RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 KMT5CQ86Y97 462 aa4.75□□□□□ -1.65
PRPF38A-203ENST00000487160 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.75□□□□□ -1.65
PRPF38A-203ENST00000487160 OXNAD1Q96HP4 312 aaPredicted RBP4.75□□□□□ -1.65
PRPF38A-203ENST00000487160 ZNF558Q96NG5 402 aa4.75□□□□□ -1.65
PRPF38A-203ENST00000487160 WNT5BQ9H1J7 359 aa4.75□□□□□ -1.65
PRPF38A-203ENST00000487160 GRPEL1Q9HAV7 217 aa4.75□□□□□ -1.65
PRPF38A-203ENST00000487160 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.75□□□□□ -1.655e-7■■■■□ 25.2
PRPF38A-203ENST00000487160 PNPLA6Q8IY17 1366 aa4.75□□□□□ -1.65
PRPF38A-203ENST00000487160 PLEKHG1Q9ULL1 1385 aa4.75□□□□□ -1.65
PRPF38A-203ENST00000487160 SOS1Q07889 1333 aaPredicted RBP4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 CGNL1Q0VF96 1302 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 E9PCH4 1651 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 NOS1P29475 1434 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 DCCP43146 1447 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 ELOVL7A1L3X0 281 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 MAGEA13PA6NCF6 341 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 C5orf60A6NFR6 353 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 C15orf62A8K5M9 175 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 INO80B-WBP1J3KQ70 363 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 OVOL3O00110 214 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 LDLRP01130 860 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 RPN1P04843 607 aaKnown RBP4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 OR2T7P0C7T2 308 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 CDH1P12830 882 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 GP5P40197 560 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 PSMC4P43686 418 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 NPY4RP50391 375 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 DSCR9P59020 149 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 EEF1A1P68104 462 aaKnown RBP4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 ACSM1Q08AH1 577 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 PNRC1Q12796 327 aaPredicted RBP4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 ZBTB17Q13105 803 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 PPIGQ13427 754 aaKnown RBP eCLIP4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 ZNF273Q14593 569 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 EEF1A1P5Q5VTE0 462 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 PLA2G4FQ68DD2 849 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 FAM171BQ6P995 826 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 PLXDC2Q6UX71 529 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 ADCK2Q7Z695 626 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 MOSPD2Q8NHP6 518 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 GOT1L1Q8NHS2 421 aaPredicted RBP4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 DAZLQ92904 295 aaKnown RBP4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 SLAMF9Q96A28 289 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 ZBTB9Q96C00 473 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 RTP4Q96DX8 246 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 MTERF3Q96E29 417 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 BICD1Q96G01 975 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 NEURL2Q9BR09 285 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 ZPBPQ9BS86 351 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 TM6SF1Q9BZW5 370 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 ZWILCHQ9H900 591 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 TRPC7Q9HCX4 862 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 DPP3Q9NY33 737 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 DLGAP4Q9Y2H0 992 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 LIPGQ9Y5X9 500 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 PTPN23Q9H3S7 1636 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 KIF15Q9NS87 1388 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 GLI3P10071 1580 aa4.74□□□□□ -1.65
PRPF38A-203ENST00000487160 PLCH1Q4KWH8 1693 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 ATRNO75882 1429 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 ADAMTS13Q76LX8 1427 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 RIMS2Q9UQ26 1411 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 TRIP12Q14669 1992 aaPredicted RBP4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 IQGAP3Q86VI3 1631 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 RGPD1P0DJD0 1748 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 TEX13DA0A0J9YY54 714 aaPredicted RBP4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 TMEM221A6NGB7 291 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 DVL1O14640 695 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 OR10H2O60403 315 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 TFAP2AP05549 437 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 LIPFP07098 398 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 CYP11B2P19099 503 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 HSPA4P34932 840 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 MTHFRP42898 656 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 NDUFAF5Q5TEU4 345 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 IRAK1BP1Q5VVH5 260 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 CAVIN1Q6NZI2 390 aaKnown RBP4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 KLC3Q6P597 504 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 PPP1R21Q6ZMI0 780 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 TMPRSS11FQ6ZWK6 438 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 DGLUCYQ7Z3D6 616 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 METTL23Q86XA0 190 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 PTOV1Q86YD1 416 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 SPATA2LQ8IUW3 424 aaPredicted RBP4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 MFN1Q8IWA4 741 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 FAM114A1Q8IWE2 563 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 CEP57L1Q8IYX8 460 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 OR8H3Q8N146 312 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 CCAR2Q8N163 923 aaKnown RBP4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 IQUBQ8NA54 791 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 KCNH5Q8NCM2 988 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 OR5M8Q8NGP6 311 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 LINGO1Q96FE5 620 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 TTC14Q96N46 770 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 SEPHS2Q99611 448 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 SLX1AQ9BQ83 275 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 ALDH8A1Q9H2A2 487 aaPredicted RBP4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 CHCHD3Q9NX63 227 aaKnown RBP4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 POU2F3Q9UKI9 436 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 GTF3C4Q9UKN8 822 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms