RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 GP1BAP07359 652 aa17.33■□□□□ 0.37
CPNE1-224ENST00000483359 PNLIPP16233 465 aa17.33■□□□□ 0.37
CPNE1-224ENST00000483359 CRABP2P29373 138 aa17.33■□□□□ 0.37
CPNE1-224ENST00000483359 NR1D2Q14995 579 aa17.33■□□□□ 0.37
CPNE1-224ENST00000483359 TAF1BQ53T94 588 aaPredicted RBP17.33■□□□□ 0.37
CPNE1-224ENST00000483359 USP53Q70EK8 1073 aa17.33■□□□□ 0.37
CPNE1-224ENST00000483359 TBC1D1Q86TI0 1168 aaPredicted RBP17.33■□□□□ 0.37
CPNE1-224ENST00000483359 LCN9Q8WX39 176 aa17.33■□□□□ 0.37
CPNE1-224ENST00000483359 ASB11Q8WXH4 323 aa17.33■□□□□ 0.37
CPNE1-224ENST00000483359 DLG3Q92796 817 aa17.33■□□□□ 0.37
CPNE1-224ENST00000483359 IL17FQ96PD4 163 aa17.33■□□□□ 0.37
CPNE1-224ENST00000483359 TLK1Q9UKI8 766 aa17.33■□□□□ 0.37
CPNE1-224ENST00000483359 CDC7O00311 574 aa17.33■□□□□ 0.36
CPNE1-224ENST00000483359 RASGRF2O14827 1237 aa17.33■□□□□ 0.36
CPNE1-224ENST00000483359 UBXN7O94888 489 aa17.33■□□□□ 0.36
CPNE1-224ENST00000483359 TOP3BO95985 862 aaKnown RBP17.33■□□□□ 0.36
CPNE1-224ENST00000483359 TPBGLP0DKB5 382 aa17.33■□□□□ 0.36
CPNE1-224ENST00000483359 AMD1P17707 334 aa17.33■□□□□ 0.36
CPNE1-224ENST00000483359 GPR3P46089 330 aa17.33■□□□□ 0.36
CPNE1-224ENST00000483359 TTC23LQ6PF05 361 aa17.33■□□□□ 0.36
CPNE1-224ENST00000483359 TAX1BP1Q86VP1 789 aa17.33■□□□□ 0.36
CPNE1-224ENST00000483359 CYP4X1Q8N118 509 aa17.33■□□□□ 0.36
CPNE1-224ENST00000483359 PCMTD2Q9NV79 361 aa17.33■□□□□ 0.36
CPNE1-224ENST00000483359 UTP6Q9NYH9 597 aaKnown RBP17.33■□□□□ 0.36
CPNE1-224ENST00000483359 POLG2Q9UHN1 485 aa17.33■□□□□ 0.36
CPNE1-224ENST00000483359 ICKQ9UPZ9 632 aa17.33■□□□□ 0.36
CPNE1-224ENST00000483359 ACOT9Q9Y305 439 aa17.33■□□□□ 0.36
CPNE1-224ENST00000483359 CDH16O75309 829 aa17.32■□□□□ 0.36
CPNE1-224ENST00000483359 KRT15P19012 456 aa17.32■□□□□ 0.36
CPNE1-224ENST00000483359 MAP4P27816 1152 aaKnown RBP17.32■□□□□ 0.36
CPNE1-224ENST00000483359 DLG1Q12959 904 aa17.32■□□□□ 0.36
CPNE1-224ENST00000483359 GRB7Q14451 532 aa17.32■□□□□ 0.36
CPNE1-224ENST00000483359 TSNQ15631 228 aaKnown RBP17.32■□□□□ 0.36
CPNE1-224ENST00000483359 PHKG1Q16816 387 aa17.32■□□□□ 0.36
CPNE1-224ENST00000483359 MBOAT1Q6ZNC8 495 aa17.32■□□□□ 0.36
CPNE1-224ENST00000483359 C2orf73Q8N5S3 287 aaPredicted RBP17.32■□□□□ 0.36
CPNE1-224ENST00000483359 KCTD4Q8WVF5 259 aa17.32■□□□□ 0.36
CPNE1-224ENST00000483359 HNRNPLLQ8WVV9 542 aaKnown RBP17.32■□□□□ 0.36
CPNE1-224ENST00000483359 NCSTNQ92542 709 aa17.32■□□□□ 0.36
CPNE1-224ENST00000483359 ZIM3Q96PE6 472 aa17.32■□□□□ 0.36
CPNE1-224ENST00000483359 NUDT22Q9BRQ3 303 aa17.32■□□□□ 0.36
CPNE1-224ENST00000483359 LRRN3Q9H3W5 708 aa17.32■□□□□ 0.36
CPNE1-224ENST00000483359 SRMSQ9H3Y6 488 aa17.32■□□□□ 0.36
CPNE1-224ENST00000483359 APOBEC2Q9Y235 224 aaKnown RBP17.32■□□□□ 0.36
CPNE1-224ENST00000483359 OR6C74A6NCV1 312 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 GOLGA8RI6L899 631 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 DUX1O43812 170 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 ZBTB14O43829 449 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 OPA1O60313 960 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 PROS1P07225 676 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 CD1DP15813 335 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 MPSTP25325 297 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 CSF2RBP32927 897 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 CCNFP41002 786 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 GLRBP48167 497 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 PUM1Q14671 1186 aaKnown RBP eCLIP17.31■□□□□ 0.36
CPNE1-224ENST00000483359 FBXO38Q6PIJ6 1188 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 AMIGO1Q86WK6 493 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 CENPLQ8N0S6 344 aaPredicted RBP17.31■□□□□ 0.36
CPNE1-224ENST00000483359 ISL2Q96A47 359 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 RAD51AP1Q96B01 352 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 MTBPQ96DY7 904 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 UBXN10Q96LJ8 280 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 GFM1Q96RP9 751 aaKnown RBP17.31■□□□□ 0.36
CPNE1-224ENST00000483359 UCK1Q9HA47 277 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 PPCSQ9HAB8 311 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 ARGLU1Q9NWB6 273 aaPredicted RBP17.31■□□□□ 0.36
CPNE1-224ENST00000483359 EURLQ9NYK6 297 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 OGFRQ9NZT2 677 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 KLHL3Q9UH77 587 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 PCDHGA1Q9Y5H4 931 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 SPTBN4Q9H254 2564 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 A0A087X1B8 175 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 UQCRHLA0A096LP55 91 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 GFYI3L273 518 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 AGRPO00253 132 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 RFPL1O75677 317 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 C8GP07360 202 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 UQCRHP07919 91 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 CYP2A7P20853 494 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 CD1CP29017 333 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 MAGEA12P43365 314 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 ID4P47928 161 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 CSRP3P50461 194 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 EPHA4P54764 986 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 PPP1CAP62136 330 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 GPLD1P80108 840 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 ZNF844Q08AG5 666 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 ILKQ13418 452 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 SPIDRQ14159 915 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 TMPRSS9Q7Z410 1059 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 TDRPQ86YL5 185 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 MAGEC3Q8TD91 643 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 MZB1Q8WU39 189 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 EXT2Q93063 718 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 NXNL1Q96CM4 212 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 PDLIM5Q96HC4 596 aaKnown RBP17.31■□□□□ 0.36
CPNE1-224ENST00000483359 DERL2Q9GZP9 239 aa17.31■□□□□ 0.36
CPNE1-224ENST00000483359 TFB2MQ9H5Q4 396 aaKnown RBP17.31■□□□□ 0.36
CPNE1-224ENST00000483359 TMEM9Q9P0T7 183 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms