RNA–Protein interactions for RNA: ENST00000485149.1

SORT1-206, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 442 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-206ENST00000485149 LMLNQ96KR4 655 aa6.21□□□□□ -1.42
SORT1-206ENST00000485149 RPL10LQ96L21 214 aaKnown RBP6.21□□□□□ -1.42
SORT1-206ENST00000485149 PRICKLE1Q96MT3 831 aaPredicted RBP6.21□□□□□ -1.42
SORT1-206ENST00000485149 RPRD1AQ96P16 312 aaPredicted RBP6.21□□□□□ -1.42
SORT1-206ENST00000485149 MCEEQ96PE7 176 aa6.21□□□□□ -1.42
SORT1-206ENST00000485149 RBM14Q96PK6 669 aaKnown RBP6.21□□□□□ -1.42
SORT1-206ENST00000485149 DDX50Q9BQ39 737 aaKnown RBP6.21□□□□□ -1.42
SORT1-206ENST00000485149 ZPBPQ9BS86 351 aa6.21□□□□□ -1.42
SORT1-206ENST00000485149 TRIM62Q9BVG3 475 aa6.21□□□□□ -1.42
SORT1-206ENST00000485149 SLC12A9Q9BXP2 914 aa6.21□□□□□ -1.42
SORT1-206ENST00000485149 STRADBQ9C0K7 418 aa6.21□□□□□ -1.42
SORT1-206ENST00000485149 YY1AP1Q9H869 796 aa6.21□□□□□ -1.42
SORT1-206ENST00000485149 EPB41L5Q9HCM4 733 aa6.21□□□□□ -1.42
SORT1-206ENST00000485149 ZNF71Q9NQZ8 489 aaPredicted RBP6.21□□□□□ -1.42
SORT1-206ENST00000485149 DDX18Q9NVP1 670 aaKnown RBP6.21□□□□□ -1.42
SORT1-206ENST00000485149 ARHGEF38Q9NXL2 777 aa6.21□□□□□ -1.42
SORT1-206ENST00000485149 CNOT8Q9UFF9 292 aaKnown RBP6.21□□□□□ -1.42
SORT1-206ENST00000485149 STAP1Q9ULZ2 295 aa6.21□□□□□ -1.42
SORT1-206ENST00000485149 VPS4AQ9UN37 437 aa6.21□□□□□ -1.42
SORT1-206ENST00000485149 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.21□□□□□ -1.42
SORT1-206ENST00000485149 CSNK1G3Q9Y6M4 447 aa6.21□□□□□ -1.42
SORT1-206ENST00000485149 NF1P21359 2839 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 EDDM13A0A1B0GTR0 161 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 TMEM191CA6NGB0 347 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 TTC34A8MYJ7 566 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 H3BUI4 141 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 NTN3O00634 580 aaPredicted RBP6.2□□□□□ -1.42
SORT1-206ENST00000485149 PLRG1O43660 514 aaKnown RBP6.2□□□□□ -1.42
SORT1-206ENST00000485149 CEP104O60308 925 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 SMNDC1O75940 238 aaKnown RBP eCLIP6.2□□□□□ -1.42
SORT1-206ENST00000485149 NEBLO76041 1014 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 LUC7L3O95232 432 aaKnown RBP6.2□□□□□ -1.42
SORT1-206ENST00000485149 LATS1O95835 1130 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 DDAH2O95865 285 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 F9P00740 461 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 IL1BP01584 269 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 CLEC3BP05452 202 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 KRT7P08729 469 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 TMEM253P0C7T8 217 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 CD82P27701 267 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 DRD3P35462 400 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 GP5P40197 560 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 CSKP41240 450 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 UQCRFS1P47985 274 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 STK19P49842 368 aaPredicted RBP6.2□□□□□ -1.42
SORT1-206ENST00000485149 HDAC4P56524 1084 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 NKX6-1P78426 367 aaPredicted RBP6.2□□□□□ -1.42
SORT1-206ENST00000485149 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.2□□□□□ -1.42
SORT1-206ENST00000485149 KLRB1Q12918 225 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 SP140Q13342 867 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 BAK1Q16611 211 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 IFI16Q16666 785 aaKnown RBP6.2□□□□□ -1.42
SORT1-206ENST00000485149 SMU1Q2TAY7 513 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 POM121L1PQ3SYA9 428 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 PITRM1Q5JRX3 1037 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 SPECC1LQ69YQ0 1117 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 CAPRIN2Q6IMN6 1127 aaKnown RBP6.2□□□□□ -1.42
SORT1-206ENST00000485149 PLEKHA7Q6IQ23 1121 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 WDR93Q6P2C0 686 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 ARHGAP11AQ6P4F7 1023 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.2□□□□□ -1.42
SORT1-206ENST00000485149 LEKR1Q6ZMV7 388 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 IKBIPQ70UQ0 350 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 BNIPLQ7Z465 357 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 TFAP2DQ7Z6R9 452 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 DTX1Q86Y01 620 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 CPNE8Q86YQ8 564 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 DPP10Q8N608 796 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 GLIS1Q8NBF1 620 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 NETO2Q8NC67 525 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 C3orf20Q8ND61 904 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 ZNF548Q8NEK5 533 aaPredicted RBP6.2□□□□□ -1.42
SORT1-206ENST00000485149 FAM216AQ8WUB2 273 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 SYN2Q92777 582 aaPredicted RBP6.2□□□□□ -1.42
SORT1-206ENST00000485149 FAM131CQ96AQ9 280 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 MTFMTQ96DP5 389 aaKnown RBP6.2□□□□□ -1.42
SORT1-206ENST00000485149 ARHGEF26Q96DR7 871 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 KTI12Q96EK9 354 aaPredicted RBP6.2□□□□□ -1.42
SORT1-206ENST00000485149 PGAP3Q96FM1 320 aaPredicted RBP6.2□□□□□ -1.42
SORT1-206ENST00000485149 VPS50Q96JG6 964 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 CATSPER2Q96P56 530 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 PRPF18Q99633 342 aaKnown RBP6.2□□□□□ -1.42
SORT1-206ENST00000485149 SLC39A3Q9BRY0 314 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 FEM1AQ9BSK4 669 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 CALN1Q9BXU9 219 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 PACSIN1Q9BY11 444 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 ISCUQ9H1K1 167 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 SERHLQ9NQF3 203 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 SNX15Q9NRS6 342 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 SACM1LQ9NTJ5 587 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 GPATCH2LQ9NWQ4 482 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 PISDQ9UG56 409 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 OR12D3Q9UGF7 316 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 ERVW-1Q9UQF0 538 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 CA5BQ9Y2D0 317 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 CAB39Q9Y376 341 aaPredicted RBP6.2□□□□□ -1.42
SORT1-206ENST00000485149 TMED5Q9Y3A6 229 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 CCL27Q9Y4X3 112 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 ACTL7AQ9Y615 435 aa6.2□□□□□ -1.42
SORT1-206ENST00000485149 SETD2Q9BYW2 2564 aaPredicted RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms