RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 IL11RAQ14626 422 aa17.46■□□□□ 0.39
HDAC6-225ENST00000483506 KYNUQ16719 465 aa17.46■□□□□ 0.39
HDAC6-225ENST00000483506 D2HGDHQ8N465 521 aa17.46■□□□□ 0.39
HDAC6-225ENST00000483506 ZBTB2Q8N680 514 aa17.46■□□□□ 0.39
HDAC6-225ENST00000483506 HNRNPLLQ8WVV9 542 aaKnown RBP17.46■□□□□ 0.39
HDAC6-225ENST00000483506 NRTNQ99748 197 aa17.46■□□□□ 0.39
HDAC6-225ENST00000483506 PITPNM3Q9BZ71 974 aa17.46■□□□□ 0.39
HDAC6-225ENST00000483506 APMAPQ9HDC9 416 aa17.46■□□□□ 0.39
HDAC6-225ENST00000483506 C1GALT1Q9NS00 363 aa17.46■□□□□ 0.39
HDAC6-225ENST00000483506 IARS2Q9NSE4 1012 aaKnown RBP17.46■□□□□ 0.39
HDAC6-225ENST00000483506 GRHL1Q9NZI5 618 aa17.46■□□□□ 0.39
HDAC6-225ENST00000483506 ZC3H7BQ9UGR2 993 aaKnown RBP17.46■□□□□ 0.39
HDAC6-225ENST00000483506 CHMP2BQ9UQN3 213 aa17.46■□□□□ 0.39
HDAC6-225ENST00000483506 BTRCQ9Y297 605 aa17.46■□□□□ 0.39
HDAC6-225ENST00000483506 PCDHB11Q9Y5F2 797 aa17.46■□□□□ 0.39
HDAC6-225ENST00000483506 FAM208BQ5VWN6 2430 aa17.45■□□□□ 0.38
HDAC6-225ENST00000483506 STMND1H3BQB6 276 aa17.45■□□□□ 0.38
HDAC6-225ENST00000483506 POLR1CO15160 346 aaPredicted RBP17.45■□□□□ 0.38
HDAC6-225ENST00000483506 KLK10O43240 276 aa17.45■□□□□ 0.38
HDAC6-225ENST00000483506 KRT37O76014 449 aa17.45■□□□□ 0.38
HDAC6-225ENST00000483506 MATN4O95460 622 aa17.45■□□□□ 0.38
HDAC6-225ENST00000483506 ZBTB11O95625 1053 aaPredicted RBP17.45■□□□□ 0.38
HDAC6-225ENST00000483506 F7P08709 466 aaPredicted RBP17.45■□□□□ 0.38
HDAC6-225ENST00000483506 CHRM3P20309 590 aa17.45■□□□□ 0.38
HDAC6-225ENST00000483506 SEPHS1P49903 392 aa17.45■□□□□ 0.38
HDAC6-225ENST00000483506 UCNP55089 124 aa17.45■□□□□ 0.38
HDAC6-225ENST00000483506 SH3BP2P78314 561 aa17.45■□□□□ 0.38
HDAC6-225ENST00000483506 HSD11B2P80365 405 aa17.45■□□□□ 0.38
HDAC6-225ENST00000483506 ABRQ12979 859 aa17.45■□□□□ 0.38
HDAC6-225ENST00000483506 CALCOCO2Q13137 446 aa17.45■□□□□ 0.38
HDAC6-225ENST00000483506 GRB7Q14451 532 aa17.45■□□□□ 0.38
HDAC6-225ENST00000483506 CYB5D1Q6P9G0 228 aa17.45■□□□□ 0.38
HDAC6-225ENST00000483506 ZFAND4Q86XD8 727 aa17.45■□□□□ 0.38
HDAC6-225ENST00000483506 GSDMBQ8TAX9 411 aa17.45■□□□□ 0.38
HDAC6-225ENST00000483506 NAF1Q96HR8 494 aaKnown RBP17.45■□□□□ 0.38
HDAC6-225ENST00000483506 PHACTR1Q9C0D0 580 aa17.45■□□□□ 0.38
HDAC6-225ENST00000483506 RAB17Q9H0T7 212 aa17.45■□□□□ 0.38
HDAC6-225ENST00000483506 XKR8Q9H6D3 395 aa17.45■□□□□ 0.38
HDAC6-225ENST00000483506 GALPQ9UBC7 116 aa17.45■□□□□ 0.38
HDAC6-225ENST00000483506 UTP11Q9Y3A2 253 aaKnown RBP17.45■□□□□ 0.38
HDAC6-225ENST00000483506 MRFAP1Q9Y605 127 aa17.45■□□□□ 0.38
HDAC6-225ENST00000483506 C2orf74A8MZ97 194 aa17.44■□□□□ 0.38
HDAC6-225ENST00000483506 E5RI56 91 aa17.44■□□□□ 0.38
HDAC6-225ENST00000483506 EIF3HO15372 352 aaKnown RBP eCLIP17.44■□□□□ 0.38
HDAC6-225ENST00000483506 URI1O94763 535 aaPredicted RBP17.44■□□□□ 0.38
HDAC6-225ENST00000483506 HAUS5O94927 633 aa17.44■□□□□ 0.38
HDAC6-225ENST00000483506 FGF5P12034 268 aa17.44■□□□□ 0.38
HDAC6-225ENST00000483506 GABRB3P28472 473 aa17.44■□□□□ 0.38
HDAC6-225ENST00000483506 PRDX3P30048 256 aaKnown RBP17.44■□□□□ 0.38
HDAC6-225ENST00000483506 PKLRP30613 574 aa17.44■□□□□ 0.38
HDAC6-225ENST00000483506 RAB28P51157 221 aa17.44■□□□□ 0.38
HDAC6-225ENST00000483506 PDIA2Q13087 525 aaKnown RBP17.44■□□□□ 0.38
HDAC6-225ENST00000483506 TUBB2AQ13885 445 aa17.44■□□□□ 0.38
HDAC6-225ENST00000483506 COL28A1Q2UY09 1125 aa17.44■□□□□ 0.38
HDAC6-225ENST00000483506 TEDDM1Q5T9Z0 273 aa17.44■□□□□ 0.38
HDAC6-225ENST00000483506 CNSTQ6PJW8 725 aa17.44■□□□□ 0.38
HDAC6-225ENST00000483506 NEK10Q6ZWH5 1172 aa17.44■□□□□ 0.38
HDAC6-225ENST00000483506 FBXO36Q8NEA4 188 aa17.44■□□□□ 0.38
HDAC6-225ENST00000483506 GIMAP7Q8NHV1 300 aa17.44■□□□□ 0.38
HDAC6-225ENST00000483506 FLVCR1-AS1Q8TAF5 88 aa17.44■□□□□ 0.38
HDAC6-225ENST00000483506 SNRNP27Q8WVK2 155 aaKnown RBP17.44■□□□□ 0.38
HDAC6-225ENST00000483506 AARSD1Q9BTE6 412 aaKnown RBP17.44■□□□□ 0.38
HDAC6-225ENST00000483506 TUBB2BQ9BVA1 445 aa17.44■□□□□ 0.38
HDAC6-225ENST00000483506 CCDC68Q9H2F9 335 aa17.44■□□□□ 0.38
HDAC6-225ENST00000483506 DPH5Q9H2P9 285 aa17.44■□□□□ 0.38
HDAC6-225ENST00000483506 ACTR10Q9NZ32 417 aa17.44■□□□□ 0.38
HDAC6-225ENST00000483506 TDRKHQ9Y2W6 561 aaKnown RBP17.44■□□□□ 0.38
HDAC6-225ENST00000483506 TMEM184BQ9Y519 407 aaPredicted RBP17.44■□□□□ 0.38
HDAC6-225ENST00000483506 PIPSLA2A3N6 862 aa17.43■□□□□ 0.38
HDAC6-225ENST00000483506 GSAPA4D1B5 854 aa17.43■□□□□ 0.38
HDAC6-225ENST00000483506 C1orf105O95561 183 aa17.43■□□□□ 0.38
HDAC6-225ENST00000483506 CHRM5P08912 532 aaPredicted RBP17.43■□□□□ 0.38
HDAC6-225ENST00000483506 MSL3P1P0C860 447 aa17.43■□□□□ 0.38
HDAC6-225ENST00000483506 CD9P21926 228 aa17.43■□□□□ 0.38
HDAC6-225ENST00000483506 CCNFP41002 786 aa17.43■□□□□ 0.38
HDAC6-225ENST00000483506 CAV1Q03135 178 aa17.43■□□□□ 0.38
HDAC6-225ENST00000483506 KIR2DS3Q14952 304 aa17.43■□□□□ 0.38
HDAC6-225ENST00000483506 FASTKD3Q14CZ7 662 aaKnown RBP17.43■□□□□ 0.38
HDAC6-225ENST00000483506 TTLL9Q3SXZ7 439 aa17.43■□□□□ 0.38
HDAC6-225ENST00000483506 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.43■□□□□ 0.38
HDAC6-225ENST00000483506 HP1BP3Q5SSJ5 553 aaPredicted RBP17.43■□□□□ 0.38
HDAC6-225ENST00000483506 BROXQ5VW32 411 aa17.43■□□□□ 0.38
HDAC6-225ENST00000483506 TRMT10BQ6PF06 316 aaKnown RBP17.43■□□□□ 0.38
HDAC6-225ENST00000483506 C19orf48Q6RUI8 117 aa17.43■□□□□ 0.38
HDAC6-225ENST00000483506 SPESP1Q6UW49 350 aa17.43■□□□□ 0.38
HDAC6-225ENST00000483506 BPHLQ86WA6 291 aaPredicted RBP17.43■□□□□ 0.38
HDAC6-225ENST00000483506 SIDT2Q8NBJ9 832 aaKnown RBP17.43■□□□□ 0.38
HDAC6-225ENST00000483506 SEC14L1Q92503 715 aa17.43■□□□□ 0.38
HDAC6-225ENST00000483506 FAM136AQ96C01 138 aa17.43■□□□□ 0.38
HDAC6-225ENST00000483506 CFAP36Q96G28 342 aa17.43■□□□□ 0.38
HDAC6-225ENST00000483506 PPM1MQ96MI6 270 aa17.43■□□□□ 0.38
HDAC6-225ENST00000483506 FCRL4Q96PJ5 515 aa17.43■□□□□ 0.38
HDAC6-225ENST00000483506 OR6C1Q96RD1 312 aa17.43■□□□□ 0.38
HDAC6-225ENST00000483506 SLC30A3Q99726 388 aa17.43■□□□□ 0.38
HDAC6-225ENST00000483506 CTRCQ99895 268 aa17.43■□□□□ 0.38
HDAC6-225ENST00000483506 RAB11FIP5Q9BXF6 653 aa17.43■□□□□ 0.38
HDAC6-225ENST00000483506 CHRNA10Q9GZZ6 450 aa17.43■□□□□ 0.38
HDAC6-225ENST00000483506 PRORYQ9H606 182 aa17.43■□□□□ 0.38
HDAC6-225ENST00000483506 MOCS1Q9NZB8 636 aa17.43■□□□□ 0.38
HDAC6-225ENST00000483506 PILRAQ9UKJ1 303 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms