RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 RPL10P27635 214 aaKnown RBP10.78□□□□□ -0.68
VAPB-204ENST00000475243 PUS10Q3MIT2 529 aaKnown RBP10.78□□□□□ -0.68
VAPB-204ENST00000475243 KCTD8Q6ZWB6 473 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 RASGRP3Q8IV61 690 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 OR5AK3PQ8NH89 298 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 COMMD4Q9H0A8 199 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 RNF121Q9H920 327 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 COMMD3-BMI1R4GMX3 469 aa10.78□□□□□ -0.68
VAPB-204ENST00000475243 TOR1BO14657 336 aa10.77□□□□□ -0.68
VAPB-204ENST00000475243 NRP1O14786 923 aa10.77□□□□□ -0.68
VAPB-204ENST00000475243 GDI1P31150 447 aa10.77□□□□□ -0.68
VAPB-204ENST00000475243 PTGER3P43115 390 aa10.77□□□□□ -0.68
VAPB-204ENST00000475243 TAS2R39P59534 338 aa10.77□□□□□ -0.68
VAPB-204ENST00000475243 ECT2LQ008S8 904 aa10.77□□□□□ -0.68
VAPB-204ENST00000475243 SYPL2Q5VXT5 272 aa10.77□□□□□ -0.68
VAPB-204ENST00000475243 DNAJB7Q7Z6W7 309 aaPredicted RBP10.77□□□□□ -0.68
VAPB-204ENST00000475243 NXPE1Q8N323 547 aa10.77□□□□□ -0.68
VAPB-204ENST00000475243 TRPV1Q8NER1 839 aa10.77□□□□□ -0.68
VAPB-204ENST00000475243 RFKQ969G6 155 aa10.77□□□□□ -0.68
VAPB-204ENST00000475243 NUS1Q96E22 293 aa10.77□□□□□ -0.68
VAPB-204ENST00000475243 GPATCH1Q9BRR8 931 aaKnown RBP10.77□□□□□ -0.68
VAPB-204ENST00000475243 CHIAQ9BZP6 476 aa10.77□□□□□ -0.68
VAPB-204ENST00000475243 CARS2Q9HA77 564 aaKnown RBP10.77□□□□□ -0.68
VAPB-204ENST00000475243 PMF1-BGLAPU3KQ54 211 aa10.77□□□□□ -0.68
VAPB-204ENST00000475243 KERAO60938 352 aa10.77□□□□□ -0.68
VAPB-204ENST00000475243 CREB1P16220 341 aa10.77□□□□□ -0.68
VAPB-204ENST00000475243 PBX1P40424 430 aa10.77□□□□□ -0.68
VAPB-204ENST00000475243 GPR153Q6NV75 609 aa10.77□□□□□ -0.68
VAPB-204ENST00000475243 NUP54Q7Z3B4 507 aa10.77□□□□□ -0.68
VAPB-204ENST00000475243 CPNE8Q86YQ8 564 aa10.77□□□□□ -0.68
VAPB-204ENST00000475243 NKD2Q969F2 451 aaPredicted RBP10.77□□□□□ -0.68
VAPB-204ENST00000475243 IFT80Q9P2H3 777 aaPredicted RBP10.77□□□□□ -0.68
VAPB-204ENST00000475243 ZNF536O15090 1300 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 RAB2AP61019 212 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 AP1S1P61966 158 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 TSPAN5P62079 268 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 TMPRSS9Q7Z410 1059 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 C7orf57Q8NEG2 295 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 GATA5Q9BWX5 397 aaPredicted RBP10.77□□□□□ -0.69
VAPB-204ENST00000475243 CLDND1Q9NY35 253 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 GRIP1Q9Y3R0 1128 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 NR2E1Q9Y466 385 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 PDPK1O15530 556 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 SNHG28P0DPA3 235 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 ASPAP45381 313 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 SLC10A7Q0GE19 358 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 TOR1AIP1Q5JTV8 583 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 PHF19Q5T6S3 580 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 CNTD1Q8N815 330 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 HAVCR1Q96D42 359 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 SH3D21A4FU49 640 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 UBXN7O94888 489 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 ALPPL2P10696 532 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 ACVR2AP27037 513 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 SGCBQ16585 318 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 TBC1D25Q3MII6 688 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 CYP27C1Q4G0S4 372 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 IDNKQ5T6J7 187 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 PDE12Q6L8Q7 609 aaKnown RBP10.77□□□□□ -0.69
VAPB-204ENST00000475243 FAM46DQ8NEK8 389 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 TOP1MTQ969P6 601 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 DGCR14Q96DF8 476 aaKnown RBP10.77□□□□□ -0.69
VAPB-204ENST00000475243 ZBED6CLQ96FA7 236 aaPredicted RBP10.77□□□□□ -0.69
VAPB-204ENST00000475243 CCDC28BQ9BUN5 200 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 PCDHAC1Q9H158 963 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 CLCA3PQ9Y6N3 262 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 PAPSS2O95340 614 aaPredicted RBP10.77□□□□□ -0.69
VAPB-204ENST00000475243 PEX2P28328 305 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 FMO3P31513 532 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 CCKBRP32239 447 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 BICRALQ6AI39 1079 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 GDPD4Q6W3E5 623 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 ARMCX6Q7L4S7 300 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 NAXEQ8NCW5 288 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 CST11Q9H112 138 aa10.77□□□□□ -0.69
VAPB-204ENST00000475243 CCNKO75909 580 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 ARCN1P48444 511 aaKnown RBP10.76□□□□□ -0.69
VAPB-204ENST00000475243 AKR1D1P51857 326 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 RPS14P62263 151 aaKnown RBP10.76□□□□□ -0.69
VAPB-204ENST00000475243 ZFP3Q96NJ6 502 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 ZNF358Q9NW07 568 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 C1orf109Q9NX04 203 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 TRNAU1APQ9NX07 287 aaKnown RBP10.76□□□□□ -0.69
VAPB-204ENST00000475243 RWDD3Q9Y3V2 267 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 PCDHGA11Q9Y5H2 935 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 KIF1AQ12756 1690 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 NEMP2A6NFY4 417 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 PLK4O00444 970 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 LDB2O43679 373 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 ZBTB48P10074 688 aaPredicted RBP10.76□□□□□ -0.69
VAPB-204ENST00000475243 MPIP34949 423 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 SLC9B1Q4ZJI4 515 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 NODALQ96S42 347 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 SNX7Q9UNH6 387 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 ADAMDEC1O15204 470 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 CPNE3O75131 537 aaKnown RBP10.76□□□□□ -0.69
VAPB-204ENST00000475243 PGLSO95336 258 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 HLA-DQB2P05538 268 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 CREB5Q02930 508 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 HNRNPDQ14103 355 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms