RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 ITGA3P26006 1051 aa12.41□□□□□ -0.42
UBR4-213ENST00000483922 AIMP2Q13155 320 aaKnown RBP12.41□□□□□ -0.42
UBR4-213ENST00000483922 TAF1AQ15573 450 aaPredicted RBP12.41□□□□□ -0.42
UBR4-213ENST00000483922 PRAMEF13Q5VWM6 474 aa12.41□□□□□ -0.42
UBR4-213ENST00000483922 DENND5AQ6IQ26 1287 aa12.41□□□□□ -0.42
UBR4-213ENST00000483922 KIRREL2Q6UWL6 708 aa12.41□□□□□ -0.42
UBR4-213ENST00000483922 ZC3H18Q86VM9 953 aaKnown RBP12.41□□□□□ -0.42
UBR4-213ENST00000483922 PARP9Q8IXQ6 854 aa12.41□□□□□ -0.42
UBR4-213ENST00000483922 NXPE1Q8N323 547 aa12.41□□□□□ -0.42
UBR4-213ENST00000483922 CLDN19Q8N6F1 224 aa12.41□□□□□ -0.42
UBR4-213ENST00000483922 OR5AR1Q8NGP9 310 aa12.41□□□□□ -0.42
UBR4-213ENST00000483922 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.41□□□□□ -0.42
UBR4-213ENST00000483922 TFGQ92734 400 aaPredicted RBP12.41□□□□□ -0.42
UBR4-213ENST00000483922 SPSB2Q99619 263 aa12.41□□□□□ -0.42
UBR4-213ENST00000483922 HGH1Q9BTY7 390 aa12.41□□□□□ -0.42
UBR4-213ENST00000483922 CHRNA10Q9GZZ6 450 aa12.41□□□□□ -0.42
UBR4-213ENST00000483922 GPN3Q9UHW5 284 aaPredicted RBP12.41□□□□□ -0.42
UBR4-213ENST00000483922 FBXL4Q9UKA2 621 aa12.41□□□□□ -0.42
UBR4-213ENST00000483922 KLHL20Q9Y2M5 609 aa12.41□□□□□ -0.42
UBR4-213ENST00000483922 HS3ST3B1Q9Y662 390 aa12.41□□□□□ -0.42
UBR4-213ENST00000483922 ANKRD12Q6UB98 2062 aa12.41□□□□□ -0.42
UBR4-213ENST00000483922 PCM1Q15154 2024 aa12.4□□□□□ -0.42
UBR4-213ENST00000483922 KLHL33A6NCF5 533 aa12.4□□□□□ -0.42
UBR4-213ENST00000483922 CST8O60676 142 aa12.4□□□□□ -0.42
UBR4-213ENST00000483922 SERPINC1P01008 464 aa12.4□□□□□ -0.42
UBR4-213ENST00000483922 TMEM253P0C7T8 217 aa12.4□□□□□ -0.42
UBR4-213ENST00000483922 MMP11P24347 488 aa12.4□□□□□ -0.42
UBR4-213ENST00000483922 ACADLP28330 430 aa12.4□□□□□ -0.42
UBR4-213ENST00000483922 CD151P48509 253 aa12.4□□□□□ -0.42
UBR4-213ENST00000483922 TDGF1P3P51864 188 aa12.4□□□□□ -0.42
UBR4-213ENST00000483922 FANCCQ00597 558 aa12.4□□□□□ -0.42
UBR4-213ENST00000483922 MPP3Q13368 585 aa12.4□□□□□ -0.42
UBR4-213ENST00000483922 ZNF169Q14929 603 aaPredicted RBP12.4□□□□□ -0.42
UBR4-213ENST00000483922 SLC18A3Q16572 532 aa12.4□□□□□ -0.42
UBR4-213ENST00000483922 SHISA6Q6ZSJ9 500 aa12.4□□□□□ -0.42
UBR4-213ENST00000483922 GPR135Q8IZ08 494 aa12.4□□□□□ -0.42
UBR4-213ENST00000483922 DTWD1Q8N5C7 304 aa12.4□□□□□ -0.42
UBR4-213ENST00000483922 PROKR1Q8TCW9 393 aa12.4□□□□□ -0.42
UBR4-213ENST00000483922 ITLN2Q8WWU7 325 aaPredicted RBP12.4□□□□□ -0.42
UBR4-213ENST00000483922 CTNNBL1Q8WYA6 563 aaPredicted RBP12.4□□□□□ -0.42
UBR4-213ENST00000483922 TM9SF4Q92544 642 aa12.4□□□□□ -0.42
UBR4-213ENST00000483922 RELTQ969Z4 430 aa12.4□□□□□ -0.42
UBR4-213ENST00000483922 TAAR6Q96RI8 345 aa12.4□□□□□ -0.42
UBR4-213ENST00000483922 FICDQ9BVA6 458 aa12.4□□□□□ -0.42
UBR4-213ENST00000483922 AP1M1Q9BXS5 423 aa12.4□□□□□ -0.42
UBR4-213ENST00000483922 MVB12BQ9H7P6 319 aa12.4□□□□□ -0.42
UBR4-213ENST00000483922 KLHL8Q9P2G9 620 aaPredicted RBP12.4□□□□□ -0.42
UBR4-213ENST00000483922 NDOR1Q9UHB4 597 aa12.4□□□□□ -0.42
UBR4-213ENST00000483922 PRSS21Q9Y6M0 314 aa12.4□□□□□ -0.42
UBR4-213ENST00000483922 AP1M2Q9Y6Q5 423 aa12.4□□□□□ -0.42
UBR4-213ENST00000483922 ZGRF1Q86YA3 2104 aa12.4□□□□□ -0.43
UBR4-213ENST00000483922 TRBV5-4A0A0C4DH59 114 aa12.39□□□□□ -0.43
UBR4-213ENST00000483922 ZSCAN9O15535 394 aaPredicted RBP12.39□□□□□ -0.43
UBR4-213ENST00000483922 MED26O95402 600 aa12.39□□□□□ -0.43
UBR4-213ENST00000483922 IGHEP01854 428 aa12.39□□□□□ -0.43
UBR4-213ENST00000483922 CHRM5P08912 532 aaPredicted RBP12.39□□□□□ -0.43
UBR4-213ENST00000483922 PYGMP11217 842 aa12.39□□□□□ -0.43
UBR4-213ENST00000483922 TNNT1P13805 278 aa12.39□□□□□ -0.43
UBR4-213ENST00000483922 NR2C2P49116 596 aa12.39□□□□□ -0.43
UBR4-213ENST00000483922 ZNF140P52738 457 aaPredicted RBP12.39□□□□□ -0.43
UBR4-213ENST00000483922 CDC16Q13042 620 aa12.39□□□□□ -0.43
UBR4-213ENST00000483922 NKG7Q16617 165 aa12.39□□□□□ -0.43
UBR4-213ENST00000483922 CYP2A13Q16696 494 aa12.39□□□□□ -0.43
UBR4-213ENST00000483922 LRRC38Q5VT99 294 aa12.39□□□□□ -0.43
UBR4-213ENST00000483922 KAZNQ674X7 775 aa12.39□□□□□ -0.43
UBR4-213ENST00000483922 SARM1Q6SZW1 724 aa12.39□□□□□ -0.43
UBR4-213ENST00000483922 NAPRTQ6XQN6 538 aa12.39□□□□□ -0.43
UBR4-213ENST00000483922 OVCH1Q7RTY7 1134 aa12.39□□□□□ -0.43
UBR4-213ENST00000483922 ZNF295-AS1Q8N0V1 137 aa12.39□□□□□ -0.43
UBR4-213ENST00000483922 HAUS1Q96CS2 278 aa12.39□□□□□ -0.43
UBR4-213ENST00000483922 C17orf62Q9BQA9 187 aa12.39□□□□□ -0.43
UBR4-213ENST00000483922 NAT10Q9H0A0 1025 aaKnown RBP12.39□□□□□ -0.43
UBR4-213ENST00000483922 COPG2Q9UBF2 871 aa12.39□□□□□ -0.43
UBR4-213ENST00000483922 PLAGL1Q9UM63 463 aa12.39□□□□□ -0.43
UBR4-213ENST00000483922 LUC7L2Q9Y383 392 aaKnown RBP12.39□□□□□ -0.43
UBR4-213ENST00000483922 NUP210LQ5VU65 1888 aa12.39□□□□□ -0.43
UBR4-213ENST00000483922 C5orf60A6NFR6 353 aa12.38□□□□□ -0.43
UBR4-213ENST00000483922 C2orf81A6NN90 581 aa12.38□□□□□ -0.43
UBR4-213ENST00000483922 BHMG1C9JSJ3 638 aaPredicted RBP12.38□□□□□ -0.43
UBR4-213ENST00000483922 JRKO75564 520 aa12.38□□□□□ -0.43
UBR4-213ENST00000483922 ALAS2P22557 587 aa12.38□□□□□ -0.43
UBR4-213ENST00000483922 MCM3P25205 808 aa12.38□□□□□ -0.43
UBR4-213ENST00000483922 RBL1P28749 1068 aa12.38□□□□□ -0.43
UBR4-213ENST00000483922 ARHGAP25P42331 645 aa12.38□□□□□ -0.43
UBR4-213ENST00000483922 KCNK10P57789 538 aa12.38□□□□□ -0.43
UBR4-213ENST00000483922 OTUD4Q01804 1114 aaKnown RBP12.38□□□□□ -0.43
UBR4-213ENST00000483922 AGAP7PQ5VUJ5 663 aa12.38□□□□□ -0.43
UBR4-213ENST00000483922 TLDC1Q6P9B6 456 aa12.38□□□□□ -0.43
UBR4-213ENST00000483922 LINC00696Q6ZRV3 163 aa12.38□□□□□ -0.43
UBR4-213ENST00000483922 SERPINA9Q86WD7 417 aa12.38□□□□□ -0.43
UBR4-213ENST00000483922 PIANPQ8IYJ0 282 aa12.38□□□□□ -0.43
UBR4-213ENST00000483922 PSMF1Q92530 271 aa12.38□□□□□ -0.43
UBR4-213ENST00000483922 DCUN1D1Q96GG9 259 aa12.38□□□□□ -0.43
UBR4-213ENST00000483922 LURAP1Q96LR2 239 aa12.38□□□□□ -0.43
UBR4-213ENST00000483922 AGAP4Q96P64 663 aa12.38□□□□□ -0.43
UBR4-213ENST00000483922 QKIQ96PU8 341 aaKnown RBP eCLIP12.38□□□□□ -0.43
UBR4-213ENST00000483922 COPS8Q99627 209 aa12.38□□□□□ -0.43
UBR4-213ENST00000483922 CHP1Q99653 195 aa12.38□□□□□ -0.43
UBR4-213ENST00000483922 TRIM56Q9BRZ2 755 aaKnown RBP12.38□□□□□ -0.43
UBR4-213ENST00000483922 MENTQ9BUN1 341 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms