RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 ACTR8Q9H981 624 aa19.89■□□□□ 0.77
HPS3-206ENST00000486530 COPS7BQ9H9Q2 264 aaPredicted RBP19.89■□□□□ 0.77
HPS3-206ENST00000486530 ZNF490Q9ULM2 529 aaPredicted RBP19.89■□□□□ 0.77
HPS3-206ENST00000486530 EIF3LQ9Y262 564 aaKnown RBP19.89■□□□□ 0.77
HPS3-206ENST00000486530 OTOL1A6NHN0 477 aaPredicted RBP19.88■□□□□ 0.77
HPS3-206ENST00000486530 RPL38P63173 70 aaKnown RBP19.88■□□□□ 0.77
HPS3-206ENST00000486530 IMPG1Q17R60 797 aa19.88■□□□□ 0.77
HPS3-206ENST00000486530 SYTL3Q4VX76 610 aa19.88■□□□□ 0.77
HPS3-206ENST00000486530 RFTN2Q52LD8 501 aaPredicted RBP19.88■□□□□ 0.77
HPS3-206ENST00000486530 GALNT13Q8IUC8 556 aa19.88■□□□□ 0.77
HPS3-206ENST00000486530 BEND7Q8N7W2 519 aaPredicted RBP19.88■□□□□ 0.77
HPS3-206ENST00000486530 PIP4K2CQ8TBX8 421 aa19.88■□□□□ 0.77
HPS3-206ENST00000486530 GLMNQ92990 594 aa19.88■□□□□ 0.77
HPS3-206ENST00000486530 PPP1R16AQ96I34 528 aa19.88■□□□□ 0.77
HPS3-206ENST00000486530 TRIM15Q9C019 465 aa19.88■□□□□ 0.77
HPS3-206ENST00000486530 CMTM6Q9NX76 183 aa19.88■□□□□ 0.77
HPS3-206ENST00000486530 DTNAQ9Y4J8 743 aa19.88■□□□□ 0.77
HPS3-206ENST00000486530 PCDHA9Q9Y5H5 950 aa19.88■□□□□ 0.77
HPS3-206ENST00000486530 C15orf38-AP3S2A0A0A6YYH1 394 aa19.88■□□□□ 0.77
HPS3-206ENST00000486530 SPINT1O43278 529 aa19.88■□□□□ 0.77
HPS3-206ENST00000486530 HLA-EP13747 358 aa19.88■□□□□ 0.77
HPS3-206ENST00000486530 SLC2A4P14672 509 aa19.88■□□□□ 0.77
HPS3-206ENST00000486530 AQP4P55087 323 aa19.88■□□□□ 0.77
HPS3-206ENST00000486530 PAGE3Q5JUK9 113 aa19.88■□□□□ 0.77
HPS3-206ENST00000486530 ZNF648Q5T619 568 aaPredicted RBP19.88■□□□□ 0.77
HPS3-206ENST00000486530 IRAK1BP1Q5VVH5 260 aa19.88■□□□□ 0.77
HPS3-206ENST00000486530 FBXL19Q6PCT2 694 aa19.88■□□□□ 0.77
HPS3-206ENST00000486530 ARPINQ7Z6K5 226 aa19.88■□□□□ 0.77
HPS3-206ENST00000486530 RASGEF1AQ8N9B8 481 aa19.88■□□□□ 0.77
HPS3-206ENST00000486530 ZUFSPQ96AP4 578 aa19.88■□□□□ 0.77
HPS3-206ENST00000486530 TMEM125Q96AQ2 219 aa19.88■□□□□ 0.77
HPS3-206ENST00000486530 ARRDC3Q96B67 414 aa19.88■□□□□ 0.77
HPS3-206ENST00000486530 MAGEB10Q96LZ2 347 aaPredicted RBP19.88■□□□□ 0.77
HPS3-206ENST00000486530 P2RY13Q9BPV8 354 aa19.88■□□□□ 0.77
HPS3-206ENST00000486530 WRAP53Q9BUR4 548 aaKnown RBP19.88■□□□□ 0.77
HPS3-206ENST00000486530 ASIC5Q9NY37 505 aa19.88■□□□□ 0.77
HPS3-206ENST00000486530 AP4S1Q9Y587 144 aa19.88■□□□□ 0.77
HPS3-206ENST00000486530 ANKRD28O15084 1053 aa19.87■□□□□ 0.77
HPS3-206ENST00000486530 TSPAN6O43657 245 aa19.87■□□□□ 0.77
HPS3-206ENST00000486530 FCARP24071 287 aa19.87■□□□□ 0.77
HPS3-206ENST00000486530 MAPK9P45984 424 aa19.87■□□□□ 0.77
HPS3-206ENST00000486530 GNPDA1P46926 289 aa19.87■□□□□ 0.77
HPS3-206ENST00000486530 ZNF234Q14588 700 aa19.87■□□□□ 0.77
HPS3-206ENST00000486530 PTCHD3Q3KNS1 767 aa19.87■□□□□ 0.77
HPS3-206ENST00000486530 ANKRD54Q6NXT1 300 aa19.87■□□□□ 0.77
HPS3-206ENST00000486530 PRR23BQ6ZRT6 265 aa19.87■□□□□ 0.77
HPS3-206ENST00000486530 ZNF765Q7L2R6 523 aa19.87■□□□□ 0.77
HPS3-206ENST00000486530 DPP10Q8N608 796 aa19.87■□□□□ 0.77
HPS3-206ENST00000486530 TERB1Q8NA31 727 aa19.87■□□□□ 0.77
HPS3-206ENST00000486530 ST13P5Q8NFI4 369 aaPredicted RBP19.87■□□□□ 0.77
HPS3-206ENST00000486530 ADCY4Q8NFM4 1077 aa19.87■□□□□ 0.77
HPS3-206ENST00000486530 TMEM159Q96B96 161 aa19.87■□□□□ 0.77
HPS3-206ENST00000486530 FBXL8Q96CD0 374 aa19.87■□□□□ 0.77
HPS3-206ENST00000486530 NR1H4Q96RI1 486 aaPredicted RBP19.87■□□□□ 0.77
HPS3-206ENST00000486530 CCM2Q9BSQ5 444 aa19.87■□□□□ 0.77
HPS3-206ENST00000486530 MUC13Q9H3R2 512 aa19.87■□□□□ 0.77
HPS3-206ENST00000486530 ACTL8Q9H568 366 aa19.87■□□□□ 0.77
HPS3-206ENST00000486530 HPS4Q9NQG7 708 aa19.87■□□□□ 0.77
HPS3-206ENST00000486530 FARSBQ9NSD9 589 aaKnown RBP19.87■□□□□ 0.77
HPS3-206ENST00000486530 DNAJA2O60884 412 aa19.86■□□□□ 0.77
HPS3-206ENST00000486530 SLC7A1P30825 629 aa19.86■□□□□ 0.77
HPS3-206ENST00000486530 CTSCP53634 463 aa19.86■□□□□ 0.77
HPS3-206ENST00000486530 TMEM115Q12893 351 aaPredicted RBP19.86■□□□□ 0.77
HPS3-206ENST00000486530 ZXDCQ2QGD7 858 aaPredicted RBP19.86■□□□□ 0.77
HPS3-206ENST00000486530 LILRA2Q8N149 483 aa19.86■□□□□ 0.77
HPS3-206ENST00000486530 ICA1LQ8NDH6 482 aa19.86■□□□□ 0.77
HPS3-206ENST00000486530 OR2T34Q8NGX1 318 aa19.86■□□□□ 0.77
HPS3-206ENST00000486530 OR2T3Q8NH03 318 aa19.86■□□□□ 0.77
HPS3-206ENST00000486530 BTBD9Q96Q07 612 aa19.86■□□□□ 0.77
HPS3-206ENST00000486530 ZBTB18Q99592 522 aa19.86■□□□□ 0.77
HPS3-206ENST00000486530 PKP2Q99959 881 aa19.86■□□□□ 0.77
HPS3-206ENST00000486530 TMEM245Q9H330 911 aa19.86■□□□□ 0.77
HPS3-206ENST00000486530 LRTM1Q9HBL6 345 aa19.86■□□□□ 0.77
HPS3-206ENST00000486530 DNAJC11Q9NVH1 559 aa19.86■□□□□ 0.77
HPS3-206ENST00000486530 SNX6Q9UNH7 406 aa19.86■□□□□ 0.77
HPS3-206ENST00000486530 ARNTLO00327 626 aa19.86■□□□□ 0.77
HPS3-206ENST00000486530 PSIP1O75475 530 aaKnown RBP19.86■□□□□ 0.77
HPS3-206ENST00000486530 VARSP26640 1264 aaKnown RBP19.86■□□□□ 0.77
HPS3-206ENST00000486530 MAP4P27816 1152 aaKnown RBP19.86■□□□□ 0.77
HPS3-206ENST00000486530 METAP1P53582 386 aa19.86■□□□□ 0.77
HPS3-206ENST00000486530 HMGCS1Q01581 520 aa19.86■□□□□ 0.77
HPS3-206ENST00000486530 CPSF6Q16630 551 aaKnown RBP eCLIP19.86■□□□□ 0.77
HPS3-206ENST00000486530 HABP4Q5JVS0 413 aaKnown RBP19.86■□□□□ 0.77
HPS3-206ENST00000486530 CACHD1Q5VU97 1274 aa19.86■□□□□ 0.77
HPS3-206ENST00000486530 TANGO2Q6ICL3 276 aa19.86■□□□□ 0.77
HPS3-206ENST00000486530 CYP2R1Q6VVX0 501 aa19.86■□□□□ 0.77
HPS3-206ENST00000486530 RGL4Q8IZJ4 473 aa19.86■□□□□ 0.77
HPS3-206ENST00000486530 L3MBTL4Q8NA19 623 aa19.86■□□□□ 0.77
HPS3-206ENST00000486530 UCMAQ8WVF2 138 aa19.86■□□□□ 0.77
HPS3-206ENST00000486530 EFHD1Q9BUP0 239 aa19.86■□□□□ 0.77
HPS3-206ENST00000486530 ZCCHC2Q9C0B9 1178 aaKnown RBP19.86■□□□□ 0.77
HPS3-206ENST00000486530 EPHX3Q9H6B9 360 aa19.86■□□□□ 0.77
HPS3-206ENST00000486530 KCNE1BA0A087WTH5 132 aa19.85■□□□□ 0.77
HPS3-206ENST00000486530 TMEM202A6NGA9 273 aa19.85■□□□□ 0.77
HPS3-206ENST00000486530 AQP12BA6NM10 295 aa19.85■□□□□ 0.77
HPS3-206ENST00000486530 AREL1O15033 823 aa19.85■□□□□ 0.77
HPS3-206ENST00000486530 RNASEH2AO75792 299 aaKnown RBP19.85■□□□□ 0.77
HPS3-206ENST00000486530 CAPNS1P04632 268 aa19.85■□□□□ 0.77
HPS3-206ENST00000486530 ADRB3P13945 408 aa19.85■□□□□ 0.77
HPS3-206ENST00000486530 UQCRBP14927 111 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms