RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 NFATC4Q14934 902 aa11.3□□□□□ -0.6
LSM2-212ENST00000477182 KRTAP21-3Q3LHN1 58 aa11.3□□□□□ -0.6
LSM2-212ENST00000477182 RBM20Q5T481 1227 aaKnown RBP11.3□□□□□ -0.6
LSM2-212ENST00000477182 PHF19Q5T6S3 580 aa11.3□□□□□ -0.6
LSM2-212ENST00000477182 GRTP1Q5TC63 336 aa11.3□□□□□ -0.6
LSM2-212ENST00000477182 ZNF549Q6P9A3 640 aa11.3□□□□□ -0.6
LSM2-212ENST00000477182 HDXQ7Z353 690 aa11.3□□□□□ -0.6
LSM2-212ENST00000477182 ZC3HC1Q86WB0 502 aaKnown RBP11.3□□□□□ -0.6
LSM2-212ENST00000477182 GKN2Q86XP6 184 aa11.3□□□□□ -0.6
LSM2-212ENST00000477182 SRRM1Q8IYB3 904 aaKnown RBP11.3□□□□□ -0.6
LSM2-212ENST00000477182 CACNA2D3Q8IZS8 1091 aa11.3□□□□□ -0.6
LSM2-212ENST00000477182 CLDN19Q8N6F1 224 aa11.3□□□□□ -0.6
LSM2-212ENST00000477182 RASGEF1AQ8N9B8 481 aa11.3□□□□□ -0.6
LSM2-212ENST00000477182 VPS39Q96JC1 886 aa11.3□□□□□ -0.6
LSM2-212ENST00000477182 WDR92Q96MX6 357 aa11.3□□□□□ -0.6
LSM2-212ENST00000477182 NDNQ99608 321 aa11.3□□□□□ -0.6
LSM2-212ENST00000477182 RBBP8Q99708 897 aa11.3□□□□□ -0.6
LSM2-212ENST00000477182 MCMBPQ9BTE3 642 aa11.3□□□□□ -0.6
LSM2-212ENST00000477182 ZCCHC2Q9C0B9 1178 aaKnown RBP11.3□□□□□ -0.6
LSM2-212ENST00000477182 P2RY12Q9H244 342 aa11.3□□□□□ -0.6
LSM2-212ENST00000477182 RHOJQ9H4E5 214 aa11.3□□□□□ -0.6
LSM2-212ENST00000477182 ZNF768Q9H5H4 540 aaKnown RBP11.3□□□□□ -0.6
LSM2-212ENST00000477182 TRIM39Q9HCM9 518 aa11.3□□□□□ -0.6
LSM2-212ENST00000477182 CTNNAL1Q9UBT7 734 aa11.3□□□□□ -0.6
LSM2-212ENST00000477182 FETUBQ9UGM5 382 aa11.3□□□□□ -0.6
LSM2-212ENST00000477182 SLC24A2Q9UI40 661 aa11.3□□□□□ -0.6
LSM2-212ENST00000477182 GPR34Q9UPC5 381 aa11.3□□□□□ -0.6
LSM2-212ENST00000477182 PCDHGA3Q9Y5H0 932 aa11.3□□□□□ -0.6
LSM2-212ENST00000477182 RNF215Q9Y6U7 377 aa11.3□□□□□ -0.6
LSM2-212ENST00000477182 CSMD1Q96PZ7 3565 aa11.3□□□□□ -0.6
LSM2-212ENST00000477182 OR2AG2A6NM03 316 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 AGRPO00253 132 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 RASGRF2O14827 1237 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 SGTAO43765 313 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 VEGFDO43915 354 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 SEMA7AO75326 666 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 CDK14O94921 469 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 CEACAM5P06731 702 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 CTSEP14091 401 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 ATP1B2P14415 290 aaPredicted RBP11.29□□□□□ -0.6
LSM2-212ENST00000477182 GLB1P16278 677 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 ZNF8P17098 575 aaPredicted RBP11.29□□□□□ -0.6
LSM2-212ENST00000477182 RPS3P23396 243 aaKnown RBP eCLIP11.29□□□□□ -0.62e-11■■■□□ 19.2
LSM2-212ENST00000477182 SPRP35270 261 aaPredicted RBP11.29□□□□□ -0.6
LSM2-212ENST00000477182 NSG1P42857 185 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 CTSCP53634 463 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 LIMK2P53671 638 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 MC1RQ01726 317 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 ZNF844Q08AG5 666 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 CDC20Q12834 499 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 BMPR2Q13873 1038 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 GTF2H3Q13889 308 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 TMED2Q15363 201 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 CTSL3PQ5NE16 218 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 KCTD16Q68DU8 428 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 PTRHD1Q6GMV3 140 aaKnown RBP11.29□□□□□ -0.6
LSM2-212ENST00000477182 ADGRD1Q6QNK2 874 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 CRTC3Q6UUV7 619 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 ENPP7Q6UWV6 458 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 LRIG3Q6UXM1 1119 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 MACC1Q6ZN28 852 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 SLITRK4Q8IW52 837 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 GPATCH11Q8N954 259 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 Q8N9G6 341 aaPredicted RBP11.29□□□□□ -0.6
LSM2-212ENST00000477182 ACVR1CQ8NER5 493 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 HEXDCQ8WVB3 486 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 KIAA1143Q96AT1 154 aaPredicted RBP11.29□□□□□ -0.6
LSM2-212ENST00000477182 ELMO2Q96JJ3 720 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 BIRC8Q96P09 236 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 AARSD1Q9BTE6 412 aaKnown RBP11.29□□□□□ -0.6
LSM2-212ENST00000477182 CCDC68Q9H2F9 335 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 PPCSQ9HAB8 311 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 FGF22Q9HCT0 170 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 ZNF446Q9NWS9 450 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 PSMC3IPQ9P2W1 217 aaPredicted RBP11.29□□□□□ -0.6
LSM2-212ENST00000477182 TBK1Q9UHD2 729 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 MOSPD1Q9UJG1 213 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 GNPTGQ9UJJ9 305 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 TP53TG5Q9Y2B4 290 aa11.29□□□□□ -0.6
LSM2-212ENST00000477182 MTO1Q9Y2Z2 717 aaKnown RBP11.29□□□□□ -0.6
LSM2-212ENST00000477182 PCYT1BQ9Y5K3 369 aaPredicted RBP11.29□□□□□ -0.6
LSM2-212ENST00000477182 FAM95CA0A1B0GW59 222 aa11.28□□□□□ -0.6
LSM2-212ENST00000477182 IQCF5A8MTL0 148 aa11.28□□□□□ -0.6
LSM2-212ENST00000477182 MKRN2OSH3BPM6 223 aa11.28□□□□□ -0.6
LSM2-212ENST00000477182 HGSO14964 777 aaPredicted RBP11.28□□□□□ -0.6
LSM2-212ENST00000477182 NKX2-8O15522 239 aa11.28□□□□□ -0.6
LSM2-212ENST00000477182 NUAK1O60285 661 aa11.28□□□□□ -0.6
LSM2-212ENST00000477182 NIPSNAP2O75323 286 aa11.28□□□□□ -0.6
LSM2-212ENST00000477182 AP2A2O94973 939 aa11.28□□□□□ -0.6
LSM2-212ENST00000477182 ESR1P03372 595 aa11.28□□□□□ -0.6
LSM2-212ENST00000477182 FUCA1P04066 466 aa11.28□□□□□ -0.6
LSM2-212ENST00000477182 PKMP14618 531 aaKnown RBP11.28□□□□□ -0.6
LSM2-212ENST00000477182 SAT1P21673 171 aa11.28□□□□□ -0.6
LSM2-212ENST00000477182 KELP23276 732 aa11.28□□□□□ -0.6
LSM2-212ENST00000477182 COL8A1P27658 744 aa11.28□□□□□ -0.6
LSM2-212ENST00000477182 HTR1BP28222 390 aa11.28□□□□□ -0.6
LSM2-212ENST00000477182 SERPINB9P50453 376 aa11.28□□□□□ -0.6
LSM2-212ENST00000477182 ADARP55265 1226 aaKnown RBP11.28□□□□□ -0.6
LSM2-212ENST00000477182 KRT71Q3SY84 523 aa11.28□□□□□ -0.6
LSM2-212ENST00000477182 CEP85LQ5SZL2 805 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms