RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 PARGQ86W56 976 aa11.04□□□□□ -0.64
SND1-212ENST00000485871 CRLF3Q8IUI8 442 aa11.04□□□□□ -0.64
SND1-212ENST00000485871 SPDYE1Q8NFV5 336 aaPredicted RBP11.04□□□□□ -0.64
SND1-212ENST00000485871 PPP1R14CQ8TAE6 165 aa11.04□□□□□ -0.64
SND1-212ENST00000485871 GPBAR1Q8TDU6 330 aa11.04□□□□□ -0.64
SND1-212ENST00000485871 L3HYPDHQ96EM0 354 aa11.04□□□□□ -0.64
SND1-212ENST00000485871 TMEM237Q96Q45 408 aa11.04□□□□□ -0.64
SND1-212ENST00000485871 GATA5Q9BWX5 397 aaPredicted RBP11.04□□□□□ -0.64
SND1-212ENST00000485871 C1QTNF3Q9BXJ4 246 aa11.04□□□□□ -0.64
SND1-212ENST00000485871 TMEM168Q9H0V1 697 aa11.04□□□□□ -0.64
SND1-212ENST00000485871 MIR1-1HGQ9H1L0 117 aa11.04□□□□□ -0.64
SND1-212ENST00000485871 SLCO1B3Q9NPD5 702 aa11.04□□□□□ -0.64
SND1-212ENST00000485871 ABCF3Q9NUQ8 709 aa11.04□□□□□ -0.64
SND1-212ENST00000485871 TMEM74BQ9NUR3 256 aa11.04□□□□□ -0.64
SND1-212ENST00000485871 THAP1Q9NVV9 213 aa11.04□□□□□ -0.64
SND1-212ENST00000485871 KCNK4Q9NYG8 393 aa11.04□□□□□ -0.64
SND1-212ENST00000485871 NUDT4Q9NZJ9 180 aa11.04□□□□□ -0.64
SND1-212ENST00000485871 NCDNQ9UBB6 729 aa11.04□□□□□ -0.64
SND1-212ENST00000485871 MOSPD1Q9UJG1 213 aa11.04□□□□□ -0.64
SND1-212ENST00000485871 PILRBQ9UKJ0 227 aa11.04□□□□□ -0.64
SND1-212ENST00000485871 PCOLCE2Q9UKZ9 415 aa11.04□□□□□ -0.64
SND1-212ENST00000485871 ACSL5Q9ULC5 683 aa11.04□□□□□ -0.64
SND1-212ENST00000485871 WDR37Q9Y2I8 494 aa11.04□□□□□ -0.64
SND1-212ENST00000485871 GPSM3Q9Y4H4 160 aa11.04□□□□□ -0.64
SND1-212ENST00000485871 KMT2BQ9UMN6 2715 aaPredicted RBP11.04□□□□□ -0.64
SND1-212ENST00000485871 PCM1Q15154 2024 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 SYCE1LA8MT33 242 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 ANKRD65E5RJM6 399 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 STX16-NPEPL1H3BU86 382 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 STX16O14662 325 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 BCAT2O15382 392 aaPredicted RBP11.03□□□□□ -0.64
SND1-212ENST00000485871 FFAR2O15552 330 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 TRIM13O60858 407 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 SNNO75324 88 aaPredicted RBP11.03□□□□□ -0.64
SND1-212ENST00000485871 IPO13O94829 963 aaKnown RBP11.03□□□□□ -0.64
SND1-212ENST00000485871 SNUPNO95149 360 aaKnown RBP11.03□□□□□ -0.64
SND1-212ENST00000485871 C1orf105O95561 183 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 EML2O95834 649 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 TNFP01375 233 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 CSF2P04141 144 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 TPBGLP0DKB5 382 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 BGNP21810 368 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 AK4P27144 223 aaPredicted RBP11.03□□□□□ -0.64
SND1-212ENST00000485871 MAPK9P45984 424 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 DHPSP49366 369 aaPredicted RBP11.03□□□□□ -0.64
SND1-212ENST00000485871 CSNK1EP49674 416 aaKnown RBP11.03□□□□□ -0.64
SND1-212ENST00000485871 HK2P52789 917 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 ARFIP2P53365 341 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 CTBSQ01459 385 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 ASPHQ12797 758 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 ABRQ12979 859 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 STX3Q13277 289 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 GRB7Q14451 532 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 CHI3L2Q15782 390 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 TBCCQ15814 346 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 CCSMST1Q4G0I0 132 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 CDKL4Q5MAI5 379 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 LIPMQ5VYY2 423 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 FAM91A1Q658Y4 838 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 ABRAXAS1Q6UWZ7 409 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 UNC5DQ6UXZ4 953 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 WASH2PQ6VEQ5 465 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 ZCCHC23Q6ZST2 131 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 RD3Q7Z3Z2 195 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 GPSM1Q86YR5 675 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 HID1Q8IV36 788 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 PHACTR4Q8IZ21 702 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 EXT2Q93063 718 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 RHBDF1Q96CC6 855 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 CCDC126Q96EE4 140 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 RAB3IPQ96QF0 476 aaPredicted RBP11.03□□□□□ -0.64
SND1-212ENST00000485871 TMEM79Q9BSE2 394 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 C20orf27Q9GZN8 174 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 WWP1Q9H0M0 922 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 PARVBQ9HBI1 364 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 WASH6PQ9NQA3 447 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 NCKIPSDQ9NZQ3 722 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 PTBP2Q9UKA9 531 aaKnown RBP11.03□□□□□ -0.64
SND1-212ENST00000485871 CDV3Q9UKY7 258 aaKnown RBP11.03□□□□□ -0.64
SND1-212ENST00000485871 TMCO1Q9UM00 188 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 ASB1Q9Y576 335 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 CACNA1EQ15878 2313 aa11.03□□□□□ -0.64
SND1-212ENST00000485871 SPTBN2O15020 2390 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 A0A1B0GTW7 788 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 KRT87PA6NCN2 255 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 LRRC14BA6NHZ5 514 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 SUPT3HB4E1H0 165 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 TAPBPO15533 448 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 ITM2AO43736 263 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 SUPT3HO75486 399 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 UNC5CO95185 931 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 SERPINE1P05121 402 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 CELA2BP08218 269 aaPredicted RBP11.02□□□□□ -0.65
SND1-212ENST00000485871 RPS17P08708 135 aaKnown RBP11.02□□□□□ -0.65
SND1-212ENST00000485871 VCLP18206 1134 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 IDSP22304 550 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 CTSKP43235 329 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 BDKRB1P46663 353 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 RPIAP49247 311 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 ALDH18A1P54886 795 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms