RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 RAB41Q5JT25 222 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 COLEC12Q5KU26 742 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 C1orf220Q5T0J3 134 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 GRTP1Q5TC63 336 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 SEL1L2Q5TEA6 688 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 MBNL2Q5VZF2 373 aaKnown RBP3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 CST9LP1Q5W188 147 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 DENND2CQ68D51 928 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 GJB7Q6PEY0 223 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 TRIM72Q6ZMU5 477 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 Q6ZPA2 131 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 TPGS1Q6ZTW0 290 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 ERN2Q76MJ5 926 aaKnown RBP3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 RNF44Q7L0R7 432 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 EFL1Q7Z2Z2 1120 aaKnown RBP3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 ANKS1BQ7Z6G8 1248 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 ZNF677Q86XU0 584 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 SLC13A5Q86YT5 568 aaPredicted RBP3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 CDKL3Q8IVW4 592 aaPredicted RBP3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 SFRP1Q8N474 314 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 ANKFN1Q8N957 763 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 CCDC197Q8NCU1 140 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 PIK3C3Q8NEB9 887 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 RDM1Q8NG50 284 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 B4GALNT2Q8NHY0 566 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 FBXO25Q8TCJ0 367 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 CHURC1Q8WUH1 139 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 UBLCP1Q8WVY7 318 aaPredicted RBP3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 PSPC1Q8WXF1 523 aaKnown RBP3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 POMGNT1Q8WZA1 660 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 ART4Q93070 314 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 SLC35B4Q969S0 331 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 SLAMF9Q96A28 289 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 MAGOHBQ96A72 148 aaKnown RBP3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 MIEF2Q96C03 454 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 ARHGEF26Q96DR7 871 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 MASTLQ96GX5 879 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 DYDC2Q96IM9 177 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 RPRD1AQ96P16 312 aaPredicted RBP3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 SERPINB12Q96P63 405 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 ACCSQ96QU6 501 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 SECISBP2Q96T21 854 aaKnown RBP3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 CYTH2Q99418 400 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 NEU1Q99519 415 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 SSX3Q99909 188 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 PIMREGQ9BSJ6 248 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 RTKNQ9BST9 563 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 TUBB6Q9BUF5 446 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 NTMT1Q9BV86 223 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 TEKT3Q9BXF9 490 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 TWSG1Q9GZX9 223 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 GOLPH3Q9H4A6 298 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 PCIF1Q9H4Z3 704 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 SLC40A1Q9NP59 571 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 TREM1Q9NP99 234 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 PPANQ9NQ55 473 aaKnown RBP3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 KLC4Q9NSK0 619 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 SACM1LQ9NTJ5 587 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 TBC1D23Q9NUY8 699 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 FBXO28Q9NVF7 368 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 TRNAU1APQ9NX07 287 aaKnown RBP3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 RGL1Q9NZL6 768 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 LARSQ9P2J5 1176 aaKnown RBP3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 COPG2Q9UBF2 871 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 TRPC4Q9UBN4 977 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 NOCTQ9UK39 431 aaKnown RBP3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 PAIP2BQ9ULR5 123 aaKnown RBP3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 HSF4Q9ULV5 492 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 SLC12A4Q9UP95 1085 aa3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 TDRKHQ9Y2W6 561 aaKnown RBP3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 MRPS2Q9Y399 296 aaKnown RBP3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 STRAPQ9Y3F4 350 aaKnown RBP3.97□□□□□ -1.77
PRPF38B-205ENST00000485810 AFF2P51816 1311 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 A0A1W2PRG0 241 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 TRBC2A0A5B9 178 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 GSAPA4D1B5 854 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 SLC15A5A6NIM6 579 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 RGS16O15492 202 aaPredicted RBP3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 HTRA2O43464 458 aaPredicted RBP3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 RECQL5O94762 991 aaPredicted RBP3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 SEC24DO94855 1032 aaPredicted RBP3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 SPDEFO95238 335 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 PTBP3O95758 552 aaKnown RBP3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 NDST3O95803 873 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 PDGFBP01127 241 aaPredicted RBP3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 TGFAP01135 160 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 APOA1P02647 267 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 ABHD2P08910 425 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 ZCCHC18P0CG32 403 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 ODC1P11926 461 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 ALADP13716 330 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 PKMP14618 531 aaKnown RBP3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 CHN1P15882 459 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 CHRNB2P17787 502 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 POLR2EP19388 210 aaKnown RBP3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 HNRNPA2B1P22626 353 aaKnown RBP3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 TCEA1P23193 301 aaKnown RBP3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 IL32P24001 234 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 CD40P25942 277 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 IVDP26440 423 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms