RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 C1orf189Q5VU69 101 aa18.59■□□□□ 0.57
COL27A1-205ENST00000485397 MLIPQ5VWP3 458 aa18.59■□□□□ 0.57
COL27A1-205ENST00000485397 MED25Q71SY5 747 aa18.59■□□□□ 0.57
COL27A1-205ENST00000485397 HOOK3Q86VS8 718 aa18.59■□□□□ 0.57
COL27A1-205ENST00000485397 GPR135Q8IZ08 494 aa18.59■□□□□ 0.57
COL27A1-205ENST00000485397 Q8NA96 180 aa18.59■□□□□ 0.57
COL27A1-205ENST00000485397 TTC13Q8NBP0 860 aa18.59■□□□□ 0.57
COL27A1-205ENST00000485397 FLVCR1-AS1Q8TAF5 88 aa18.59■□□□□ 0.57
COL27A1-205ENST00000485397 N4BP2L2Q92802 583 aaPredicted RBP18.59■□□□□ 0.57
COL27A1-205ENST00000485397 DPH2Q9BQC3 489 aaPredicted RBP18.59■□□□□ 0.57
COL27A1-205ENST00000485397 AMFRQ9UKV5 643 aa18.59■□□□□ 0.57
COL27A1-205ENST00000485397 PLAGL1Q9UM63 463 aa18.59■□□□□ 0.57
COL27A1-205ENST00000485397 PACSIN2Q9UNF0 486 aaPredicted RBP18.59■□□□□ 0.57
COL27A1-205ENST00000485397 TDRKHQ9Y2W6 561 aaKnown RBP18.59■□□□□ 0.57
COL27A1-205ENST00000485397 SHANK1Q9Y566 2161 aa18.58■□□□□ 0.57
COL27A1-205ENST00000485397 RP1L1Q8IWN7 2480 aaPredicted RBP18.58■□□□□ 0.57
COL27A1-205ENST00000485397 PIKFYVEQ9Y2I7 2098 aa18.58■□□□□ 0.57
COL27A1-205ENST00000485397 MROH6A6NGR9 719 aa18.58■□□□□ 0.56
COL27A1-205ENST00000485397 H3BMH7 237 aa18.58■□□□□ 0.56
COL27A1-205ENST00000485397 ZNF189O75820 626 aaPredicted RBP18.58■□□□□ 0.56
COL27A1-205ENST00000485397 KLF7O75840 302 aaPredicted RBP18.58■□□□□ 0.56
COL27A1-205ENST00000485397 OR2B3O76000 313 aa18.58■□□□□ 0.56
COL27A1-205ENST00000485397 IPO7O95373 1038 aaKnown RBP18.58■□□□□ 0.56
COL27A1-205ENST00000485397 AP2A1O95782 977 aa18.58■□□□□ 0.56
COL27A1-205ENST00000485397 PTMAP06454 111 aaKnown RBP18.58■□□□□ 0.56
COL27A1-205ENST00000485397 CHRM5P08912 532 aaPredicted RBP18.58■□□□□ 0.56
COL27A1-205ENST00000485397 MSNP26038 577 aaKnown RBP18.58■□□□□ 0.56
COL27A1-205ENST00000485397 FOXN2P32314 431 aa18.58■□□□□ 0.56
COL27A1-205ENST00000485397 SHMT2P34897 504 aa18.58■□□□□ 0.56
COL27A1-205ENST00000485397 GABRA4P48169 554 aa18.58■□□□□ 0.56
COL27A1-205ENST00000485397 RRADP55042 308 aa18.58■□□□□ 0.56
COL27A1-205ENST00000485397 ITIH4Q14624 930 aa18.58■□□□□ 0.56
COL27A1-205ENST00000485397 CCDC38Q502W7 563 aa18.58■□□□□ 0.56
COL27A1-205ENST00000485397 RAB43Q86YS6 212 aa18.58■□□□□ 0.56
COL27A1-205ENST00000485397 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.58■□□□□ 0.567e-6■■■■■ 27.5
COL27A1-205ENST00000485397 TCTN2Q96GX1 697 aa18.58■□□□□ 0.56
COL27A1-205ENST00000485397 ALS2CR12Q96Q35 445 aa18.58■□□□□ 0.56
COL27A1-205ENST00000485397 TMEM121Q9BTD3 319 aa18.58■□□□□ 0.56
COL27A1-205ENST00000485397 SLAMF7Q9NQ25 335 aa18.58■□□□□ 0.56
COL27A1-205ENST00000485397 GPR83Q9NYM4 423 aa18.58■□□□□ 0.56
COL27A1-205ENST00000485397 G3BP2Q9UN86 482 aaKnown RBP18.58■□□□□ 0.56
COL27A1-205ENST00000485397 ICE1Q9Y2F5 2266 aa18.57■□□□□ 0.56
COL27A1-205ENST00000485397 TCRBV7S2A1N4TA0A589 114 aa18.57■□□□□ 0.56
COL27A1-205ENST00000485397 SLC5A10A0PJK1 596 aa18.57■□□□□ 0.56
COL27A1-205ENST00000485397 CCDC162PA2VCL2 907 aa18.57■□□□□ 0.56
COL27A1-205ENST00000485397 BHMG1C9JSJ3 638 aaPredicted RBP18.57■□□□□ 0.56
COL27A1-205ENST00000485397 SEMA7AO75326 666 aa18.57■□□□□ 0.56
COL27A1-205ENST00000485397 FTH1P02794 183 aa18.57■□□□□ 0.56
COL27A1-205ENST00000485397 PSMA3P25788 255 aa18.57■□□□□ 0.56
COL27A1-205ENST00000485397 ZNF75DP51815 510 aa18.57■□□□□ 0.56
COL27A1-205ENST00000485397 FOXL2P58012 376 aa18.57■□□□□ 0.56
COL27A1-205ENST00000485397 KLF1Q13351 362 aaPredicted RBP18.57■□□□□ 0.56
COL27A1-205ENST00000485397 P3H1Q32P28 736 aa18.57■□□□□ 0.56
COL27A1-205ENST00000485397 SLC6A19Q695T7 634 aa18.57■□□□□ 0.56
COL27A1-205ENST00000485397 PEX26Q7Z412 305 aa18.57■□□□□ 0.56
COL27A1-205ENST00000485397 TBC1D21Q8IYX1 336 aa18.57■□□□□ 0.56
COL27A1-205ENST00000485397 OR52K1Q8NGK4 314 aa18.57■□□□□ 0.56
COL27A1-205ENST00000485397 SLC35B2Q8TB61 432 aa18.57■□□□□ 0.56
COL27A1-205ENST00000485397 SGSM3Q96HU1 749 aa18.57■□□□□ 0.56
COL27A1-205ENST00000485397 SMAD5Q99717 465 aaKnown RBP18.57■□□□□ 0.56
COL27A1-205ENST00000485397 DHRS4Q9BTZ2 278 aa18.57■□□□□ 0.56
COL27A1-205ENST00000485397 IMPACTQ9P2X3 320 aa18.57■□□□□ 0.56
COL27A1-205ENST00000485397 PADI2Q9Y2J8 665 aa18.57■□□□□ 0.56
COL27A1-205ENST00000485397 SPTAN1Q13813 2472 aaKnown RBP18.56■□□□□ 0.56
COL27A1-205ENST00000485397 A0A0J9YY10 115 aa18.56■□□□□ 0.56
COL27A1-205ENST00000485397 PSMD3O43242 534 aa18.56■□□□□ 0.56
COL27A1-205ENST00000485397 OR1I1O60431 355 aa18.56■□□□□ 0.56
COL27A1-205ENST00000485397 RNF224P0DH78 156 aa18.56■□□□□ 0.56
COL27A1-205ENST00000485397 PEBP1P30086 187 aaKnown RBP18.56■□□□□ 0.56
COL27A1-205ENST00000485397 SLC9A5Q14940 896 aa18.56■□□□□ 0.56
COL27A1-205ENST00000485397 KYNUQ16719 465 aa18.56■□□□□ 0.56
COL27A1-205ENST00000485397 C4orf17Q53FE4 359 aa18.56■□□□□ 0.56
COL27A1-205ENST00000485397 RHBDD2Q6NTF9 364 aa18.56■□□□□ 0.56
COL27A1-205ENST00000485397 PACS1Q6VY07 963 aa18.56■□□□□ 0.56
COL27A1-205ENST00000485397 MRGPREQ86SM8 312 aa18.56■□□□□ 0.56
COL27A1-205ENST00000485397 TMEM151BQ8IW70 566 aa18.56■□□□□ 0.56
COL27A1-205ENST00000485397 FAM20CQ8IXL6 584 aa18.56■□□□□ 0.56
COL27A1-205ENST00000485397 ZNF655Q8N720 491 aaPredicted RBP18.56■□□□□ 0.56
COL27A1-205ENST00000485397 OR5K2Q8NHB8 316 aa18.56■□□□□ 0.56
COL27A1-205ENST00000485397 GBP5Q96PP8 586 aa18.56■□□□□ 0.56
COL27A1-205ENST00000485397 DHCR7Q9UBM7 475 aaKnown RBP18.56■□□□□ 0.56
COL27A1-205ENST00000485397 POLG2Q9UHN1 485 aa18.56■□□□□ 0.56
COL27A1-205ENST00000485397 PTRH2Q9Y3E5 179 aaKnown RBP18.56■□□□□ 0.56
COL27A1-205ENST00000485397 AP1M2Q9Y6Q5 423 aa18.56■□□□□ 0.56
COL27A1-205ENST00000485397 ESPL1Q14674 2120 aa18.56■□□□□ 0.56
COL27A1-205ENST00000485397 FER1L5A0AVI2 2057 aa18.56■□□□□ 0.56
COL27A1-205ENST00000485397 A0A0U1RQJ8 604 aa18.55■□□□□ 0.56
COL27A1-205ENST00000485397 ISM1B1AKI9 464 aa18.55■□□□□ 0.56
COL27A1-205ENST00000485397 TCP11X1B4DZS4 312 aa18.55■□□□□ 0.56
COL27A1-205ENST00000485397 MASP2O00187 686 aa18.55■□□□□ 0.56
COL27A1-205ENST00000485397 QSOX1O00391 747 aa18.55■□□□□ 0.56
COL27A1-205ENST00000485397 CNOT3O75175 753 aaKnown RBP18.55■□□□□ 0.56
COL27A1-205ENST00000485397 FTCDO95954 541 aa18.55■□□□□ 0.56
COL27A1-205ENST00000485397 OR56A5P0C7T3 313 aa18.55■□□□□ 0.56
COL27A1-205ENST00000485397 CSE1LP55060 971 aaKnown RBP18.55■□□□□ 0.56
COL27A1-205ENST00000485397 MRPL49Q13405 166 aaKnown RBP18.55■□□□□ 0.56
COL27A1-205ENST00000485397 SSPNQ14714 243 aa18.55■□□□□ 0.56
COL27A1-205ENST00000485397 EIF2S3LQ2VIR3 472 aaKnown RBP18.55■□□□□ 0.56
COL27A1-205ENST00000485397 SYTL3Q4VX76 610 aa18.55■□□□□ 0.56
COL27A1-205ENST00000485397 KIAA1328Q86T90 577 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms