RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 VAPBO95292 243 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 F7P08709 466 aaPredicted RBP8.04□□□□□ -1.12
HDAC6-221ENST00000477561 FAM153BP0C7A2 387 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 EBLN1P0CF75 366 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 LIFP15018 202 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 FOLR1P15328 257 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 NELFEP18615 380 aaKnown RBP8.04□□□□□ -1.12
HDAC6-221ENST00000477561 ARNTP27540 789 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 CCR7P32248 378 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 PPARGP37231 505 aaPredicted RBP8.04□□□□□ -1.12
HDAC6-221ENST00000477561 CD151P48509 253 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 KPNA2P52292 529 aaKnown RBP8.04□□□□□ -1.12
HDAC6-221ENST00000477561 PMS2P54278 862 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 ARL4CP56559 192 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 CDK16Q00536 496 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 HSPA14Q0VDF9 509 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 ABRQ12979 859 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 PRKAA1Q13131 559 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 RPA4Q13156 261 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 FAM153CQ494X1 144 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 TAF1BQ53T94 588 aaPredicted RBP8.04□□□□□ -1.12
HDAC6-221ENST00000477561 AARS2Q5JTZ9 985 aaKnown RBP8.04□□□□□ -1.12
HDAC6-221ENST00000477561 PTRHD1Q6GMV3 140 aaKnown RBP8.04□□□□□ -1.12
HDAC6-221ENST00000477561 CENPUQ71F23 418 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 TRMT10CQ7L0Y3 403 aaKnown RBP8.04□□□□□ -1.12
HDAC6-221ENST00000477561 VRK3Q8IV63 474 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 ACVR1CQ8NER5 493 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 OR5AR1Q8NGP9 310 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 CFAP61Q8NHU2 1237 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 PEX13Q92968 403 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 TEFMQ96QE5 360 aaKnown RBP8.04□□□□□ -1.12
HDAC6-221ENST00000477561 RUFY1Q96T51 708 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 KIFC1Q9BW19 673 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 FUT8Q9BYC5 575 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 ULBP3Q9BZM4 244 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 SPRY4Q9C004 299 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 KLHL25Q9H0H3 589 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 MVB12BQ9H7P6 319 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 ZNF446Q9NWS9 450 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 IL1RAPL1Q9NZN1 696 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 CIDEBQ9UHD4 219 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 PLAGL1Q9UM63 463 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 SOX13Q9UN79 622 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 ASF1AQ9Y294 204 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 SDK2Q58EX2 2172 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 TLCD2A6NGC4 264 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 SLC9B1P1A6NJY1 282 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 BTN3A1O00481 513 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 PRMT5O14744 637 aaPredicted RBP8.03□□□□□ -1.12
HDAC6-221ENST00000477561 ATXN7O15265 892 aaPredicted RBP8.03□□□□□ -1.12
HDAC6-221ENST00000477561 SPAG6O75602 509 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 KIAA0754O94854 1291 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 TIAF1O95411 115 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 GSTM1P09488 218 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 TPBGLP0DKB5 382 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 PVRP15151 417 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 CDH3P22223 829 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 ACADLP28330 430 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 PRDX3P30048 256 aaKnown RBP8.03□□□□□ -1.12
HDAC6-221ENST00000477561 FMO4P31512 558 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 MAGEA6P43360 314 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 TTPAP49638 278 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 EIF3BP55884 814 aaKnown RBP8.03□□□□□ -1.12
HDAC6-221ENST00000477561 RHDQ02161 417 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 GSTM4Q03013 218 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 TUBB3Q13509 450 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 LY6DQ14210 128 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 GPR19Q15760 415 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 DNAJC21Q5F1R6 531 aaKnown RBP8.03□□□□□ -1.12
HDAC6-221ENST00000477561 SDCCAG8Q86SQ7 713 aaPredicted RBP8.03□□□□□ -1.12
HDAC6-221ENST00000477561 AMIGO1Q86WK6 493 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 CCDC25Q86WR0 208 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 RELL1Q8IUW5 271 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 SPNS2Q8IVW8 549 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 NLGN4XQ8N0W4 816 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 PDIK1LQ8N165 341 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 NAT8LQ8N9F0 302 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 LMNTD1Q8N9Z9 388 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 ZSCAN1Q8NBB4 408 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 GALNT6Q8NCL4 622 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 MCUQ8NE86 351 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 NLGN4YQ8NFZ3 816 aaPredicted RBP8.03□□□□□ -1.12
HDAC6-221ENST00000477561 SNRNP27Q8WVK2 155 aaKnown RBP8.03□□□□□ -1.12
HDAC6-221ENST00000477561 UBLCP1Q8WVY7 318 aaPredicted RBP8.03□□□□□ -1.12
HDAC6-221ENST00000477561 EXTL1Q92935 676 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 ZNF669Q96BR6 464 aaPredicted RBP8.03□□□□□ -1.12
HDAC6-221ENST00000477561 FAM136AQ96C01 138 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 SGSM3Q96HU1 749 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 SLC41A2Q96JW4 573 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 SERPINB12Q96P63 405 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 ZPBPQ9BS86 351 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 P2RY12Q9H244 342 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 TRIT1Q9H3H1 467 aaKnown RBP8.03□□□□□ -1.12
HDAC6-221ENST00000477561 TFB2MQ9H5Q4 396 aaKnown RBP8.03□□□□□ -1.12
HDAC6-221ENST00000477561 OCEL1Q9H607 264 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 MRM3Q9HC36 420 aaKnown RBP8.03□□□□□ -1.12
HDAC6-221ENST00000477561 SOHLH2Q9NX45 425 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 SAMD15Q9P1V8 674 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 SEMA5BQ9P283 1151 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 LNPEPQ9UIQ6 1025 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms