RNA–Protein interactions for RNA: ENST00000477639.5

TMED4-204, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2

Gene TMED4, Length 1,950 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-204ENST00000477639 LEMD2Q8NC56 503 aa20.2■□□□□ 0.82
TMED4-204ENST00000477639 ZNF548Q8NEK5 533 aaPredicted RBP20.2■□□□□ 0.82
TMED4-204ENST00000477639 ECHDC3Q96DC8 303 aa20.2■□□□□ 0.82
TMED4-204ENST00000477639 IKZF5Q9H5V7 419 aa20.2■□□□□ 0.82
TMED4-204ENST00000477639 SOX17Q9H6I2 414 aaPredicted RBP20.2■□□□□ 0.82
TMED4-204ENST00000477639 SLC25A37Q9NYZ2 338 aa20.2■□□□□ 0.82
TMED4-204ENST00000477639 SPG21Q9NZD8 308 aa20.2■□□□□ 0.82
TMED4-204ENST00000477639 SH3BP1Q9Y3L3 701 aa20.2■□□□□ 0.82
TMED4-204ENST00000477639 LTBP2Q14767 1821 aa20.2■□□□□ 0.82
TMED4-204ENST00000477639 H0YAE9 185 aa20.19■□□□□ 0.82
TMED4-204ENST00000477639 TEX28O15482 410 aa20.19■□□□□ 0.82
TMED4-204ENST00000477639 ARHGEF15O94989 841 aa20.19■□□□□ 0.82
TMED4-204ENST00000477639 CCR7P32248 378 aa20.19■□□□□ 0.82
TMED4-204ENST00000477639 STK19P49842 368 aaPredicted RBP20.19■□□□□ 0.82
TMED4-204ENST00000477639 PTSQ03393 145 aa20.19■□□□□ 0.82
TMED4-204ENST00000477639 CYP4F3Q08477 520 aa20.19■□□□□ 0.82
TMED4-204ENST00000477639 IMPG1Q17R60 797 aa20.19■□□□□ 0.82
TMED4-204ENST00000477639 ZBED5Q49AG3 693 aa20.19■□□□□ 0.82
TMED4-204ENST00000477639 FAM98BQ52LJ0 330 aaKnown RBP20.19■□□□□ 0.82
TMED4-204ENST00000477639 USP39Q53GS9 565 aaKnown RBP20.19■□□□□ 0.82
TMED4-204ENST00000477639 RUNDC3AQ59EK9 446 aa20.19■□□□□ 0.82
TMED4-204ENST00000477639 LRRC66Q68CR7 880 aa20.19■□□□□ 0.82
TMED4-204ENST00000477639 HS6ST3Q8IZP7 471 aa20.19■□□□□ 0.82
TMED4-204ENST00000477639 KRTCAP2Q8N6L1 136 aa20.19■□□□□ 0.82
TMED4-204ENST00000477639 OR2T12Q8NG77 320 aa20.19■□□□□ 0.82
TMED4-204ENST00000477639 MRPS31Q92665 395 aaKnown RBP20.19■□□□□ 0.82
TMED4-204ENST00000477639 GDF15Q99988 308 aa20.19■□□□□ 0.82
TMED4-204ENST00000477639 OCEL1Q9H607 264 aa20.19■□□□□ 0.82
TMED4-204ENST00000477639 ZFP14Q9HCL3 533 aa20.19■□□□□ 0.82
TMED4-204ENST00000477639 NRG2O14511 850 aaPredicted RBP20.19■□□□□ 0.82
TMED4-204ENST00000477639 DEAF1O75398 565 aaPredicted RBP20.19■□□□□ 0.82
TMED4-204ENST00000477639 PGRP06401 933 aa20.19■□□□□ 0.82
TMED4-204ENST00000477639 CKMP06732 381 aa20.19■□□□□ 0.82
TMED4-204ENST00000477639 ANXA5P08758 320 aa20.19■□□□□ 0.82
TMED4-204ENST00000477639 NFKBIAP25963 317 aa20.19■□□□□ 0.82
TMED4-204ENST00000477639 GGT5P36269 586 aa20.19■□□□□ 0.82
TMED4-204ENST00000477639 SNRPD1P62314 119 aaKnown RBP20.19■□□□□ 0.82
TMED4-204ENST00000477639 ARHGEF7Q14155 803 aa20.19■□□□□ 0.82
TMED4-204ENST00000477639 TMEM214Q6NUQ4 689 aaKnown RBP20.19■□□□□ 0.82
TMED4-204ENST00000477639 TTC23LQ6PF05 361 aa20.19■□□□□ 0.82
TMED4-204ENST00000477639 RFLNAQ6ZTI6 216 aa20.19■□□□□ 0.82
TMED4-204ENST00000477639 GPR141Q7Z602 305 aa20.19■□□□□ 0.82
TMED4-204ENST00000477639 TMC8Q8IU68 726 aa20.19■□□□□ 0.82
TMED4-204ENST00000477639 HOMEZQ8IX15 550 aa20.19■□□□□ 0.82
TMED4-204ENST00000477639 SLC22A17Q8WUG5 538 aa20.19■□□□□ 0.82
TMED4-204ENST00000477639 ULK4Q96C45 1275 aa20.19■□□□□ 0.82
TMED4-204ENST00000477639 YTHDF1Q9BYJ9 559 aaKnown RBP20.19■□□□□ 0.82
TMED4-204ENST00000477639 RC3H2Q9HBD1 1191 aaKnown RBP20.19■□□□□ 0.82
TMED4-204ENST00000477639 TIMMDC1Q9NPL8 285 aa20.19■□□□□ 0.82
TMED4-204ENST00000477639 C1orf109Q9NX04 203 aa20.19■□□□□ 0.82
TMED4-204ENST00000477639 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.19■□□□□ 0.82
TMED4-204ENST00000477639 TBX21Q9UL17 535 aa20.19■□□□□ 0.82
TMED4-204ENST00000477639 PDE10AQ9Y233 779 aa20.19■□□□□ 0.82
TMED4-204ENST00000477639 TRBV5-3A0A0A0MS03 114 aa20.18■□□□□ 0.82
TMED4-204ENST00000477639 KIAA0355O15063 1070 aa20.18■□□□□ 0.82
TMED4-204ENST00000477639 LILRB3O75022 631 aa20.18■□□□□ 0.82
TMED4-204ENST00000477639 CLDN9O95484 217 aa20.18■□□□□ 0.82
TMED4-204ENST00000477639 BCKDHAP12694 445 aa20.18■□□□□ 0.82
TMED4-204ENST00000477639 CHRNB3Q05901 458 aa20.18■□□□□ 0.82
TMED4-204ENST00000477639 ATP13A5Q4VNC0 1218 aa20.18■□□□□ 0.82
TMED4-204ENST00000477639 FAM117BQ6P1L5 589 aa20.18■□□□□ 0.82
TMED4-204ENST00000477639 FAM86B1Q8N7N1 296 aa20.18■□□□□ 0.82
TMED4-204ENST00000477639 OR10A6Q8NH74 314 aa20.18■□□□□ 0.82
TMED4-204ENST00000477639 TMBIM1Q969X1 311 aa20.18■□□□□ 0.82
TMED4-204ENST00000477639 MCCC1Q96RQ3 725 aaPredicted RBP20.18■□□□□ 0.82
TMED4-204ENST00000477639 COPS8Q99627 209 aa20.18■□□□□ 0.82
TMED4-204ENST00000477639 NPLQ9BXD5 320 aaPredicted RBP20.18■□□□□ 0.82
TMED4-204ENST00000477639 SLC32A1Q9H598 525 aa20.18■□□□□ 0.82
TMED4-204ENST00000477639 SUV39H2Q9H5I1 410 aa20.18■□□□□ 0.82
TMED4-204ENST00000477639 HECAQ9UBI9 543 aaPredicted RBP20.18■□□□□ 0.82
TMED4-204ENST00000477639 ZNHIT2Q9UHR6 403 aa20.18■□□□□ 0.82
TMED4-204ENST00000477639 IGLV3-16A0A075B6K0 115 aa20.17■□□□□ 0.82
TMED4-204ENST00000477639 CXorf51AA0A1B0GTR3 108 aa20.17■□□□□ 0.82
TMED4-204ENST00000477639 EIF3FO00303 357 aaPredicted RBP20.17■□□□□ 0.82
TMED4-204ENST00000477639 AREL1O15033 823 aa20.17■□□□□ 0.82
TMED4-204ENST00000477639 GMNNO75496 209 aa20.17■□□□□ 0.82
TMED4-204ENST00000477639 LHCGRP22888 699 aa20.17■□□□□ 0.82
TMED4-204ENST00000477639 RPIAP49247 311 aa20.17■□□□□ 0.82
TMED4-204ENST00000477639 ALDH3A2P51648 485 aa20.17■□□□□ 0.82
TMED4-204ENST00000477639 ARSFP54793 590 aa20.17■□□□□ 0.82
TMED4-204ENST00000477639 ESRRGP62508 458 aa20.17■□□□□ 0.82
TMED4-204ENST00000477639 DAG1Q14118 895 aa20.17■□□□□ 0.82
TMED4-204ENST00000477639 NKG7Q16617 165 aa20.17■□□□□ 0.82
TMED4-204ENST00000477639 ZXDCQ2QGD7 858 aaPredicted RBP20.17■□□□□ 0.82
TMED4-204ENST00000477639 OR52E4Q8NGH9 312 aa20.17■□□□□ 0.82
TMED4-204ENST00000477639 FIG4Q92562 907 aa20.17■□□□□ 0.82
TMED4-204ENST00000477639 MTFMTQ96DP5 389 aaKnown RBP20.17■□□□□ 0.82
TMED4-204ENST00000477639 THUMPD3Q9BV44 507 aaKnown RBP20.17■□□□□ 0.82
TMED4-204ENST00000477639 UGT2B28Q9BY64 529 aa20.17■□□□□ 0.82
TMED4-204ENST00000477639 ACPTQ9BZG2 426 aa20.17■□□□□ 0.82
TMED4-204ENST00000477639 GSTA4O15217 222 aa20.17■□□□□ 0.82
TMED4-204ENST00000477639 GBX1Q14549 363 aa20.17■□□□□ 0.82
TMED4-204ENST00000477639 ENPP6Q6UWR7 440 aa20.17■□□□□ 0.82
TMED4-204ENST00000477639 PLPP6Q8IY26 295 aa20.17■□□□□ 0.82
TMED4-204ENST00000477639 ASIC4Q96FT7 647 aa20.17■□□□□ 0.82
TMED4-204ENST00000477639 ABCG8Q9H221 673 aa20.17■□□□□ 0.82
TMED4-204ENST00000477639 LIN28AQ9H9Z2 209 aaKnown RBP20.17■□□□□ 0.82
TMED4-204ENST00000477639 ARL15Q9NXU5 204 aa20.17■□□□□ 0.82
TMED4-204ENST00000477639 ATXN10Q9UBB4 475 aa20.17■□□□□ 0.82
TMED4-204ENST00000477639 KCNE1BA0A087WTH5 132 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms