RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 CD151P48509 253 aa11.27□□□□□ -0.61
VARS2-208ENST00000477052 VAV2P52735 878 aa11.27□□□□□ -0.61
VARS2-208ENST00000477052 MRPL49Q13405 166 aaKnown RBP11.27□□□□□ -0.61
VARS2-208ENST00000477052 NCF4Q15080 339 aa11.27□□□□□ -0.61
VARS2-208ENST00000477052 ZNF385CQ66K41 422 aaPredicted RBP11.27□□□□□ -0.61
VARS2-208ENST00000477052 KIAA1328Q86T90 577 aa11.27□□□□□ -0.61
VARS2-208ENST00000477052 LDB1Q86U70 411 aaPredicted RBP11.27□□□□□ -0.61
VARS2-208ENST00000477052 TAX1BP1Q86VP1 789 aa11.27□□□□□ -0.61
VARS2-208ENST00000477052 TMTC1Q8IUR5 882 aa11.27□□□□□ -0.61
VARS2-208ENST00000477052 VRK3Q8IV63 474 aa11.27□□□□□ -0.61
VARS2-208ENST00000477052 CARFQ8N187 725 aa11.27□□□□□ -0.61
VARS2-208ENST00000477052 EFCAB3Q8N7B9 438 aa11.27□□□□□ -0.61
VARS2-208ENST00000477052 RBMXL3Q8N7X1 1067 aaKnown RBP11.27□□□□□ -0.61
VARS2-208ENST00000477052 C19orf47Q8N9M1 422 aaKnown RBP11.27□□□□□ -0.61
VARS2-208ENST00000477052 Q8NA96 180 aa11.27□□□□□ -0.61
VARS2-208ENST00000477052 FLVCR1-AS1Q8TAF5 88 aa11.27□□□□□ -0.61
VARS2-208ENST00000477052 LKAAEAR1Q8TD35 194 aa11.27□□□□□ -0.61
VARS2-208ENST00000477052 STYXQ8WUJ0 223 aa11.27□□□□□ -0.61
VARS2-208ENST00000477052 HEXDCQ8WVB3 486 aa11.27□□□□□ -0.61
VARS2-208ENST00000477052 N4BP2L2Q92802 583 aaPredicted RBP11.27□□□□□ -0.61
VARS2-208ENST00000477052 HDAC10Q969S8 669 aa11.27□□□□□ -0.61
VARS2-208ENST00000477052 C19orf60Q96EN9 201 aa11.27□□□□□ -0.61
VARS2-208ENST00000477052 ZNF778Q96MU6 729 aa11.27□□□□□ -0.61
VARS2-208ENST00000477052 VPS37BQ9H9H4 285 aa11.27□□□□□ -0.61
VARS2-208ENST00000477052 AMFRQ9UKV5 643 aa11.27□□□□□ -0.61
VARS2-208ENST00000477052 CDYLQ9Y232 598 aa11.27□□□□□ -0.61
VARS2-208ENST00000477052 PCDHGA9Q9Y5G4 932 aaKnown RBP11.27□□□□□ -0.61
VARS2-208ENST00000477052 FER1L5A0AVI2 2057 aa11.27□□□□□ -0.61
VARS2-208ENST00000477052 SEC16AO15027 2179 aa11.26□□□□□ -0.61
VARS2-208ENST00000477052 SHANK1Q9Y566 2161 aa11.26□□□□□ -0.61
VARS2-208ENST00000477052 MROH6A6NGR9 719 aa11.26□□□□□ -0.61
VARS2-208ENST00000477052 BTNL10A8MVZ5 291 aa11.26□□□□□ -0.61
VARS2-208ENST00000477052 MATN2O00339 956 aa11.26□□□□□ -0.61
VARS2-208ENST00000477052 ALOX12BO75342 701 aa11.26□□□□□ -0.61
VARS2-208ENST00000477052 KLF7O75840 302 aaPredicted RBP11.26□□□□□ -0.61
VARS2-208ENST00000477052 CEACAM4O75871 244 aa11.26□□□□□ -0.61
VARS2-208ENST00000477052 OR2B3O76000 313 aa11.26□□□□□ -0.61
VARS2-208ENST00000477052 SORBS2O94875 1100 aaKnown RBP11.26□□□□□ -0.61
VARS2-208ENST00000477052 AGFG2O95081 481 aa11.26□□□□□ -0.61
VARS2-208ENST00000477052 IPO7O95373 1038 aaKnown RBP11.26□□□□□ -0.61
VARS2-208ENST00000477052 AP2A1O95782 977 aa11.26□□□□□ -0.61
VARS2-208ENST00000477052 ETS1P14921 441 aa11.26□□□□□ -0.61
VARS2-208ENST00000477052 FOXN2P32314 431 aa11.26□□□□□ -0.61
VARS2-208ENST00000477052 GABRA4P48169 554 aa11.26□□□□□ -0.61
VARS2-208ENST00000477052 RPA4Q13156 261 aa11.26□□□□□ -0.61
VARS2-208ENST00000477052 KLF1Q13351 362 aaPredicted RBP11.26□□□□□ -0.61
VARS2-208ENST00000477052 SEMA3AQ14563 771 aa11.26□□□□□ -0.61
VARS2-208ENST00000477052 INPP5JQ15735 1006 aaPredicted RBP11.26□□□□□ -0.61
VARS2-208ENST00000477052 EIF2S3LQ2VIR3 472 aaKnown RBP11.26□□□□□ -0.61
VARS2-208ENST00000477052 SYTL3Q4VX76 610 aa11.26□□□□□ -0.61
VARS2-208ENST00000477052 SLC6A19Q695T7 634 aa11.26□□□□□ -0.61
VARS2-208ENST00000477052 JMJD6Q6NYC1 403 aaPredicted RBP11.26□□□□□ -0.61
VARS2-208ENST00000477052 ZNF449Q6P9G9 518 aa11.26□□□□□ -0.61
VARS2-208ENST00000477052 HOOK3Q86VS8 718 aa11.26□□□□□ -0.61
VARS2-208ENST00000477052 ZNF655Q8N720 491 aaPredicted RBP11.26□□□□□ -0.61
VARS2-208ENST00000477052 DNAAF3Q8N9W5 541 aa11.26□□□□□ -0.61
VARS2-208ENST00000477052 OR13J1Q8NGT2 312 aa11.26□□□□□ -0.61
VARS2-208ENST00000477052 CFAP61Q8NHU2 1237 aa11.26□□□□□ -0.61
VARS2-208ENST00000477052 SLC35B2Q8TB61 432 aa11.26□□□□□ -0.61
VARS2-208ENST00000477052 SEC14L1Q92503 715 aa11.26□□□□□ -0.61
VARS2-208ENST00000477052 MRFAP1L1Q96HT8 127 aa11.26□□□□□ -0.61
VARS2-208ENST00000477052 IL17FQ96PD4 163 aa11.26□□□□□ -0.61
VARS2-208ENST00000477052 ALS2CR12Q96Q35 445 aa11.26□□□□□ -0.61
VARS2-208ENST00000477052 LRRC4CQ9HCJ2 640 aa11.26□□□□□ -0.61
VARS2-208ENST00000477052 IRAK4Q9NWZ3 460 aa11.26□□□□□ -0.61
VARS2-208ENST00000477052 FEZ2Q9UHY8 353 aaPredicted RBP11.26□□□□□ -0.61
VARS2-208ENST00000477052 PTRH2Q9Y3E5 179 aaKnown RBP11.26□□□□□ -0.61
VARS2-208ENST00000477052 MAP4K5Q9Y4K4 846 aa11.26□□□□□ -0.61
VARS2-208ENST00000477052 SPTAN1Q13813 2472 aaKnown RBP11.26□□□□□ -0.61
VARS2-208ENST00000477052 RP1L1Q8IWN7 2480 aaPredicted RBP11.26□□□□□ -0.61
VARS2-208ENST00000477052 SNRNP200O75643 2136 aaKnown RBP11.26□□□□□ -0.61
VARS2-208ENST00000477052 PRRC2CQ9Y520 2896 aaKnown RBP11.26□□□□□ -0.61
VARS2-208ENST00000477052 NBPF19A0A087WUL8 3843 aa11.25□□□□□ -0.61
VARS2-208ENST00000477052 SLC5A10A0PJK1 596 aa11.25□□□□□ -0.61
VARS2-208ENST00000477052 A1L4Q6 167 aa11.25□□□□□ -0.61
VARS2-208ENST00000477052 KRT87PA6NCN2 255 aa11.25□□□□□ -0.61
VARS2-208ENST00000477052 GOLGA6L9A6NEM1 432 aa11.25□□□□□ -0.61
VARS2-208ENST00000477052 ISM1B1AKI9 464 aa11.25□□□□□ -0.61
VARS2-208ENST00000477052 TCP11X1B4DZS4 312 aa11.25□□□□□ -0.61
VARS2-208ENST00000477052 C9J4A7 227 aa11.25□□□□□ -0.61
VARS2-208ENST00000477052 H3BMH7 237 aa11.25□□□□□ -0.61
VARS2-208ENST00000477052 MAP3K7O43318 606 aa11.25□□□□□ -0.61
VARS2-208ENST00000477052 AP2A2O94973 939 aa11.25□□□□□ -0.61
VARS2-208ENST00000477052 GOT2P00505 430 aaKnown RBP11.25□□□□□ -0.61
VARS2-208ENST00000477052 GRIA3P42263 894 aa11.25□□□□□ -0.61
VARS2-208ENST00000477052 NSG1P42857 185 aa11.25□□□□□ -0.61
VARS2-208ENST00000477052 SNX1Q13596 522 aa11.25□□□□□ -0.61
VARS2-208ENST00000477052 C4orf17Q53FE4 359 aa11.25□□□□□ -0.61
VARS2-208ENST00000477052 PAPD7Q5XG87 772 aaKnown RBP11.25□□□□□ -0.61
VARS2-208ENST00000477052 MRGPREQ86SM8 312 aa11.25□□□□□ -0.61
VARS2-208ENST00000477052 TMEM139Q8IV31 216 aa11.25□□□□□ -0.61
VARS2-208ENST00000477052 GPR135Q8IZ08 494 aa11.25□□□□□ -0.61
VARS2-208ENST00000477052 KRT222Q8N1A0 295 aa11.25□□□□□ -0.61
VARS2-208ENST00000477052 UBL4BQ8N7F7 174 aa11.25□□□□□ -0.61
VARS2-208ENST00000477052 GLIS1Q8NBF1 620 aa11.25□□□□□ -0.61
VARS2-208ENST00000477052 GALNT11Q8NCW6 608 aa11.25□□□□□ -0.61
VARS2-208ENST00000477052 C1orf54Q8WWF1 131 aa11.25□□□□□ -0.61
VARS2-208ENST00000477052 LRRC45Q96CN5 670 aa11.25□□□□□ -0.61
VARS2-208ENST00000477052 PPP1R2P1Q96PQ5 205 aa11.25□□□□□ -0.61
VARS2-208ENST00000477052 ETNK1Q9HBU6 452 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms