RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 CLEC7AQ9BXN2 247 aa2.76□□□□□ -1.97
VPS50-216ENST00000484954 RTN4RQ9BZR6 473 aa2.76□□□□□ -1.97
VPS50-216ENST00000484954 EIF2B3Q9NR50 452 aaKnown RBP2.76□□□□□ -1.97
VPS50-216ENST00000484954 WSB2Q9NYS7 404 aaPredicted RBP2.76□□□□□ -1.97
VPS50-216ENST00000484954 EPHA6Q9UF33 1036 aa2.76□□□□□ -1.97
VPS50-216ENST00000484954 ZDHHC2Q9UIJ5 367 aa2.76□□□□□ -1.97
VPS50-216ENST00000484954 F5H0A9 414 aaPredicted RBP2.75□□□□□ -1.97
VPS50-216ENST00000484954 WDPCPO95876 746 aa2.75□□□□□ -1.97
VPS50-216ENST00000484954 OPRL1P41146 370 aa2.75□□□□□ -1.97
VPS50-216ENST00000484954 PRKCZQ05513 592 aa2.75□□□□□ -1.97
VPS50-216ENST00000484954 SQLEQ14534 574 aa2.75□□□□□ -1.97
VPS50-216ENST00000484954 ITPRIPL2Q3MIP1 535 aa2.75□□□□□ -1.97
VPS50-216ENST00000484954 KRTAP13-3Q3SY46 172 aa2.75□□□□□ -1.97
VPS50-216ENST00000484954 HSP90AB4PQ58FF6 505 aa2.75□□□□□ -1.97
VPS50-216ENST00000484954 FAAH2Q6GMR7 532 aa2.75□□□□□ -1.97
VPS50-216ENST00000484954 METTL7BQ6UX53 244 aa2.75□□□□□ -1.97
VPS50-216ENST00000484954 BTN2A1Q7KYR7 527 aa2.75□□□□□ -1.97
VPS50-216ENST00000484954 HAUS6Q7Z4H7 955 aa2.75□□□□□ -1.97
VPS50-216ENST00000484954 FBXO39Q8N4B4 442 aa2.75□□□□□ -1.97
VPS50-216ENST00000484954 RAB42Q8N4Z0 105 aa2.75□□□□□ -1.97
VPS50-216ENST00000484954 OR5AP2Q8NGF4 316 aa2.75□□□□□ -1.97
VPS50-216ENST00000484954 IRGQQ8WZA9 623 aa2.75□□□□□ -1.97
VPS50-216ENST00000484954 DYRK2Q92630 601 aa2.75□□□□□ -1.97
VPS50-216ENST00000484954 HDAC2Q92769 488 aaKnown RBP2.75□□□□□ -1.97
VPS50-216ENST00000484954 OMA1Q96E52 524 aa2.75□□□□□ -1.97
VPS50-216ENST00000484954 MPP4Q96JB8 637 aa2.75□□□□□ -1.97
VPS50-216ENST00000484954 AGAP3Q96P47 875 aa2.75□□□□□ -1.97
VPS50-216ENST00000484954 PAFAH2Q99487 392 aa2.75□□□□□ -1.97
VPS50-216ENST00000484954 TRIM51Q9BSJ1 452 aa2.75□□□□□ -1.97
VPS50-216ENST00000484954 FUCA2Q9BTY2 467 aa2.75□□□□□ -1.97
VPS50-216ENST00000484954 SHARPINQ9H0F6 387 aa2.75□□□□□ -1.97
VPS50-216ENST00000484954 KCNK15Q9H427 330 aa2.75□□□□□ -1.97
VPS50-216ENST00000484954 TBC1D17Q9HA65 648 aa2.75□□□□□ -1.97
VPS50-216ENST00000484954 ERAP1Q9NZ08 941 aa2.75□□□□□ -1.97
VPS50-216ENST00000484954 SEC63Q9UGP8 760 aaKnown RBP2.75□□□□□ -1.97
VPS50-216ENST00000484954 DAPK2Q9UIK4 370 aa2.75□□□□□ -1.97
VPS50-216ENST00000484954 COL5A2P05997 1499 aaPredicted RBP2.75□□□□□ -1.97
VPS50-216ENST00000484954 OR2A25A4D2G3 310 aa2.74□□□□□ -1.97
VPS50-216ENST00000484954 LRRC72A6NJI9 287 aa2.74□□□□□ -1.97
VPS50-216ENST00000484954 AGAP14A8MT82 685 aa2.74□□□□□ -1.97
VPS50-216ENST00000484954 KLF11O14901 512 aa2.74□□□□□ -1.97
VPS50-216ENST00000484954 VILLO15195 856 aa2.74□□□□□ -1.97
VPS50-216ENST00000484954 DOK2O60496 412 aa2.74□□□□□ -1.97
VPS50-216ENST00000484954 ACSL1P33121 698 aa2.74□□□□□ -1.97
VPS50-216ENST00000484954 SLC15A1P46059 708 aa2.74□□□□□ -1.97
VPS50-216ENST00000484954 CSRP3P50461 194 aa2.74□□□□□ -1.97
VPS50-216ENST00000484954 NECTIN1Q15223 517 aa2.74□□□□□ -1.97
VPS50-216ENST00000484954 E2F5Q15329 346 aa2.74□□□□□ -1.97
VPS50-216ENST00000484954 FASTKD1Q53R41 847 aaKnown RBP2.74□□□□□ -1.97
VPS50-216ENST00000484954 RAB41Q5JT25 222 aa2.74□□□□□ -1.97
VPS50-216ENST00000484954 TCTE1Q5JU00 501 aa2.74□□□□□ -1.97
VPS50-216ENST00000484954 TMPRSS11FQ6ZWK6 438 aa2.74□□□□□ -1.97
VPS50-216ENST00000484954 MAATS1Q7Z4T9 603 aa2.74□□□□□ -1.97
VPS50-216ENST00000484954 ADIPOR2Q86V24 386 aa2.74□□□□□ -1.97
VPS50-216ENST00000484954 COMMD2Q86X83 199 aa2.74□□□□□ -1.97
VPS50-216ENST00000484954 CEP57Q86XR8 500 aa2.74□□□□□ -1.97
VPS50-216ENST00000484954 CFAP206Q8IYR0 622 aa2.74□□□□□ -1.97
VPS50-216ENST00000484954 KIRREL3Q8IZU9 778 aa2.74□□□□□ -1.97
VPS50-216ENST00000484954 OR11H4Q8NGC9 324 aa2.74□□□□□ -1.97
VPS50-216ENST00000484954 SAT2Q96F10 170 aaPredicted RBP2.74□□□□□ -1.97
VPS50-216ENST00000484954 BTBD10Q9BSF8 475 aa2.74□□□□□ -1.97
VPS50-216ENST00000484954 NUP85Q9BW27 656 aa2.74□□□□□ -1.97
VPS50-216ENST00000484954 SPATC1LQ9H0A9 340 aa2.74□□□□□ -1.97
VPS50-216ENST00000484954 PANK4Q9NVE7 773 aa2.74□□□□□ -1.97
VPS50-216ENST00000484954 B3GAT1Q9P2W7 334 aa2.74□□□□□ -1.97
VPS50-216ENST00000484954 CACNG4Q9UBN1 327 aa2.74□□□□□ -1.97
VPS50-216ENST00000484954 KLK13Q9UKR3 277 aa2.74□□□□□ -1.97
VPS50-216ENST00000484954 ZNF148Q9UQR1 794 aa2.74□□□□□ -1.97
VPS50-216ENST00000484954 WDR37Q9Y2I8 494 aa2.74□□□□□ -1.97
VPS50-216ENST00000484954 PPP2R2CQ9Y2T4 447 aa2.74□□□□□ -1.97
VPS50-216ENST00000484954 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.73□□□□□ -1.97
VPS50-216ENST00000484954 AP3D1O14617 1153 aa2.73□□□□□ -1.97
VPS50-216ENST00000484954 GJB3O75712 270 aa2.73□□□□□ -1.97
VPS50-216ENST00000484954 DDHD2O94830 711 aa2.73□□□□□ -1.97
VPS50-216ENST00000484954 IGHV4-31P0DP07 118 aa2.73□□□□□ -1.97
VPS50-216ENST00000484954 CA6P23280 308 aa2.73□□□□□ -1.97
VPS50-216ENST00000484954 PTPN3P26045 913 aa2.73□□□□□ -1.97
VPS50-216ENST00000484954 SHC1P29353 583 aa2.73□□□□□ -1.97
VPS50-216ENST00000484954 LEPRP48357 1165 aaKnown RBP2.73□□□□□ -1.97
VPS50-216ENST00000484954 PDX1P52945 283 aa2.73□□□□□ -1.97
VPS50-216ENST00000484954 PNLIPRP2P54317 469 aa2.73□□□□□ -1.97
VPS50-216ENST00000484954 PSMC6P62333 389 aa2.73□□□□□ -1.97
VPS50-216ENST00000484954 CDK3Q00526 305 aa2.73□□□□□ -1.97
VPS50-216ENST00000484954 GCNT1Q02742 428 aa2.73□□□□□ -1.97
VPS50-216ENST00000484954 DDX10Q13206 875 aaKnown RBP2.73□□□□□ -1.97
VPS50-216ENST00000484954 TAF13Q15543 124 aa2.73□□□□□ -1.97
VPS50-216ENST00000484954 UGP2Q16851 508 aa2.73□□□□□ -1.97
VPS50-216ENST00000484954 SGSM1Q2NKQ1 1148 aa2.73□□□□□ -1.97
VPS50-216ENST00000484954 ZNF343Q6P1L6 599 aa2.73□□□□□ -1.97
VPS50-216ENST00000484954 PAQR6Q6TCH4 344 aa2.73□□□□□ -1.97
VPS50-216ENST00000484954 TMCO3Q6UWJ1 677 aa2.73□□□□□ -1.97
VPS50-216ENST00000484954 RTN4RL2Q86UN3 420 aa2.73□□□□□ -1.97
VPS50-216ENST00000484954 HOGA1Q86XE5 327 aa2.73□□□□□ -1.97
VPS50-216ENST00000484954 EID3Q8N140 333 aa2.73□□□□□ -1.97
VPS50-216ENST00000484954 AMER3Q8N944 861 aa2.73□□□□□ -1.97
VPS50-216ENST00000484954 NPEPL1Q8NDH3 523 aa2.73□□□□□ -1.97
VPS50-216ENST00000484954 MOSPD2Q8NHP6 518 aa2.73□□□□□ -1.97
VPS50-216ENST00000484954 EVI5LQ96CN4 794 aa2.73□□□□□ -1.97
VPS50-216ENST00000484954 CDRT15Q96T59 188 aa2.73□□□□□ -1.97
VPS50-216ENST00000484954 CHCHD6Q9BRQ6 235 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms