RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 AGTPBP1Q9UPW5 1226 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 CHKBQ9Y259 395 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 C13orf42A0A1B0GVH6 325 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 SPRY3O43610 288 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 VEGFDO43915 354 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 PRPSAP2O60256 369 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 RFPL2O75678 378 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 AKAP3O75969 853 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 GAGE7O76087 117 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 LUC7L3O95232 432 aaKnown RBP4.32□□□□□ -1.72
VPS13A-211ENST00000484581 IGHV2-70P01814 119 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 SLC4A1P02730 911 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 GAGE12FP0CL80 117 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 GAGE12GP0CL81 117 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 GAGE12IP0CL82 117 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 C8orf89P0DMQ9 161 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 EPCAMP16422 314 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 VCLP18206 1134 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 CCND3P30281 292 aaPredicted RBP4.32□□□□□ -1.72
VPS13A-211ENST00000484581 CTNNB1P35222 781 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 AMTP48728 403 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 MFAP3P55082 362 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 NME5P56597 212 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 GAGE1Q13065 139 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 GAGE4Q13068 117 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 PTGR1Q14914 329 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 SLC39A14Q15043 492 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 IQCCQ4KMZ1 466 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 AARDQ4LEZ3 155 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 MANEAQ5SRI9 462 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 PXDC1Q5TGL8 231 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 ZNF517Q6ZMY9 492 aaPredicted RBP4.32□□□□□ -1.72
VPS13A-211ENST00000484581 DGLUCYQ7Z3D6 616 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 EXOC3L1Q86VI1 746 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 OR52I2Q8NH67 350 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 OR14A16Q8NHC5 309 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 PRSS3P2Q8NHM4 247 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 SLC25A28Q96A46 364 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 EEF2KMTQ96G04 330 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 FAM84BQ96KN1 310 aaPredicted RBP4.32□□□□□ -1.72
VPS13A-211ENST00000484581 RUNDC3BQ96NL0 473 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 PKP4Q99569 1192 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 ABCG8Q9H221 673 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 RNPEPL1Q9HAU8 725 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 Q9N2K0 584 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 NOX4Q9NPH5 578 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 PRMT8Q9NR22 394 aaPredicted RBP4.32□□□□□ -1.72
VPS13A-211ENST00000484581 PNPLA3Q9NST1 481 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 TMEM161AQ9NX61 479 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 ELOVL5Q9NYP7 299 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 C1RLQ9NZP8 487 aa4.32□□□□□ -1.72
VPS13A-211ENST00000484581 AGO1Q9UL18 857 aaKnown RBP4.32□□□□□ -1.72
VPS13A-211ENST00000484581 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.32□□□□□ -1.72
VPS13A-211ENST00000484581 PRAG1Q86YV5 1406 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 RNF103-CHMP3A0A140T963 221 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 hDV102S1A0JD36 115 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 KBTBD13C9JR72 458 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 RNF103O00237 685 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 TTI1O43156 1089 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 PPIP5K2O43314 1243 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 RGS14O43566 566 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 GPR137BO60478 399 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 STAM2O75886 525 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 C9P02748 559 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 MYL6BP14649 208 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 DESP17661 470 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 EPORP19235 508 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 PSMB4P28070 264 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 C21orf33P30042 268 aaPredicted RBP4.31□□□□□ -1.72
VPS13A-211ENST00000484581 HSD17B3P37058 310 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 RFX5P48382 616 aaPredicted RBP4.31□□□□□ -1.72
VPS13A-211ENST00000484581 OASLQ15646 514 aaKnown RBP4.31□□□□□ -1.72
VPS13A-211ENST00000484581 TRIP6Q15654 476 aaKnown RBP4.31□□□□□ -1.72
VPS13A-211ENST00000484581 TOR1AIP1Q5JTV8 583 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 EFHC1Q5JVL4 640 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.31□□□□□ -1.72
VPS13A-211ENST00000484581 CCNI2Q6ZMN8 369 aaPredicted RBP4.31□□□□□ -1.72
VPS13A-211ENST00000484581 ZNF704Q6ZNC4 412 aaPredicted RBP4.31□□□□□ -1.72
VPS13A-211ENST00000484581 NRARPQ7Z6K4 114 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 TMPRSS11BQ86T26 416 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 FOXP4Q8IVH2 680 aaPredicted RBP4.31□□□□□ -1.72
VPS13A-211ENST00000484581 MAP7D3Q8IWC1 876 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 TMEM199Q8N511 208 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 ANKRD13CQ8N6S4 541 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 ARL6IP6Q8N6S5 226 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 NEXN-AS1Q8NBZ9 246 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 PPFIBP2Q8ND30 876 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 C16orf52Q8NHV5 167 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 NCOA7Q8NI08 942 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 ST7LQ8TDW4 575 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 SLC38A5Q8WUX1 472 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 SSMEM1Q8WWF3 244 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 TAF4BQ92750 862 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 HMCESQ96FZ2 354 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 C5orf30Q96GV9 206 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 KLHL5Q96PQ7 755 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 WACQ9BTA9 647 aa4.31□□□□□ -1.72
VPS13A-211ENST00000484581 LSG1Q9H089 658 aaKnown RBP4.31□□□□□ -1.72
VPS13A-211ENST00000484581 AKIRIN1Q9H9L7 192 aaPredicted RBP4.31□□□□□ -1.72
VPS13A-211ENST00000484581 DNAJC4Q9NNZ3 241 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms