RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 DAOAP59103 153 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 FBXO47Q5MNV8 452 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 KDELC1Q6UW63 502 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 CATSPERGQ6ZRH7 1159 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 GPR149Q86SP6 731 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 GLRX5Q86SX6 157 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 TSPYL5Q86VY4 417 aaPredicted RBP10.44□□□□□ -0.74
CCDC171-208ENST00000486641 OSTM1Q86WC4 334 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 HORMAD1Q86X24 394 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 CDYL2Q8N8U2 506 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 OR52E4Q8NGH9 312 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 STAG3L4Q8TBR4 150 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 TTC9Q92623 222 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 DNASE1L2Q92874 299 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 RIPOR3Q96MK2 946 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 CDK15Q96Q40 435 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 HBEGFQ99075 208 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 KCNS3Q9BQ31 491 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 BEX2Q9BXY8 128 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 MKRN2Q9H000 416 aaKnown RBP10.44□□□□□ -0.74
CCDC171-208ENST00000486641 SIK2Q9H0K1 926 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 MAGIXQ9H6Y5 334 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 TMEM45AQ9NWC5 275 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 SLC25A37Q9NYZ2 338 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 NUFIP1Q9UHK0 495 aaKnown RBP10.44□□□□□ -0.74
CCDC171-208ENST00000486641 PCNTO95613 3336 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 ARVCFO00192 962 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 PDHXO00330 501 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 TFECO14948 347 aaPredicted RBP10.43□□□□□ -0.74
CCDC171-208ENST00000486641 POLR1CO15160 346 aaPredicted RBP10.43□□□□□ -0.74
CCDC171-208ENST00000486641 TLL1O43897 1013 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 KERAO60938 352 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 CPNE3O75131 537 aaKnown RBP10.43□□□□□ -0.74
CCDC171-208ENST00000486641 UGT2B17O75795 530 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 FKBP9O95302 570 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 USP17L7P0C7H9 530 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 TXNP10599 105 aaKnown RBP10.43□□□□□ -0.74
CCDC171-208ENST00000486641 ITGA2P17301 1181 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 EDNRBP24530 442 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 NRG1Q02297 640 aaPredicted RBP10.43□□□□□ -0.74
CCDC171-208ENST00000486641 FCHO2Q0JRZ9 810 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 GTF2H3Q13889 308 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 KIAA0040Q15053 153 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 TRIM71Q2Q1W2 868 aaKnown RBP10.43□□□□□ -0.74
CCDC171-208ENST00000486641 GPRIN1Q7Z2K8 1008 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 MSRB3Q8IXL7 192 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 PGBD5Q8N414 524 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 FAM109AQ8N4B1 249 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 LSMEM1Q8N8F7 131 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 MTMR14Q8NCE2 650 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 APPL2Q8NEU8 664 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 KBTBD8Q8NFY9 601 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 GTF2H4Q92759 462 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 COPS5Q92905 334 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 SNAPC3Q92966 411 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 KIAA1191Q96A73 305 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 RMDN1Q96DB5 314 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 PGAP3Q96FM1 320 aaPredicted RBP10.43□□□□□ -0.74
CCDC171-208ENST00000486641 PYURFQ96I23 114 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 TBATAQ96M53 351 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 SPATA33Q96N06 139 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 TRNT1Q96Q11 434 aaKnown RBP10.43□□□□□ -0.74
CCDC171-208ENST00000486641 CHCHD6Q9BRQ6 235 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 COPS4Q9BT78 406 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 CCDC32Q9BV29 185 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 ROGDIQ9GZN7 287 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 ARNT2Q9HBZ2 717 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 HEBP1Q9NRV9 189 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 NDFIP2Q9NV92 336 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 CSADQ9Y600 493 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 PLXNA1Q9UIW2 1896 aa10.43□□□□□ -0.74
CCDC171-208ENST00000486641 A0A1W2PQ72 361 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 MROH6A6NGR9 719 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 MYO1GB0I1T2 1018 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 hCG_2039718K7EN88 272 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 MEN1O00255 615 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 CDC7O00311 574 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 CYP7B1O75881 506 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 RETP07949 1114 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 SLC2A3P11169 496 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 IL7P13232 177 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 INSRRP14616 1297 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 CA5AP35218 305 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 SLC19A1P41440 591 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 PIK3CBP42338 1070 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 LIMK1P53667 647 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 CRISP3P54108 245 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 SEMA3AQ14563 771 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 PTPRCAPQ14761 206 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 TSNQ15631 228 aaKnown RBP10.42□□□□□ -0.74
CCDC171-208ENST00000486641 PROX2Q3B8N5 592 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 GCNT7Q6ZNI0 430 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 EFL1Q7Z2Z2 1120 aaKnown RBP10.42□□□□□ -0.74
CCDC171-208ENST00000486641 ZDHHC21Q8IVQ6 265 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 CYP4Z2PQ8N1L4 340 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 C10orf111Q8N326 155 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 SLC7A6Q92536 515 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 FCGR1BQ92637 280 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 TNIP3Q96KP6 325 aa10.42□□□□□ -0.74
CCDC171-208ENST00000486641 SLC30A2Q9BRI3 323 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms