□□□□ 0.59
SMPDL3A-202ENST00000487215 TRIM14Q14142 442 aa18.75■□□□□ 0.59
SMPDL3A-202ENST00000487215 ZNF449Q6P9G9 518 aa18.75■□□□□ 0.59
SMPDL3A-202ENST00000487215 UNC5AQ6ZN44 842 aa18.75■□□□□ 0.59
SMPDL3A-202ENST00000487215 KCNMB4Q86W47 210 aa18.75■□□□□ 0.59
SMPDL3A-202ENST00000487215 CCDC50Q8IVM0 306 aa18.75■□□□□ 0.59
SMPDL3A-202ENST00000487215 KATNAL2Q8IYT4 538 aa18.75■□□□□ 0.59
SMPDL3A-202ENST00000487215 SLC34A3Q8N130 599 aa18.75■□□□□ 0.59
SMPDL3A-202ENST00000487215 OR5AR1Q8NGP9 310 aa18.75■□□□□ 0.59
SMPDL3A-202ENST00000487215 FLVCR1-AS1Q8TAF5 88 aa18.75■□□□□ 0.59
SMPDL3A-202ENST00000487215 CCDC42Q96M95 316 aa18.75■□□□□ 0.59
SMPDL3A-202ENST00000487215 C19orf43Q9BQ61 176 aa18.75■□□□□ 0.59
SMPDL3A-202ENST00000487215 ABHD10Q9NUJ1 306 aa18.75■□□□□ 0.59
SMPDL3A-202ENST00000487215 SPHK1Q9NYA1 384 aa18.75■□□□□ 0.59
SMPDL3A-202ENST00000487215 NOVA2Q9UNW9 492 aaKnown RBP18.75■□□□□ 0.59
SMPDL3A-202ENST00000487215 CROCCQ5TZA2 2017 aa18.74■□□□□ 0.59
SMPDL3A-202ENST00000487215 TRBV5-4A0A0C4DH59 114 aa18.74■□□□□ 0.59
SMPDL3A-202ENST00000487215 A0A0J9YY10 115 aa18.74■□□□□ 0.59
SMPDL3A-202ENST00000487215 H7C0C1 242 aa18.74■□□□□ 0.59
SMPDL3A-202ENST00000487215 AGPSO00116 658 aa18.74■□□□□ 0.59
SMPDL3A-202ENST00000487215 E2F3O00716 465 aa18.74■□□□□ 0.59
SMPDL3A-202ENST00000487215 ZRANB2O95218 330 aaKnown RBP eCLIP18.74■□□□□ 0.59
SMPDL3A-202ENST00000487215 CHRM5P08912 532 aaPredicted RBP18.74■□□□□ 0.59
SMPDL3A-202ENST00000487215 PRSS56P0CW18 603 aa18.74■□□□□ 0.59
SMPDL3A-202ENST00000487215 ITGA3P26006 1051 aa18.74■□□□□ 0.59
SMPDL3A-202ENST00000487215 ACRV1P26436 265 aa18.74■□□□□ 0.59
SMPDL3A-202ENST00000487215 ATP5OP48047 213 aa18.74■□□□□ 0.59
SMPDL3A-202ENST00000487215 AIMP2Q13155 320 aaKnown RBP18.74■□□□□ 0.59
SMPDL3A-202ENST00000487215 HIF1AQ16665 826 aa18.74■□□□□ 0.59
SMPDL3A-202ENST00000487215 GPR33Q49SQ1 333 aa18.74■□□□□ 0.59
SMPDL3A-202ENST00000487215 TLDC1Q6P9B6 456 aa18.74■□□□□ 0.59
SMPDL3A-202ENST00000487215 BBS12Q6ZW61 710 aa18.74■□□□□ 0.59
SMPDL3A-202ENST00000487215 SERPINA9Q86WD7 417 aa18.74■□□□□ 0.59
SMPDL3A-202ENST00000487215 CLDN19Q8N6F1 224 aa18.74■□□□□ 0.59
SMPDL3A-202ENST00000487215 PPP4R1Q8TF05 950 aa18.74■□□□□ 0.59
SMPDL3A-202ENST00000487215 SLC22A11Q9NSA0 550 aa18.74■□□□□ 0.59
SMPDL3A-202ENST00000487215 IRAK4Q9NWZ3 460 aa18.74■□□□□ 0.59
SMPDL3A-202ENST00000487215 AAR2Q9Y312 384 aaKnown RBP18.74■□□□□ 0.59
SMPDL3A-202ENST00000487215 ALG6Q9Y672 507 aa18.74■□□□□ 0.59
SMPDL3A-202ENST00000487215 SEC16AO15027 2179 aa18.74■□□□□ 0.59
SMPDL3A-202ENST00000487215 APOC4-APOC2K7ER74 178 aa18.73■□□□□ 0.59
SMPDL3A-202ENST00000487215 LRRTM2O43300 516 aa18.73■□□□□ 0.59
SMPDL3A-202ENST00000487215 CBFA2T2O43439 604 aa18.73■□□□□ 0.59
SMPDL3A-202ENST00000487215 ALOX12BO75342 701 aa18.73■□□□□ 0.59
SMPDL3A-202ENST00000487215 APOC2P02655 101 aa18.73■□□□□ 0.59
SMPDL3A-202ENST00000487215 TPM1P09493 284 aa18.73■□□□□ 0.59
SMPDL3A-202ENST00000487215 TPBGLP0DKB5 382 aa18.73■□□□□ 0.59
SMPDL3A-202ENST00000487215 DENND5AQ6IQ26 1287 aa18.73■□□□□ 0.59
SMPDL3A-202ENST00000487215 RCOR2Q8IZ40 523 aa18.73■□□□□ 0.59
SMPDL3A-202ENST00000487215 DNAJC22Q8N4W6 341 aa18.73■□□□□ 0.59
SMPDL3A-202ENST00000487215 DNAJC1Q96KC8 554 aaKnown RBP18.73■□□□□ 0.59
SMPDL3A-202ENST00000487215 HEMGNQ9BXL5 484 aa18.73■□□□□ 0.59
SMPDL3A-202ENST00000487215 SLC6A20Q9NP91 592 aa18.73■□□□□ 0.59
SMPDL3A-202ENST00000487215 FBXL4Q9UKA2 621 aa18.73■□□□□ 0.59
SMPDL3A-202ENST00000487215 INTUQ9ULD6 942 aa18.73■□□□□ 0.59
SMPDL3A-202ENST00000487215 OSGIN2Q9Y236 505 aa18.73■□□□□ 0.59
SMPDL3A-202ENST00000487215 ASF1AQ9Y294 204 aa18.73■□□□□ 0.59
SMPDL3A-202ENST00000487215 CSMD1Q96PZ7 3565 aa18.73■□□□□ 0.59
SMPDL3A-202ENST00000487215 GSTM1P09488 218 aa18.72■□□□□ 0.59
SMPDL3A-202ENST00000487215 PRF1P14222 555 aa18.72■□□□□ 0.59
SMPDL3A-202ENST00000487215 PER3P56645 1201 aa18.72■□□□□ 0.59
SMPDL3A-202ENST00000487215 GSTM4Q03013 218 aa18.72■□□□□ 0.59
SMPDL3A-202ENST00000487215 PRPSAP1Q14558 356 aa18.72■□□□□ 0.59
SMPDL3A-202ENST00000487215 ANKRD20A2Q5SQ80 823 aa18.72■□□□□ 0.59
SMPDL3A-202ENST00000487215 ANKRD20A1Q5TYW2 823 aa18.72■□□□□ 0.59
SMPDL3A-202ENST00000487215 ANKRD20A3Q5VUR7 823 aa18.72■□□□□ 0.59
SMPDL3A-202ENST00000487215 GRHL3Q8TE85 626 aa18.72■□□□□ 0.59
SMPDL3A-202ENST00000487215 NDC1Q9BTX1 674 aa18.72■□□□□ 0.59
SMPDL3A-202ENST00000487215 OR6C2Q9NZP2 312 aa18.72■□□□□ 0.59
SMPDL3A-202ENST00000487215 PLCL2Q9UPR0 1127 aa18.72■□□□□ 0.59
SMPDL3A-202ENST00000487215 PCM1Q15154 2024 aa18.72■□□□□ 0.59
SMPDL3A-202ENST00000487215 TEP1Q99973 2627 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms