RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 L2HGDHQ9H9P8 463 aa20.3■□□□□ 0.84
SEC13-217ENST00000482647 ASCL3Q9NQ33 180 aa20.3■□□□□ 0.84
SEC13-217ENST00000482647 OR6C2Q9NZP2 312 aa20.3■□□□□ 0.84
SEC13-217ENST00000482647 TRMT6Q9UJA5 497 aaKnown RBP20.3■□□□□ 0.84
SEC13-217ENST00000482647 ICKQ9UPZ9 632 aa20.3■□□□□ 0.84
SEC13-217ENST00000482647 VWA7Q9Y334 891 aa20.3■□□□□ 0.84
SEC13-217ENST00000482647 GSAPA4D1B5 854 aa20.29■□□□□ 0.84
SEC13-217ENST00000482647 EFCAB7A8K855 629 aa20.29■□□□□ 0.84
SEC13-217ENST00000482647 B4E171 279 aa20.29■□□□□ 0.84
SEC13-217ENST00000482647 BTN3A3O00478 584 aa20.29■□□□□ 0.84
SEC13-217ENST00000482647 BTN3A1O00481 513 aa20.29■□□□□ 0.84
SEC13-217ENST00000482647 ZNF500O60304 480 aaPredicted RBP20.29■□□□□ 0.84
SEC13-217ENST00000482647 SPAG6O75602 509 aa20.29■□□□□ 0.84
SEC13-217ENST00000482647 MATN4O95460 622 aa20.29■□□□□ 0.84
SEC13-217ENST00000482647 TPBGLP0DKB5 382 aa20.29■□□□□ 0.84
SEC13-217ENST00000482647 FGF3P11487 239 aaPredicted RBP20.29■□□□□ 0.84
SEC13-217ENST00000482647 ENO3P13929 434 aaPredicted RBP20.29■□□□□ 0.84
SEC13-217ENST00000482647 ITIH1P19827 911 aa20.29■□□□□ 0.84
SEC13-217ENST00000482647 CD9P21926 228 aa20.29■□□□□ 0.84
SEC13-217ENST00000482647 TSPAN7P41732 249 aa20.29■□□□□ 0.84
SEC13-217ENST00000482647 ABCG1P45844 678 aa20.29■□□□□ 0.84
SEC13-217ENST00000482647 GPX6P59796 221 aa20.29■□□□□ 0.84
SEC13-217ENST00000482647 PPP1CAP62136 330 aa20.29■□□□□ 0.84
SEC13-217ENST00000482647 KLHL38Q2WGJ6 581 aa20.29■□□□□ 0.84
SEC13-217ENST00000482647 TMEM164Q5U3C3 297 aa20.29■□□□□ 0.84
SEC13-217ENST00000482647 IFT20Q8IY31 132 aa20.29■□□□□ 0.84
SEC13-217ENST00000482647 GPATCH11Q8N954 259 aa20.29■□□□□ 0.84
SEC13-217ENST00000482647 GIMAP7Q8NHV1 300 aa20.29■□□□□ 0.84
SEC13-217ENST00000482647 CD200R1Q8TD46 325 aa20.29■□□□□ 0.84
SEC13-217ENST00000482647 UBXN4Q92575 508 aa20.29■□□□□ 0.84
SEC13-217ENST00000482647 FGF11Q92914 225 aa20.29■□□□□ 0.84
SEC13-217ENST00000482647 RAD51AP1Q96B01 352 aa20.29■□□□□ 0.84
SEC13-217ENST00000482647 SLC30A3Q99726 388 aa20.29■□□□□ 0.84
SEC13-217ENST00000482647 LRRC4CQ9HCJ2 640 aa20.29■□□□□ 0.84
SEC13-217ENST00000482647 OCIAD1Q9NX40 245 aa20.29■□□□□ 0.84
SEC13-217ENST00000482647 TSR3Q9UJK0 312 aaKnown RBP20.29■□□□□ 0.84
SEC13-217ENST00000482647 PCDHGA7Q9Y5G6 932 aa20.29■□□□□ 0.84
SEC13-217ENST00000482647 PSAT1Q9Y617 370 aa20.29■□□□□ 0.84
SEC13-217ENST00000482647 NFS1Q9Y697 457 aa20.29■□□□□ 0.84
SEC13-217ENST00000482647 TLCD2A6NGC4 264 aa20.28■□□□□ 0.84
SEC13-217ENST00000482647 C2orf74A8MZ97 194 aa20.28■□□□□ 0.84
SEC13-217ENST00000482647 EIF3FO00303 357 aaPredicted RBP20.28■□□□□ 0.84
SEC13-217ENST00000482647 C1orf105O95561 183 aa20.28■□□□□ 0.84
SEC13-217ENST00000482647 SEPHS1P49903 392 aa20.28■□□□□ 0.84
SEC13-217ENST00000482647 RAB28P51157 221 aa20.28■□□□□ 0.84
SEC13-217ENST00000482647 MAPK10P53779 464 aa20.28■□□□□ 0.84
SEC13-217ENST00000482647 CDKN2DP55273 166 aa20.28■□□□□ 0.84
SEC13-217ENST00000482647 CUL1Q13616 776 aa20.28■□□□□ 0.84
SEC13-217ENST00000482647 KYNUQ16719 465 aa20.28■□□□□ 0.84
SEC13-217ENST00000482647 RBM20Q5T481 1227 aaKnown RBP20.28■□□□□ 0.84
SEC13-217ENST00000482647 HECTD2Q5U5R9 776 aa20.28■□□□□ 0.84
SEC13-217ENST00000482647 PROSER1Q86XN7 944 aa20.28■□□□□ 0.84
SEC13-217ENST00000482647 ADGRF3Q8IZF5 1079 aa20.28■□□□□ 0.84
SEC13-217ENST00000482647 CARFQ8N187 725 aa20.28■□□□□ 0.84
SEC13-217ENST00000482647 RAB42Q8N4Z0 105 aa20.28■□□□□ 0.84
SEC13-217ENST00000482647 KLHL6Q8WZ60 621 aa20.28■□□□□ 0.84
SEC13-217ENST00000482647 TAAR9Q96RI9 348 aa20.28■□□□□ 0.84
SEC13-217ENST00000482647 NRTNQ99748 197 aa20.28■□□□□ 0.84
SEC13-217ENST00000482647 B3GNT4Q9C0J1 378 aa20.28■□□□□ 0.84
SEC13-217ENST00000482647 SLC39A1Q9NY26 324 aa20.28■□□□□ 0.84
SEC13-217ENST00000482647 SEMA5BQ9P283 1151 aa20.28■□□□□ 0.84
SEC13-217ENST00000482647 TXNDC16Q9P2K2 825 aa20.28■□□□□ 0.84
SEC13-217ENST00000482647 PLAGL1Q9UM63 463 aa20.28■□□□□ 0.84
SEC13-217ENST00000482647 RUVBL2Q9Y230 463 aaKnown RBP20.28■□□□□ 0.84
SEC13-217ENST00000482647 CDRT15L2A8MXV6 281 aa20.27■□□□□ 0.84
SEC13-217ENST00000482647 NVLO15381 856 aaKnown RBP20.27■□□□□ 0.84
SEC13-217ENST00000482647 MPC1LP0DKB6 136 aa20.27■□□□□ 0.84
SEC13-217ENST00000482647 MCM3P25205 808 aa20.27■□□□□ 0.84
SEC13-217ENST00000482647 STX2P32856 288 aa20.27■□□□□ 0.84
SEC13-217ENST00000482647 ETV5P41161 510 aa20.27■□□□□ 0.84
SEC13-217ENST00000482647 TIAL1Q01085 375 aaKnown RBP eCLIP20.27■□□□□ 0.84
SEC13-217ENST00000482647 LRRC8EQ6NSJ5 796 aa20.27■□□□□ 0.84
SEC13-217ENST00000482647 FAM45BPQ6NSW5 357 aa20.27■□□□□ 0.84
SEC13-217ENST00000482647 CLEC14AQ86T13 490 aa20.27■□□□□ 0.84
SEC13-217ENST00000482647 ZC3HC1Q86WB0 502 aaKnown RBP20.27■□□□□ 0.84
SEC13-217ENST00000482647 KMT5CQ86Y97 462 aa20.27■□□□□ 0.84
SEC13-217ENST00000482647 RELL1Q8IUW5 271 aa20.27■□□□□ 0.84
SEC13-217ENST00000482647 CPNE9Q8IYJ1 553 aa20.27■□□□□ 0.84
SEC13-217ENST00000482647 FAM45AQ8TCE6 357 aa20.27■□□□□ 0.84
SEC13-217ENST00000482647 USP7Q93009 1102 aa20.27■□□□□ 0.84
SEC13-217ENST00000482647 FMO2Q99518 471 aa20.27■□□□□ 0.84
SEC13-217ENST00000482647 MAP3K3Q99759 626 aa20.27■□□□□ 0.84
SEC13-217ENST00000482647 RAB11FIP5Q9BXF6 653 aa20.27■□□□□ 0.84
SEC13-217ENST00000482647 SMYD2Q9NRG4 433 aa20.27■□□□□ 0.84
SEC13-217ENST00000482647 POMT2Q9UKY4 750 aa20.27■□□□□ 0.84
SEC13-217ENST00000482647 SLC39A10Q9ULF5 831 aa20.27■□□□□ 0.84
SEC13-217ENST00000482647 IGHV5-51A0A0C4DH38 117 aa20.26■□□□□ 0.83
SEC13-217ENST00000482647 PIPSLA2A3N6 862 aa20.26■□□□□ 0.83
SEC13-217ENST00000482647 FAM159BA6NKW6 160 aa20.26■□□□□ 0.83
SEC13-217ENST00000482647 PSIP1O75475 530 aaKnown RBP20.26■□□□□ 0.83
SEC13-217ENST00000482647 CATP04040 527 aaKnown RBP20.26■□□□□ 0.83
SEC13-217ENST00000482647 CHRM5P08912 532 aaPredicted RBP20.26■□□□□ 0.83
SEC13-217ENST00000482647 RHOXF2BP0C7M4 288 aa20.26■□□□□ 0.83
SEC13-217ENST00000482647 NELFEP18615 380 aaKnown RBP20.26■□□□□ 0.83
SEC13-217ENST00000482647 PRDX3P30048 256 aaKnown RBP20.26■□□□□ 0.83
SEC13-217ENST00000482647 ARL4DP49703 201 aa20.26■□□□□ 0.83
SEC13-217ENST00000482647 RGS4P49798 205 aa20.26■□□□□ 0.83
SEC13-217ENST00000482647 KPNA2P52292 529 aaKnown RBP20.26■□□□□ 0.83
SEC13-217ENST00000482647 RAB15P59190 212 aa20.26■□□□□ 0.83
SEC13-217ENST00000482647 MC2RQ01718 297 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms