RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 PRR7Q8TB68 274 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 MIPOL1Q8TD10 442 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 STAMBPL1Q96FJ0 436 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 DCUN1D1Q96GG9 259 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 ZDHHC12Q96GR4 267 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 ZNF514Q96K75 400 aaPredicted RBP6.5□□□□□ -1.37
VCP-205ENST00000479300 C9orf72Q96LT7 481 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 QKIQ96PU8 341 aaKnown RBP eCLIP6.5□□□□□ -1.37
VCP-205ENST00000479300 VPS35Q96QK1 796 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 OR6C1Q96RD1 312 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 FCRL5Q96RD9 977 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 TRIB3Q96RU7 358 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 TSC22D3Q99576 134 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 HEMGNQ9BXL5 484 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 ACTL8Q9H568 366 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 RABEP2Q9H5N1 569 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 TMBIM4Q9HC24 238 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 ZFATQ9P243 1243 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 SAE1Q9UBE0 346 aaPredicted RBP6.5□□□□□ -1.37
VCP-205ENST00000479300 GUCA1BQ9UMX6 200 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 SNX12Q9UMY4 172 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 SLC12A4Q9UP95 1085 aa6.5□□□□□ -1.37
VCP-205ENST00000479300 REXO2Q9Y3B8 237 aaKnown RBP6.5□□□□□ -1.37
VCP-205ENST00000479300 TACC2O95359 2948 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 LOC285095A0A1B0GVY8 99 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 CCT8L1PA6NM43 557 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 KCNN4O15554 427 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 PSMD3O43242 534 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 SPAG6O75602 509 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 CEACAM4O75871 244 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 UBXN7O94888 489 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 ANP32DO95626 131 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 DDAH2O95865 285 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 GAS8O95995 478 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 LINGO3P0C6S8 592 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 PYGMP11217 842 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 FGF5P12034 268 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 TYRP1P17643 537 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 LPOP22079 712 aaPredicted RBP6.49□□□□□ -1.37
VCP-205ENST00000479300 RBL1P28749 1068 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 PGDP52209 483 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 MRPS35P82673 323 aaKnown RBP6.49□□□□□ -1.37
VCP-205ENST00000479300 KIF5AQ12840 1032 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 CUL3Q13618 768 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 PLCL1Q15111 1095 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 SLC1A5Q15758 541 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 TAZQ16635 292 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 ZNF648Q5T619 568 aaPredicted RBP6.49□□□□□ -1.37
VCP-205ENST00000479300 JMJD6Q6NYC1 403 aaPredicted RBP6.49□□□□□ -1.37
VCP-205ENST00000479300 C8orf74Q6P047 294 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 FAM151BQ6UXP7 276 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 CERS6Q6ZMG9 384 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 TMEM26Q6ZUK4 368 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 PEX26Q7Z412 305 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 LAPTM4BQ86VI4 370 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 AMZ2Q86W34 360 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 CREG2Q8IUH2 290 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 ZNF567Q8N184 647 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 BEND7Q8N7W2 519 aaPredicted RBP6.49□□□□□ -1.37
VCP-205ENST00000479300 RBMXL3Q8N7X1 1067 aaKnown RBP6.49□□□□□ -1.37
VCP-205ENST00000479300 CCDC197Q8NCU1 140 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 SPATA4Q8NEY3 305 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 CFAP61Q8NHU2 1237 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 B4GALNT2Q8NHY0 566 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 FAM81AQ8TBF8 368 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 RSC1A1Q92681 617 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 TADA1Q96BN2 335 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 ULK4Q96C45 1275 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 CAPZA3Q96KX2 299 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 ZNF570Q96NI8 536 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 TGM7Q96PF1 710 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 RANBP9Q96S59 729 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 FICDQ9BVA6 458 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 OSBPL8Q9BZF1 889 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 GBA3Q9H227 469 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 CNOT10Q9H9A5 744 aaKnown RBP6.49□□□□□ -1.37
VCP-205ENST00000479300 UCK1Q9HA47 277 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 LHX9Q9NQ69 397 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 PAPOLBQ9NRJ5 636 aaKnown RBP6.49□□□□□ -1.37
VCP-205ENST00000479300 POT1Q9NUX5 634 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 ZNF624Q9P2J8 865 aaPredicted RBP6.49□□□□□ -1.37
VCP-205ENST00000479300 TRIM10Q9UDY6 481 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 SLC23A2Q9UGH3 650 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 BAIAP2L1Q9UHR4 511 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 LNPEPQ9UIQ6 1025 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 CRLS1Q9UJA2 301 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 AMFRQ9UKV5 643 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 EFR3BQ9Y2G0 817 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 PCDHB3Q9Y5E6 796 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 PCDHGA9Q9Y5G4 932 aaKnown RBP6.49□□□□□ -1.37
VCP-205ENST00000479300 PCDHA3Q9Y5H8 950 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 SPO11Q9Y5K1 396 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 DNMT3AQ9Y6K1 912 aaPredicted RBP6.49□□□□□ -1.37
VCP-205ENST00000479300 AKAP9Q99996 3911 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 DCHS2Q6V1P9 2916 aa6.49□□□□□ -1.37
VCP-205ENST00000479300 GRID2IPA4D2P6 1211 aa6.48□□□□□ -1.37
VCP-205ENST00000479300 ARGFXA6NJG6 315 aa6.48□□□□□ -1.37
VCP-205ENST00000479300 MIF4GDA9UHW6 222 aaKnown RBP6.48□□□□□ -1.37
VCP-205ENST00000479300 F8W8V4 182 aa6.48□□□□□ -1.37
VCP-205ENST00000479300 TOX3O15405 576 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms