RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 PRMT7Q9NVM4 692 aaPredicted RBP3.06□□□□□ -1.92
TARDBP-208ENST00000477447 BCCIPQ9P287 314 aaKnown RBP eCLIP3.06□□□□□ -1.92
TARDBP-208ENST00000477447 B3GAT1Q9P2W7 334 aa3.06□□□□□ -1.92
TARDBP-208ENST00000477447 IL17BQ9UHF5 180 aa3.06□□□□□ -1.92
TARDBP-208ENST00000477447 MTUS1Q9ULD2 1270 aa3.06□□□□□ -1.92
TARDBP-208ENST00000477447 PADI2Q9Y2J8 665 aa3.06□□□□□ -1.92
TARDBP-208ENST00000477447 NME7Q9Y5B8 376 aa3.06□□□□□ -1.92
TARDBP-208ENST00000477447 TRIM77I1YAP6 450 aa3.05□□□□□ -1.92
TARDBP-208ENST00000477447 SLC22A2O15244 555 aa3.05□□□□□ -1.92
TARDBP-208ENST00000477447 SPRY1O43609 319 aaPredicted RBP3.05□□□□□ -1.92
TARDBP-208ENST00000477447 PLOD3O60568 738 aa3.05□□□□□ -1.92
TARDBP-208ENST00000477447 GGPS1O95749 300 aa3.05□□□□□ -1.92
TARDBP-208ENST00000477447 WDPCPO95876 746 aa3.05□□□□□ -1.92
TARDBP-208ENST00000477447 HSP90AA1P07900 732 aaKnown RBP3.05□□□□□ -1.92
TARDBP-208ENST00000477447 DANCRP0C864 163 aa3.05□□□□□ -1.92
TARDBP-208ENST00000477447 SLC6A6P31641 620 aa3.05□□□□□ -1.92
TARDBP-208ENST00000477447 PCGF2P35227 344 aa3.05□□□□□ -1.92
TARDBP-208ENST00000477447 PPP5CP53041 499 aa3.05□□□□□ -1.92
TARDBP-208ENST00000477447 KYNUQ16719 465 aa3.05□□□□□ -1.92
TARDBP-208ENST00000477447 PHLDA2Q53GA4 152 aa3.05□□□□□ -1.92
TARDBP-208ENST00000477447 KRT39Q6A163 491 aa3.05□□□□□ -1.92
TARDBP-208ENST00000477447 RPUSD3Q6P087 351 aaKnown RBP3.05□□□□□ -1.92
TARDBP-208ENST00000477447 MFSD6Q6ZSS7 791 aa3.05□□□□□ -1.92
TARDBP-208ENST00000477447 SH2D5Q6ZV89 423 aa3.05□□□□□ -1.92
TARDBP-208ENST00000477447 TMPRSS11BQ86T26 416 aa3.05□□□□□ -1.92
TARDBP-208ENST00000477447 KBTBD8Q8NFY9 601 aa3.05□□□□□ -1.92
TARDBP-208ENST00000477447 GRHL3Q8TE85 626 aa3.05□□□□□ -1.92
TARDBP-208ENST00000477447 SSMEM1Q8WWF3 244 aa3.05□□□□□ -1.92
TARDBP-208ENST00000477447 IRGQQ8WZA9 623 aa3.05□□□□□ -1.92
TARDBP-208ENST00000477447 HSD17B8Q92506 261 aa3.05□□□□□ -1.92
TARDBP-208ENST00000477447 ZNF501Q96CX3 271 aaPredicted RBP3.05□□□□□ -1.92
TARDBP-208ENST00000477447 FSD1Q9BTV5 496 aa3.05□□□□□ -1.92
TARDBP-208ENST00000477447 Q9N2K0 584 aa3.05□□□□□ -1.92
TARDBP-208ENST00000477447 SIX2Q9NPC8 291 aa3.05□□□□□ -1.92
TARDBP-208ENST00000477447 SERINC1Q9NRX5 453 aa3.05□□□□□ -1.92
TARDBP-208ENST00000477447 GKN1Q9NS71 199 aa3.05□□□□□ -1.92
TARDBP-208ENST00000477447 WDR35Q9P2L0 1181 aa3.05□□□□□ -1.92
TARDBP-208ENST00000477447 NFKBIL1Q9UBC1 381 aaPredicted RBP3.05□□□□□ -1.92
TARDBP-208ENST00000477447 ZDHHC2Q9UIJ5 367 aa3.05□□□□□ -1.92
TARDBP-208ENST00000477447 C2CD2Q9Y426 696 aa3.05□□□□□ -1.92
TARDBP-208ENST00000477447 A0A1W2PPM1 405 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 URADA6NGE7 173 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 ZNF197O14709 1029 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 PCDH7O60245 1069 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 RNASEH1O60930 286 aaKnown RBP3.04□□□□□ -1.92
TARDBP-208ENST00000477447 PLGP00747 810 aaPredicted RBP3.04□□□□□ -1.92
TARDBP-208ENST00000477447 RAB40ALP0C0E4 278 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 PATE4P0C8F1 98 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 ERVK-10P10266 1014 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 CA4P22748 312 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 TCEA1P23193 301 aaKnown RBP3.04□□□□□ -1.92
TARDBP-208ENST00000477447 JAK1P23458 1154 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 MT3P25713 68 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 CDKN1AP38936 164 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 RAB28P51157 221 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 MAPK12P53778 367 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 HYAL1Q12794 435 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 GPR17Q13304 367 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 TAF13Q15543 124 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 VWC2Q2TAL6 325 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 ZNF876PQ49A33 203 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 CRY2Q49AN0 593 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 GTDC1Q4AE62 458 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 ZNF628Q5EBL2 1059 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 ARMC4Q5T2S8 1044 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 GFI1BQ5VTD9 330 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 ARHGEF16Q5VV41 709 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 KRT80Q6KB66 452 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 C15orf39Q6ZRI6 1047 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 ZBTB49Q6ZSB9 765 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 ARHGAP22Q7Z5H3 698 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 KLHDC8BQ8IXV7 354 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 CDK20Q8IZL9 346 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 TTC30BQ8N4P2 665 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 TDRD5Q8NAT2 981 aaKnown RBP3.04□□□□□ -1.92
TARDBP-208ENST00000477447 XXYLT1Q8NBI6 393 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 SLC4A11Q8NBS3 891 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 NPEPL1Q8NDH3 523 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 OR11H4Q8NGC9 324 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 OLIG1Q8TAK6 271 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 ATL1Q8WXF7 558 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 CNDP2Q96KP4 475 aaKnown RBP3.04□□□□□ -1.92
TARDBP-208ENST00000477447 F2RL3Q96RI0 385 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 SERINC2Q96SA4 455 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 NUP85Q9BW27 656 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 LAT2Q9GZY6 243 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 VPS33BQ9H267 617 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 RABEP2Q9H5N1 569 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 MYNNQ9NPC7 610 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 PIH1D3Q9NQM4 214 aaKnown RBP3.04□□□□□ -1.92
TARDBP-208ENST00000477447 CACNG4Q9UBN1 327 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 DAPK2Q9UIK4 370 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 CPSF3Q9UKF6 684 aaKnown RBP3.04□□□□□ -1.92
TARDBP-208ENST00000477447 RNF150Q9ULK6 438 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 ABT1Q9ULW3 272 aaKnown RBP3.04□□□□□ -1.92
TARDBP-208ENST00000477447 KCNJ14Q9UNX9 436 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 RIPK3Q9Y572 518 aa3.04□□□□□ -1.92
TARDBP-208ENST00000477447 TCF20Q9UGU0 1960 aaKnown RBP3.03□□□□□ -1.92
TARDBP-208ENST00000477447 PCDH11YQ9BZA8 1340 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 STK36Q9NRP7 1315 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms