RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 OR56A5P0C7T3 313 aa13.89□□□□□ -0.19
ATG4B-218ENST00000479554 MSL3P1P0C860 447 aa13.89□□□□□ -0.19
ATG4B-218ENST00000479554 CYP2A7P20853 494 aa13.89□□□□□ -0.19
ATG4B-218ENST00000479554 ABRQ12979 859 aa13.89□□□□□ -0.19
ATG4B-218ENST00000479554 BRD3Q15059 726 aa13.89□□□□□ -0.19
ATG4B-218ENST00000479554 TSTD2Q5T7W7 516 aa13.89□□□□□ -0.19
ATG4B-218ENST00000479554 LYPLAL1Q5VWZ2 237 aa13.89□□□□□ -0.19
ATG4B-218ENST00000479554 IZUMO3Q5VZ72 239 aa13.89□□□□□ -0.19
ATG4B-218ENST00000479554 HOOK3Q86VS8 718 aa13.89□□□□□ -0.19
ATG4B-218ENST00000479554 SLC13A5Q86YT5 568 aaPredicted RBP13.89□□□□□ -0.19
ATG4B-218ENST00000479554 ADGRF3Q8IZF5 1079 aa13.89□□□□□ -0.19
ATG4B-218ENST00000479554 SLC38A9Q8NBW4 561 aa13.89□□□□□ -0.19
ATG4B-218ENST00000479554 NOA1Q8NC60 698 aaKnown RBP13.89□□□□□ -0.19
ATG4B-218ENST00000479554 OR5AR1Q8NGP9 310 aa13.89□□□□□ -0.19
ATG4B-218ENST00000479554 OR13J1Q8NGT2 312 aa13.89□□□□□ -0.19
ATG4B-218ENST00000479554 C1orf54Q8WWF1 131 aa13.89□□□□□ -0.19
ATG4B-218ENST00000479554 CLIP3Q96DZ5 547 aa13.89□□□□□ -0.19
ATG4B-218ENST00000479554 LRFN5Q96NI6 719 aa13.89□□□□□ -0.19
ATG4B-218ENST00000479554 TRAPPC9Q96Q05 1148 aa13.89□□□□□ -0.19
ATG4B-218ENST00000479554 RANBP9Q96S59 729 aa13.89□□□□□ -0.19
ATG4B-218ENST00000479554 NAP1L3Q99457 506 aaPredicted RBP13.89□□□□□ -0.19
ATG4B-218ENST00000479554 TTC1Q99614 292 aa13.89□□□□□ -0.19
ATG4B-218ENST00000479554 KLHL25Q9H0H3 589 aa13.89□□□□□ -0.19
ATG4B-218ENST00000479554 CHST8Q9H2A9 424 aa13.89□□□□□ -0.19
ATG4B-218ENST00000479554 RAB6BQ9NRW1 208 aa13.89□□□□□ -0.19
ATG4B-218ENST00000479554 ACTR10Q9NZ32 417 aa13.89□□□□□ -0.19
ATG4B-218ENST00000479554 ICKQ9UPZ9 632 aa13.89□□□□□ -0.19
ATG4B-218ENST00000479554 FARSAQ9Y285 508 aaKnown RBP13.89□□□□□ -0.19
ATG4B-218ENST00000479554 ASF1AQ9Y294 204 aa13.89□□□□□ -0.19
ATG4B-218ENST00000479554 COL12A1Q99715 3063 aa13.89□□□□□ -0.19
ATG4B-218ENST00000479554 F8W8V4 182 aa13.88□□□□□ -0.19
ATG4B-218ENST00000479554 MEN1O00255 615 aa13.88□□□□□ -0.19
ATG4B-218ENST00000479554 GOT2P00505 430 aaKnown RBP13.88□□□□□ -0.19
ATG4B-218ENST00000479554 PVRP15151 417 aa13.88□□□□□ -0.19
ATG4B-218ENST00000479554 NR1D1P20393 614 aa13.88□□□□□ -0.19
ATG4B-218ENST00000479554 ADRA1DP25100 572 aa13.88□□□□□ -0.19
ATG4B-218ENST00000479554 SHMT2P34897 504 aa13.88□□□□□ -0.19
ATG4B-218ENST00000479554 C2orf54Q08AI8 447 aa13.88□□□□□ -0.19
ATG4B-218ENST00000479554 KLRB1Q12918 225 aa13.88□□□□□ -0.19
ATG4B-218ENST00000479554 SEMA5AQ13591 1074 aa13.88□□□□□ -0.19
ATG4B-218ENST00000479554 SNX1Q13596 522 aa13.88□□□□□ -0.19
ATG4B-218ENST00000479554 IL10RAQ13651 578 aa13.88□□□□□ -0.19
ATG4B-218ENST00000479554 PRAMEF17Q5VTA0 474 aa13.88□□□□□ -0.19
ATG4B-218ENST00000479554 TCTN3Q6NUS6 607 aa13.88□□□□□ -0.19
ATG4B-218ENST00000479554 SPESP1Q6UW49 350 aa13.88□□□□□ -0.19
ATG4B-218ENST00000479554 APLFQ8IW19 511 aaPredicted RBP13.88□□□□□ -0.19
ATG4B-218ENST00000479554 DSELQ8IZU8 1212 aa13.88□□□□□ -0.19
ATG4B-218ENST00000479554 CCDC89Q8N998 374 aa13.88□□□□□ -0.19
ATG4B-218ENST00000479554 OR1L3Q8NH93 324 aa13.88□□□□□ -0.19
ATG4B-218ENST00000479554 THAP4Q8WY91 577 aa13.88□□□□□ -0.19
ATG4B-218ENST00000479554 HDAC10Q969S8 669 aa13.88□□□□□ -0.19
ATG4B-218ENST00000479554 SLC7A5P2Q9GIP4 190 aa13.88□□□□□ -0.19
ATG4B-218ENST00000479554 ACTR5Q9H9F9 607 aaPredicted RBP13.88□□□□□ -0.19
ATG4B-218ENST00000479554 PAK5Q9P286 719 aa13.88□□□□□ -0.19
ATG4B-218ENST00000479554 SLC2A6Q9UGQ3 507 aa13.88□□□□□ -0.19
ATG4B-218ENST00000479554 POLG2Q9UHN1 485 aa13.88□□□□□ -0.19
ATG4B-218ENST00000479554 TLK1Q9UKI8 766 aa13.88□□□□□ -0.19
ATG4B-218ENST00000479554 RIMKLBQ9ULI2 386 aa13.88□□□□□ -0.19
ATG4B-218ENST00000479554 SLC5A10A0PJK1 596 aa13.87□□□□□ -0.19
ATG4B-218ENST00000479554 E7EQ34 232 aa13.87□□□□□ -0.19
ATG4B-218ENST00000479554 CCDC188H7C350 402 aa13.87□□□□□ -0.19
ATG4B-218ENST00000479554 OR1I1O60431 355 aa13.87□□□□□ -0.19
ATG4B-218ENST00000479554 APRTP07741 180 aa13.87□□□□□ -0.19
ATG4B-218ENST00000479554 ETS1P14921 441 aa13.87□□□□□ -0.19
ATG4B-218ENST00000479554 ACADLP28330 430 aa13.87□□□□□ -0.19
ATG4B-218ENST00000479554 RORAP35398 523 aa13.87□□□□□ -0.19
ATG4B-218ENST00000479554 GRIA1P42261 906 aa13.87□□□□□ -0.19
ATG4B-218ENST00000479554 PRAMEP78395 509 aa13.87□□□□□ -0.19
ATG4B-218ENST00000479554 PLOD1Q02809 727 aaPredicted RBP13.87□□□□□ -0.19
ATG4B-218ENST00000479554 ZNF789Q5FWF6 425 aa13.87□□□□□ -0.19
ATG4B-218ENST00000479554 PLEKHS1Q5SXH7 462 aa13.87□□□□□ -0.19
ATG4B-218ENST00000479554 NAPRTQ6XQN6 538 aa13.87□□□□□ -0.19
ATG4B-218ENST00000479554 ZNF517Q6ZMY9 492 aaPredicted RBP13.87□□□□□ -0.19
ATG4B-218ENST00000479554 ASB18Q6ZVZ8 466 aa13.87□□□□□ -0.19
ATG4B-218ENST00000479554 NLRP9Q7RTR0 991 aa13.87□□□□□ -0.19
ATG4B-218ENST00000479554 PRUNE1Q86TP1 453 aa13.87□□□□□ -0.19
ATG4B-218ENST00000479554 TBC1D21Q8IYX1 336 aa13.87□□□□□ -0.19
ATG4B-218ENST00000479554 ENDOVQ8N8Q3 282 aaKnown RBP13.87□□□□□ -0.19
ATG4B-218ENST00000479554 C19orf47Q8N9M1 422 aaKnown RBP13.87□□□□□ -0.19
ATG4B-218ENST00000479554 PPHLN1Q8NEY8 458 aaKnown RBP13.87□□□□□ -0.19
ATG4B-218ENST00000479554 OR6P1Q8NGX9 317 aa13.87□□□□□ -0.19
ATG4B-218ENST00000479554 OR4L1Q8NH43 312 aa13.87□□□□□ -0.19
ATG4B-218ENST00000479554 OR5K2Q8NHB8 316 aa13.87□□□□□ -0.19
ATG4B-218ENST00000479554 N4BP2L2Q92802 583 aaPredicted RBP13.87□□□□□ -0.19
ATG4B-218ENST00000479554 CASS4Q9NQ75 786 aa13.87□□□□□ -0.19
ATG4B-218ENST00000479554 PCMTD2Q9NV79 361 aa13.87□□□□□ -0.19
ATG4B-218ENST00000479554 ARGLU1Q9NWB6 273 aaPredicted RBP13.87□□□□□ -0.19
ATG4B-218ENST00000479554 SERTAD3Q9UJW9 196 aa13.87□□□□□ -0.19
ATG4B-218ENST00000479554 TDRKHQ9Y2W6 561 aaKnown RBP13.87□□□□□ -0.19
ATG4B-218ENST00000479554 TCAF1Q9Y4C2 921 aa13.87□□□□□ -0.19
ATG4B-218ENST00000479554 PIKFYVEQ9Y2I7 2098 aa13.87□□□□□ -0.19
ATG4B-218ENST00000479554 FLNCQ14315 2725 aa13.87□□□□□ -0.19
ATG4B-218ENST00000479554 K7EM74 188 aa13.86□□□□□ -0.19
ATG4B-218ENST00000479554 KDM1AO60341 852 aa13.86□□□□□ -0.19
ATG4B-218ENST00000479554 DNAJB5O75953 348 aa13.86□□□□□ -0.19
ATG4B-218ENST00000479554 CHRM5P08912 532 aaPredicted RBP13.86□□□□□ -0.19
ATG4B-218ENST00000479554 RAB40ALP0C0E4 278 aa13.86□□□□□ -0.19
ATG4B-218ENST00000479554 RHOXF2BP0C7M4 288 aa13.86□□□□□ -0.19
ATG4B-218ENST00000479554 UGT2B7P16662 529 aa13.86□□□□□ -0.19
ATG4B-218ENST00000479554 MCM3P25205 808 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms