RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, humanhuman

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-208ENST00000478188 SEPT6Q14141 434 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 FRG1Q14331 258 aaKnown RBP4.11□□□□□ -1.75
POLR2B-208ENST00000478188 TGIF1Q15583 401 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 TRIP13Q15645 432 aaPredicted RBP4.11□□□□□ -1.75
POLR2B-208ENST00000478188 ZIC1Q15915 447 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 KYNUQ16719 465 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 LYPLAL1Q5VWZ2 237 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 CARFQ8N187 725 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 ARHGEF39Q8N4T4 335 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 LINC01555Q8NAE3 123 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 OR10G6Q8NH81 332 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 HNRNPLLQ8WVV9 542 aaKnown RBP4.11□□□□□ -1.75
POLR2B-208ENST00000478188 EDARADDQ8WWZ3 215 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 TAAR9Q96RI9 348 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 SLC38A3Q99624 504 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 FERMT1Q9BQL6 677 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 STRADBQ9C0K7 418 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 DDX47Q9H0S4 455 aaKnown RBP4.11□□□□□ -1.75
POLR2B-208ENST00000478188 THSD1Q9NS62 852 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 TRMT1Q9NXH9 659 aaKnown RBP4.11□□□□□ -1.75
POLR2B-208ENST00000478188 PISDQ9UG56 409 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 CFAP20Q9Y6A4 193 aaKnown RBP4.11□□□□□ -1.75
POLR2B-208ENST00000478188 AK5Q9Y6K8 562 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 ZFYVE26Q68DK2 2539 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 EFCAB7A8K855 629 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 IQCF5A8MTL0 148 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 LIN7AO14910 233 aaPredicted RBP4.11□□□□□ -1.75
POLR2B-208ENST00000478188 BANF1O75531 89 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 CTSBP07858 339 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 THBS1P07996 1170 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 ITGAXP20702 1163 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 OGNP20774 298 aaKnown RBP4.11□□□□□ -1.75
POLR2B-208ENST00000478188 PBLDP30039 288 aaPredicted RBP4.11□□□□□ -1.75
POLR2B-208ENST00000478188 ATP5DP30049 168 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 AKT1P31749 480 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 RORAP35398 523 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 ABCG1P45844 678 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 GPS1Q13098 491 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 SKIDA1Q1XH10 827 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 ANKRD20A4Q4UJ75 823 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 ZRANB3Q5FWF4 1079 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 ANKS6Q68DC2 871 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 FIGNL1Q6PIW4 674 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 CES3Q6UWW8 571 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 NAPRTQ6XQN6 538 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 PPP1R21Q6ZMI0 780 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 GALNT7Q86SF2 657 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 HOOK3Q86VS8 718 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 CILP2Q8IUL8 1156 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 LRRC56Q8IYG6 542 aaPredicted RBP4.11□□□□□ -1.75
POLR2B-208ENST00000478188 UNC5BQ8IZJ1 945 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 CCDC89Q8N998 374 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 PPHLN1Q8NEY8 458 aaKnown RBP4.11□□□□□ -1.75
POLR2B-208ENST00000478188 OR52E1Q8NGJ3 308 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 OR5AR1Q8NGP9 310 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 OR5K2Q8NHB8 316 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 KCNE4Q8WWG9 221 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 ZNF501Q96CX3 271 aaPredicted RBP4.11□□□□□ -1.75
POLR2B-208ENST00000478188 C12orf66Q96MD2 445 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 ZNF285Q96NJ3 590 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 OR2A14Q96R47 310 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 CD180Q99467 661 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 PHACTR1Q9C0D0 580 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 OSGEPL1Q9H4B0 414 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 CPNE5Q9HCH3 593 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 CATSPERZQ9NTU4 200 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 GRHL1Q9NZI5 618 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 IL1RAPL1Q9NZN1 696 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 MDC1Q14676 2089 aaKnown RBP4.11□□□□□ -1.75
POLR2B-208ENST00000478188 HEATR5BQ9P2D3 2071 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 CCDC88CQ9P219 2028 aa4.11□□□□□ -1.75
POLR2B-208ENST00000478188 A0A1W2PNR3 127 aa4.1□□□□□ -1.75
POLR2B-208ENST00000478188 TLCD2A6NGC4 264 aa4.1□□□□□ -1.75
POLR2B-208ENST00000478188 CD3EAPO15446 510 aaKnown RBP4.1□□□□□ -1.75
POLR2B-208ENST00000478188 USP1O94782 785 aa4.1□□□□□ -1.75
POLR2B-208ENST00000478188 MATN4O95460 622 aa4.1□□□□□ -1.75
POLR2B-208ENST00000478188 VIPP01282 170 aa4.1□□□□□ -1.75
POLR2B-208ENST00000478188 FOLR1P15328 257 aa4.1□□□□□ -1.75
POLR2B-208ENST00000478188 TYRP1P17643 537 aa4.1□□□□□ -1.75
POLR2B-208ENST00000478188 TCP1P17987 556 aaKnown RBP4.1□□□□□ -1.75
POLR2B-208ENST00000478188 F8A1P23610 371 aa4.1□□□□□ -1.75
POLR2B-208ENST00000478188 CSRP3P50461 194 aa4.1□□□□□ -1.75
POLR2B-208ENST00000478188 SESN2P58004 480 aaPredicted RBP4.1□□□□□ -1.75
POLR2B-208ENST00000478188 BASP1P80723 227 aaKnown RBP4.1□□□□□ -1.75
POLR2B-208ENST00000478188 ABRQ12979 859 aa4.1□□□□□ -1.75
POLR2B-208ENST00000478188 CCSMST1Q4G0I0 132 aa4.1□□□□□ -1.75
POLR2B-208ENST00000478188 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.1□□□□□ -1.75
POLR2B-208ENST00000478188 PHF19Q5T6S3 580 aa4.1□□□□□ -1.75
POLR2B-208ENST00000478188 KMT5CQ86Y97 462 aa4.1□□□□□ -1.75
POLR2B-208ENST00000478188 CFAP206Q8IYR0 622 aa4.1□□□□□ -1.75
POLR2B-208ENST00000478188 ALDH16A1Q8IZ83 802 aa4.1□□□□□ -1.75
POLR2B-208ENST00000478188 KRT222Q8N1A0 295 aa4.1□□□□□ -1.75
POLR2B-208ENST00000478188 AGBL5Q8NDL9 886 aa4.1□□□□□ -1.75
POLR2B-208ENST00000478188 ACVR1CQ8NER5 493 aa4.1□□□□□ -1.75
POLR2B-208ENST00000478188 HMGCLL1Q8TB92 370 aa4.1□□□□□ -1.75
POLR2B-208ENST00000478188 MAGOHBQ96A72 148 aaKnown RBP4.1□□□□□ -1.75
POLR2B-208ENST00000478188 PWWP2AQ96N64 755 aa4.1□□□□□ -1.75
POLR2B-208ENST00000478188 MAP3K3Q99759 626 aa4.1□□□□□ -1.75
POLR2B-208ENST00000478188 CMKLR1Q99788 373 aa4.1□□□□□ -1.75
POLR2B-208ENST00000478188 MVB12BQ9H7P6 319 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms