RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 TTC9BQ8N6N2 239 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 PACRGLQ8N7B6 248 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 ANKFN1Q8N957 763 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 OR7D4Q8NG98 312 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 OR52K2Q8NGK3 314 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 OR13C4Q8NGS5 318 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 OR2T34Q8NGX1 318 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 OR2T3Q8NH03 318 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 NAT14Q8WUY8 206 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 ATP6V1E2Q96A05 226 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 EME1Q96AY2 570 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 RMDN1Q96DB5 314 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 ZNF597Q96LX8 424 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 TM9SF2Q99805 663 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 CCT7Q99832 543 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 GPATCH1Q9BRR8 931 aaKnown RBP4.87□□□□□ -1.63
SF3B6-202ENST00000478050 HAUS8Q9BT25 410 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 OSBPL11Q9BXB4 747 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 TDRD1Q9BXT4 1180 aaKnown RBP4.87□□□□□ -1.63
SF3B6-202ENST00000478050 MRPL9Q9BYD2 267 aaKnown RBP4.87□□□□□ -1.63
SF3B6-202ENST00000478050 SEZ6LQ9BYH1 1024 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 SLC2A11Q9BYW1 496 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 GPR62Q9BZJ7 368 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 CWH43Q9H720 699 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 SLC28A3Q9HAS3 691 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 ARMC1Q9NVT9 282 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 MARCH5Q9NX47 278 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 ABCD2Q9UBJ2 740 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 KLHL3Q9UH77 587 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 ZMYM5Q9UJ78 669 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 TRMT6Q9UJA5 497 aaKnown RBP4.87□□□□□ -1.63
SF3B6-202ENST00000478050 PCDHB10Q9UN67 800 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 ATP11BQ9Y2G3 1177 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 ZFP37Q9Y6Q3 630 aaPredicted RBP4.87□□□□□ -1.63
SF3B6-202ENST00000478050 PLXNB3Q9ULL4 1909 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 C5orf42Q9H799 3197 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 PRRC2BQ5JSZ5 2229 aaKnown RBP4.87□□□□□ -1.63
SF3B6-202ENST00000478050 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.86□□□□□ -1.63
SF3B6-202ENST00000478050 ATP6AP2A0A1C7CYW4 349 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 KANSL1LA0AUZ9 987 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 PRR23AA6NEV1 266 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 ZNF839A8K0R7 811 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 UPK3BL1B0FP48 263 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 UPK3BL2E5RIL1 263 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 PROB1E7EW31 1015 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 H3BMM5 538 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 H3BNC9 293 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 H7C0S8 307 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 STX7O15400 261 aaKnown RBP4.86□□□□□ -1.63
SF3B6-202ENST00000478050 HNRNPRO43390 633 aaKnown RBP4.86□□□□□ -1.63
SF3B6-202ENST00000478050 SNX2O60749 519 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 ECI2O75521 394 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 ATP6AP2O75787 350 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 SIX3O95343 332 aaPredicted RBP4.86□□□□□ -1.63
SF3B6-202ENST00000478050 ESRRBO95718 433 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 LATS1O95835 1130 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 CLPTM1O96005 669 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 GPIP06744 558 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 ADRB1P08588 477 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 PRR35P0CG20 571 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 UROSP10746 265 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 FCGR1AP12314 374 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 ZNF26P17031 533 aaPredicted RBP4.86□□□□□ -1.63
SF3B6-202ENST00000478050 ATF6P18850 670 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 TSPAN8P19075 237 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 HDCP19113 662 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 IL10P22301 178 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 FMO4P31512 558 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 SLC6A4P31645 630 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 MC4RP32245 332 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 GRIA2P42262 883 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 SLC11A1P49279 550 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 CDH13P55290 713 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 EEFSECP57772 596 aaKnown RBP4.86□□□□□ -1.63
SF3B6-202ENST00000478050 KCNK10P57789 538 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 MYBPC1Q00872 1141 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 TCF15Q12870 199 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 RALGDSQ12967 914 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 DUSP4Q13115 394 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 ZNF177Q13360 481 aaPredicted RBP4.86□□□□□ -1.63
SF3B6-202ENST00000478050 BFSP2Q13515 415 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 APOFQ13790 326 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 GRB7Q14451 532 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 PTPRCAPQ14761 206 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 RBBP5Q15291 538 aaKnown RBP4.86□□□□□ -1.63
SF3B6-202ENST00000478050 CYTH1Q15438 398 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 PDCD4Q53EL6 469 aaKnown RBP4.86□□□□□ -1.63
SF3B6-202ENST00000478050 XKR7Q5GH72 579 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 C6orf10Q5SRN2 563 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 HECTD3Q5T447 861 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 THEMIS2Q5TEJ8 643 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 LCN8Q6JVE9 175 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 PPP4R4Q6NUP7 873 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 LETMD1Q6P1Q0 360 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 BORAQ6PGQ7 559 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 PAQR3Q6TCH7 311 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 LAYNQ6UX15 382 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 ASCL5Q7RTU5 278 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 GALNT13Q8IUC8 556 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 CHERPQ8IWX8 916 aaKnown RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms