RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 FUT8Q9BYC5 575 aa10.52□□□□□ -0.73
ATG4B-219ENST00000479941 POLR1BQ9H9Y6 1135 aa10.52□□□□□ -0.73
ATG4B-219ENST00000479941 OR6C2Q9NZP2 312 aa10.52□□□□□ -0.73
ATG4B-219ENST00000479941 TMEM9Q9P0T7 183 aa10.52□□□□□ -0.73
ATG4B-219ENST00000479941 TDRKHQ9Y2W6 561 aaKnown RBP10.52□□□□□ -0.73
ATG4B-219ENST00000479941 PCDHGA8Q9Y5G5 932 aa10.52□□□□□ -0.73
ATG4B-219ENST00000479941 NFS1Q9Y697 457 aa10.52□□□□□ -0.73
ATG4B-219ENST00000479941 FAM95CA0A1B0GW59 222 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 OR6C74A6NCV1 312 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 PLD2O14939 933 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 PSIP1O75475 530 aaKnown RBP10.51□□□□□ -0.73
ATG4B-219ENST00000479941 PIAS1O75925 651 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 CATP04040 527 aaKnown RBP10.51□□□□□ -0.73
ATG4B-219ENST00000479941 ANKRD34CP0C6C1 535 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 TPBGLP0DKB5 382 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 MCM3P25205 808 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 TNFRSF8P28908 595 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 CSTF2P33240 577 aaKnown RBP eCLIP10.51□□□□□ -0.73
ATG4B-219ENST00000479941 LSSP48449 732 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 RAB28P51157 221 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 GFERP55789 205 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 POU4F1Q01851 419 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 RTP5Q14D33 572 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 C3orf38Q5JPI3 329 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 IRGCQ6NXR0 463 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 PAQR3Q6TCH7 311 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 CYHR1Q6ZMK1 362 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 PRSS42Q7Z5A4 293 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 CPNE9Q8IYJ1 553 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 FBXO39Q8N4B4 442 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 PPM1NQ8N819 430 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 AGBL5Q8NDL9 886 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 RCBTB1Q8NDN9 531 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 GATA6Q92908 595 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 ELMO2Q96JJ3 720 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 CD180Q99467 661 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 RBBP8Q99708 897 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 RAB11FIP5Q9BXF6 653 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 ACSS3Q9H6R3 686 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 POPDC3Q9HBV1 291 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 SYTL2Q9HCH5 934 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 KLHL3Q9UH77 587 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 SLC39A10Q9ULF5 831 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 SATB2Q9UPW6 733 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 ICKQ9UPZ9 632 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 LOXL2Q9Y4K0 774 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 LAMA5O15230 3695 aa10.51□□□□□ -0.73
ATG4B-219ENST00000479941 DMXL2Q8TDJ6 3036 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 ANKRD11Q6UB99 2663 aaPredicted RBP10.5□□□□□ -0.73
ATG4B-219ENST00000479941 A8MU76 341 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 C2orf74A8MZ97 194 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 GFYI3L273 518 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 BTN3A3O00478 584 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 BTN3A1O00481 513 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 RASGRF2O14827 1237 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 ZBTB14O43829 449 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 RASSF9O75901 435 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 ACSL3O95573 720 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 MPOP05164 745 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 JMJD7P0C870 316 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 POLR2CP19387 275 aaPredicted RBP10.5□□□□□ -0.73
ATG4B-219ENST00000479941 SAT1P21673 171 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 PKLRP30613 574 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 MLLT3P42568 568 aaPredicted RBP10.5□□□□□ -0.73
ATG4B-219ENST00000479941 SLC12A2P55011 1212 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 IL2P60568 153 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 GABREP78334 506 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 GRB7Q14451 532 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 C16orf72Q14CZ0 275 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 SNAP47Q5SQN1 464 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 CACHD1Q5VU97 1274 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 IGF2-ASQ6U949 168 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 UNQ6494/PRO21346Q6UXR6 183 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 FAM92BQ6ZTR7 304 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 TRMT10CQ7L0Y3 403 aaKnown RBP10.5□□□□□ -0.73
ATG4B-219ENST00000479941 ADGRF3Q8IZF5 1079 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 CARFQ8N187 725 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 MYO1HQ8N1T3 1032 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 NKAPQ8N5F7 415 aaKnown RBP10.5□□□□□ -0.73
ATG4B-219ENST00000479941 FBXO15Q8NCQ5 510 aaPredicted RBP10.5□□□□□ -0.73
ATG4B-219ENST00000479941 EEF1AKMT1Q8WVE0 214 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 ASB11Q8WXH4 323 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 UBXN4Q92575 508 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 TSPAN17Q96FV3 270 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 OLFM1Q99784 485 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 MENTQ9BUN1 341 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 TMEM121BQ9BXQ6 578 aaPredicted RBP10.5□□□□□ -0.73
ATG4B-219ENST00000479941 ZNF768Q9H5H4 540 aaKnown RBP10.5□□□□□ -0.73
ATG4B-219ENST00000479941 XKR8Q9H6D3 395 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 ANKZF1Q9H8Y5 726 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 SPATA7Q9P0W8 599 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 SEMA5BQ9P283 1151 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 DKK4Q9UBT3 224 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 LNPEPQ9UIQ6 1025 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 TSR3Q9UJK0 312 aaKnown RBP10.5□□□□□ -0.73
ATG4B-219ENST00000479941 RUVBL2Q9Y230 463 aaKnown RBP10.5□□□□□ -0.73
ATG4B-219ENST00000479941 MTO1Q9Y2Z2 717 aaKnown RBP10.5□□□□□ -0.73
ATG4B-219ENST00000479941 AK5Q9Y6K8 562 aa10.5□□□□□ -0.73
ATG4B-219ENST00000479941 A0A087WUV0 522 aaPredicted RBP10.49□□□□□ -0.73
ATG4B-219ENST00000479941 A0A1W2PNU3 283 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms