RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 TCTN2Q96GX1 697 aa13.01□□□□□ -0.33
CTDSP1-208ENST00000482272 TRIM55Q9BYV6 548 aa13.01□□□□□ -0.33
CTDSP1-208ENST00000482272 ING2Q9H160 280 aa13.01□□□□□ -0.33
CTDSP1-208ENST00000482272 RAB6BQ9NRW1 208 aa13.01□□□□□ -0.33
CTDSP1-208ENST00000482272 PCMTD2Q9NV79 361 aa13.01□□□□□ -0.33
CTDSP1-208ENST00000482272 OR6C2Q9NZP2 312 aa13.01□□□□□ -0.33
CTDSP1-208ENST00000482272 PAK5Q9P286 719 aa13.01□□□□□ -0.33
CTDSP1-208ENST00000482272 TCFL5Q9UL49 500 aa13.01□□□□□ -0.33
CTDSP1-208ENST00000482272 ICKQ9UPZ9 632 aa13.01□□□□□ -0.33
CTDSP1-208ENST00000482272 TDRKHQ9Y2W6 561 aaKnown RBP13.01□□□□□ -0.33
CTDSP1-208ENST00000482272 RELNP78509 3460 aa13□□□□□ -0.33
CTDSP1-208ENST00000482272 TLN1Q9Y490 2541 aaKnown RBP13□□□□□ -0.33
CTDSP1-208ENST00000482272 ZNF749O43361 778 aa13□□□□□ -0.33
CTDSP1-208ENST00000482272 DNAJB5O75953 348 aa13□□□□□ -0.33
CTDSP1-208ENST00000482272 CHRM5P08912 532 aaPredicted RBP13□□□□□ -0.33
CTDSP1-208ENST00000482272 CD63P08962 238 aa13□□□□□ -0.33
CTDSP1-208ENST00000482272 ZSCAN5DPP0CG00 497 aa13□□□□□ -0.33
CTDSP1-208ENST00000482272 TPBGLP0DKB5 382 aa13□□□□□ -0.33
CTDSP1-208ENST00000482272 PVRP15151 417 aa13□□□□□ -0.33
CTDSP1-208ENST00000482272 RORAP35398 523 aa13□□□□□ -0.33
CTDSP1-208ENST00000482272 PRAMEP78395 509 aa13□□□□□ -0.33
CTDSP1-208ENST00000482272 SNX1Q13596 522 aa13□□□□□ -0.33
CTDSP1-208ENST00000482272 IL10RAQ13651 578 aa13□□□□□ -0.33
CTDSP1-208ENST00000482272 SEMA3AQ14563 771 aa13□□□□□ -0.33
CTDSP1-208ENST00000482272 RPS6KA1Q15418 735 aa13□□□□□ -0.33
CTDSP1-208ENST00000482272 LCN10Q6JVE6 187 aa13□□□□□ -0.33
CTDSP1-208ENST00000482272 CDHR3Q6ZTQ4 885 aa13□□□□□ -0.33
CTDSP1-208ENST00000482272 ATCAYQ86WG3 371 aa13□□□□□ -0.33
CTDSP1-208ENST00000482272 SYTL1Q8IYJ3 562 aa13□□□□□ -0.33
CTDSP1-208ENST00000482272 PPHLN1Q8NEY8 458 aaKnown RBP13□□□□□ -0.33
CTDSP1-208ENST00000482272 PEX13Q92968 403 aa13□□□□□ -0.33
CTDSP1-208ENST00000482272 SGSM3Q96HU1 749 aa13□□□□□ -0.33
CTDSP1-208ENST00000482272 OR2A14Q96R47 310 aa13□□□□□ -0.33
CTDSP1-208ENST00000482272 SLC25A23Q9BV35 468 aa13□□□□□ -0.33
CTDSP1-208ENST00000482272 CARD6Q9BX69 1037 aa13□□□□□ -0.33
CTDSP1-208ENST00000482272 CASS4Q9NQ75 786 aa13□□□□□ -0.33
CTDSP1-208ENST00000482272 G3BP2Q9UN86 482 aaKnown RBP13□□□□□ -0.33
CTDSP1-208ENST00000482272 PCDHGA9Q9Y5G4 932 aaKnown RBP13□□□□□ -0.33
CTDSP1-208ENST00000482272 AP1M2Q9Y6Q5 423 aa13□□□□□ -0.33
CTDSP1-208ENST00000482272 ISM1B1AKI9 464 aa12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 C9J4A7 227 aa12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 BHMG1C9JSJ3 638 aaPredicted RBP12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 AP3B1O00203 1094 aa12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 OR1I1O60431 355 aa12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 OR2B3O76000 313 aa12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 TMEM63AO94886 807 aa12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 RPN2P04844 631 aa12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 APRTP07741 180 aa12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 UGT2B7P16662 529 aa12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 PGDP52209 483 aa12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 ACVR1Q04771 509 aa12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 HSPA14Q0VDF9 509 aa12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 UBAP2LQ14157 1087 aaKnown RBP12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 CCNG2Q16589 344 aa12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 DNAJC21Q5F1R6 531 aaKnown RBP12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 ZNF789Q5FWF6 425 aa12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 AARS2Q5JTZ9 985 aaKnown RBP12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 PCID2Q5JVF3 399 aa12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 MEI1Q5TIA1 1274 aa12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 FAM69BQ5VUD6 431 aa12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 C4orf22Q6V702 233 aa12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 MED25Q71SY5 747 aa12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 ZNF534Q76KX8 674 aa12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 C19orf47Q8N9M1 422 aaKnown RBP12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 LKAAEAR1Q8TD35 194 aa12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 ADAMTS17Q8TE56 1095 aa12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 ASZ1Q8WWH4 475 aa12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 C17orf62Q9BQA9 187 aa12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 DHRS4Q9BTZ2 278 aa12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 AP1M1Q9BXS5 423 aa12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 CHRNA10Q9GZZ6 450 aa12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 DRG1Q9Y295 367 aaKnown RBP12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 PADI2Q9Y2J8 665 aa12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 TCAF1Q9Y4C2 921 aa12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 PCDHGB7Q9Y5F8 929 aa12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 MYO18BQ8IUG5 2567 aa12.99□□□□□ -0.33
CTDSP1-208ENST00000482272 UBR5O95071 2799 aaPredicted RBP12.98□□□□□ -0.33
CTDSP1-208ENST00000482272 SNRNP200O75643 2136 aaKnown RBP12.98□□□□□ -0.33
CTDSP1-208ENST00000482272 FER1L5A0AVI2 2057 aa12.98□□□□□ -0.33
CTDSP1-208ENST00000482272 TNRC6AQ8NDV7 1962 aaKnown RBP12.98□□□□□ -0.33
CTDSP1-208ENST00000482272 A0A0J9YY10 115 aa12.98□□□□□ -0.33
CTDSP1-208ENST00000482272 HCRTR1O43613 425 aa12.98□□□□□ -0.33
CTDSP1-208ENST00000482272 APOA4P06727 396 aa12.98□□□□□ -0.33
CTDSP1-208ENST00000482272 PTGIRP43119 386 aa12.98□□□□□ -0.33
CTDSP1-208ENST00000482272 RRADP55042 308 aa12.98□□□□□ -0.33
CTDSP1-208ENST00000482272 CSE1LP55060 971 aaKnown RBP12.98□□□□□ -0.33
CTDSP1-208ENST00000482272 MLLT10P55197 1068 aa12.98□□□□□ -0.33
CTDSP1-208ENST00000482272 CHAF1BQ13112 559 aa12.98□□□□□ -0.33
CTDSP1-208ENST00000482272 KIR2DS3Q14952 304 aa12.98□□□□□ -0.33
CTDSP1-208ENST00000482272 PTCHD3Q3KNS1 767 aa12.98□□□□□ -0.33
CTDSP1-208ENST00000482272 TLDC1Q6P9B6 456 aa12.98□□□□□ -0.33
CTDSP1-208ENST00000482272 RAB43Q86YS6 212 aa12.98□□□□□ -0.33
CTDSP1-208ENST00000482272 SLC22A15Q8IZD6 547 aa12.98□□□□□ -0.33
CTDSP1-208ENST00000482272 TMEM102Q8N9M5 508 aaPredicted RBP12.98□□□□□ -0.33
CTDSP1-208ENST00000482272 LMNTD1Q8N9Z9 388 aa12.98□□□□□ -0.33
CTDSP1-208ENST00000482272 MAIP1Q8WWC4 291 aa12.98□□□□□ -0.33
CTDSP1-208ENST00000482272 SLC22A18Q96BI1 424 aa12.98□□□□□ -0.33
CTDSP1-208ENST00000482272 FAM60AQ9NP50 221 aa12.98□□□□□ -0.33
CTDSP1-208ENST00000482272 MLXIPLQ9NP71 852 aa12.98□□□□□ -0.33
CTDSP1-208ENST00000482272 CHRAC1Q9NRG0 131 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms