RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 UCHL3P15374 230 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 ZNF37AP17032 561 aaPredicted RBP4.54□□□□□ -1.68
CKS1B-207ENST00000477676 LHCGRP22888 699 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 MMP8P22894 467 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 PPP1R2P41236 205 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 KIR2DL3P43628 341 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 KLK7P49862 253 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 GEMIN4P57678 1058 aaKnown RBP4.54□□□□□ -1.68
CKS1B-207ENST00000477676 RPL7AP62424 266 aaKnown RBP4.54□□□□□ -1.68
CKS1B-207ENST00000477676 OGDHQ02218 1023 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 ELP6Q0PNE2 266 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 SQSTM1Q13501 440 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 RAPGEF1Q13905 1077 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 ARHGEF7Q14155 803 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 CNGA3Q16281 694 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 CA9Q16790 459 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 ERCC6LQ2NKX8 1250 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 DEFB109BQ30KR1 87 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 MAP9Q49MG5 647 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 ANKS6Q68DC2 871 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 SLC30A9Q6PML9 568 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 CYP4V2Q6ZWL3 525 aaPredicted RBP4.54□□□□□ -1.68
CKS1B-207ENST00000477676 DPPA4Q7L190 304 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 STRADAQ7RTN6 431 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 ARHGAP22Q7Z5H3 698 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 HSD11B1LQ7Z5J1 315 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 MRGPREQ86SM8 312 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 SRLQ86TD4 932 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 TMEM135Q86UB9 458 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 TSPAN33Q86UF1 283 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 PIM3Q86V86 326 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 HEATR4Q86WZ0 1026 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 DNAAF5Q86Y56 855 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 CREBRFQ8IUR6 639 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 PHYKPLQ8IUZ5 450 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 CACNA2D3Q8IZS8 1091 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 BCL6BQ8N143 479 aaPredicted RBP4.54□□□□□ -1.68
CKS1B-207ENST00000477676 UMODL1-AS1Q8N2C9 162 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 PGBD5Q8N414 524 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 ARFGAP1Q8N6T3 406 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 NPWQ8N729 165 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 GLB1L3Q8NCI6 653 aaPredicted RBP4.54□□□□□ -1.68
CKS1B-207ENST00000477676 FAM172AQ8WUF8 416 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 NTAN1Q96AB6 310 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 FOXRED1Q96CU9 486 aaPredicted RBP4.54□□□□□ -1.68
CKS1B-207ENST00000477676 RTP4Q96DX8 246 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 CELF6Q96J87 481 aaKnown RBP4.54□□□□□ -1.68
CKS1B-207ENST00000477676 FAM81BQ96LP2 452 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 CTRCQ99895 268 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 C11orf70Q9BRQ4 267 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 C1QTNF7Q9BXJ2 289 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 TEX101Q9BY14 249 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 SLC39A8Q9C0K1 460 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 GANQ9H2C0 597 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 RETREG1Q9H6L5 497 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 SLC39A1Q9NY26 324 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 SAMD15Q9P1V8 674 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 B4GALT6Q9UBX8 382 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 RWDD2AQ9UIY3 292 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 TUBD1Q9UJT1 453 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 ANAPC2Q9UJX6 822 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 FZD10Q9ULW2 581 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 SUFUQ9UMX1 484 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 TP53TG5Q9Y2B4 290 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 PAXBP1Q9Y5B6 917 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 PCM1Q15154 2024 aa4.54□□□□□ -1.68
CKS1B-207ENST00000477676 CFAP69A5D8W1 941 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 EFCAB7A8K855 629 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 ZNF891A8MT65 544 aaPredicted RBP4.53□□□□□ -1.68
CKS1B-207ENST00000477676 B4E171 279 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 CACNB4O00305 520 aaPredicted RBP4.53□□□□□ -1.68
CKS1B-207ENST00000477676 HTRA2O43464 458 aaPredicted RBP4.53□□□□□ -1.68
CKS1B-207ENST00000477676 GFPT2O94808 682 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 KRT7P08729 469 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 ELFN1P0C7U0 828 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 MYCLP1P12525 358 aaPredicted RBP4.53□□□□□ -1.68
CKS1B-207ENST00000477676 HTR1BP28222 390 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 EPHB2P29323 1055 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 SDC4P31431 198 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 TSPAN7P41732 249 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 STAT1P42224 750 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 GPR3P46089 330 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 CCR10P46092 362 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 MTIF2P46199 727 aaKnown RBP4.53□□□□□ -1.68
CKS1B-207ENST00000477676 GNPDA1P46926 289 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 AVPR1BP47901 424 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 CSNK1DP48730 415 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 PAPOLAP51003 745 aaKnown RBP4.53□□□□□ -1.68
CKS1B-207ENST00000477676 SUOXP51687 545 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 GSCP56915 257 aaPredicted RBP4.53□□□□□ -1.68
CKS1B-207ENST00000477676 SNX16P57768 344 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 YBEYP58557 167 aaPredicted RBP4.53□□□□□ -1.68
CKS1B-207ENST00000477676 MXRA7P84157 204 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 CDK3Q00526 305 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 MC2RQ01718 297 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 RAD51Q06609 339 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 ADCY2Q08462 1091 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 CDC20Q12834 499 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 TRA2AQ13595 282 aaKnown RBP eCLIP4.53□□□□□ -1.68
CKS1B-207ENST00000477676 PARP15Q460N3 678 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms