RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 SPATA19Q7Z5L4 167 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 PRRG3Q9BZD7 231 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 SYTL2Q9HCH5 934 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 SPATA7Q9P0W8 599 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 PCDHGA3Q9Y5H0 932 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 NINQ8N4C6 2090 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 SMIM35A0A1B0GVV1 85 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 VPS26AO75436 327 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 CREG1O75629 220 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 CPSF4O95639 269 aaKnown RBP12.14□□□□□ -0.47
HSPG2-211ENST00000486901 RPS17P08708 135 aaKnown RBP12.14□□□□□ -0.47
HSPG2-211ENST00000486901 TACR1P25103 407 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 PPP2R2BQ00005 443 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 ARHGEF7Q14155 803 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 VARS2Q5ST30 1063 aaKnown RBP12.14□□□□□ -0.47
HSPG2-211ENST00000486901 MFSD4BQ5TF39 518 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 MSANTD2Q6P1R3 559 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 SUSD1Q6UWL2 747 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 ZDHHC21Q8IVQ6 265 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 MSRB3Q8IXL7 192 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 SLC16A10Q8TF71 515 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 Q96MT0 163 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 KCNC2Q96PR1 638 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 KCNS3Q9BQ31 491 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 UGT2B28Q9BY64 529 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 TM6SF2Q9BZW4 377 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 NACA2Q9H009 215 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 TP63Q9H3D4 680 aaPredicted RBP12.14□□□□□ -0.47
HSPG2-211ENST00000486901 SCUBE2Q9NQ36 999 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 TRMT13Q9NUP7 481 aaKnown RBP12.14□□□□□ -0.47
HSPG2-211ENST00000486901 FLRT1Q9NZU1 646 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 C3orf18Q9UK00 162 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 EIF3LQ9Y262 564 aaKnown RBP12.14□□□□□ -0.47
HSPG2-211ENST00000486901 NOX1Q9Y5S8 564 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 PTCH2Q9Y6C5 1203 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 MGEA5O60502 916 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 PCMT1P22061 227 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 TGM1P22735 817 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 TAF1CQ15572 869 aaPredicted RBP12.13□□□□□ -0.47
HSPG2-211ENST00000486901 SLC14A2Q15849 920 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 UPP1Q16831 310 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 RBM48Q5RL73 367 aaKnown RBP12.13□□□□□ -0.47
HSPG2-211ENST00000486901 MANEALQ5VSG8 457 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 RSBN1Q5VWQ0 802 aaPredicted RBP12.13□□□□□ -0.47
HSPG2-211ENST00000486901 DESI1Q6ICB0 168 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 ZCCHC8Q6NZY4 707 aaKnown RBP12.13□□□□□ -0.47
HSPG2-211ENST00000486901 LIMS2Q7Z4I7 341 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 MFSD4AQ8N468 514 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 ULK4Q96C45 1275 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 TUBA1CQ9BQE3 449 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 CHCHD6Q9BRQ6 235 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 MRM3Q9HC36 420 aaKnown RBP12.13□□□□□ -0.47
HSPG2-211ENST00000486901 TMEFF2Q9UIK5 374 aaPredicted RBP12.13□□□□□ -0.47
HSPG2-211ENST00000486901 C17orf102A2RUQ5 167 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 EFCAB9A8MZ26 197 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 PFDN6O15212 129 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 WISP3O95389 354 aaPredicted RBP12.13□□□□□ -0.47
HSPG2-211ENST00000486901 OPN1SWP03999 348 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 PGRP06401 933 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 PKMP14618 531 aaKnown RBP12.13□□□□□ -0.47
HSPG2-211ENST00000486901 CD40LGP29965 261 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 RACK1P63244 317 aaKnown RBP12.13□□□□□ -0.47
HSPG2-211ENST00000486901 STEAP3Q658P3 488 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 DOK6Q6PKX4 331 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 PIK3C3Q8NEB9 887 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 GTF2H4Q92759 462 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 RHBDF1Q96CC6 855 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 DCSTAMPQ9H295 470 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 ADARB2Q9NS39 739 aaKnown RBP12.13□□□□□ -0.47
HSPG2-211ENST00000486901 GPRC5BQ9NZH0 403 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 COL1A2P08123 1366 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 STX7O15400 261 aaKnown RBP12.13□□□□□ -0.47
HSPG2-211ENST00000486901 AKT1P31749 480 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 ZNF157P51786 506 aaPredicted RBP12.13□□□□□ -0.47
HSPG2-211ENST00000486901 PHC1P78364 1004 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 PWP1Q13610 501 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 GTF2H2Q13888 395 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 XKR7Q5GH72 579 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 CTSL3PQ5NE16 218 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.13□□□□□ -0.47
HSPG2-211ENST00000486901 GTF2H2CQ6P1K8 395 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 ZNF280BQ86YH2 543 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 ZNF548Q8NEK5 533 aaPredicted RBP12.13□□□□□ -0.47
HSPG2-211ENST00000486901 BRSK1Q8TDC3 778 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 ZBTB18Q99592 522 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 RBM4BQ9BQ04 359 aaKnown RBP12.13□□□□□ -0.47
HSPG2-211ENST00000486901 RBM4Q9BWF3 364 aaKnown RBP12.13□□□□□ -0.47
HSPG2-211ENST00000486901 AP5M1Q9H0R1 490 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 NYNRINQ9P2P1 1898 aaKnown RBP12.13□□□□□ -0.47
HSPG2-211ENST00000486901 ZNF490Q9ULM2 529 aaPredicted RBP12.13□□□□□ -0.47
HSPG2-211ENST00000486901 DLGAP4Q9Y2H0 992 aa12.13□□□□□ -0.47
HSPG2-211ENST00000486901 OR7A17O14581 309 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 TNPO2O14787 897 aaKnown RBP12.12□□□□□ -0.47
HSPG2-211ENST00000486901 CYP11A1P05108 521 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 LIPAP38571 399 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 OR1G1P47890 313 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 CLK3P49761 638 aaKnown RBP12.12□□□□□ -0.47
HSPG2-211ENST00000486901 NFKB2Q00653 900 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 CREMQ03060 361 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 LRRC73Q5JTD7 316 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms