RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 SCRG1O75711 98 aa10.83□□□□□ -0.68
CKS1B-206ENST00000474215 TMEM63AO94886 807 aa10.83□□□□□ -0.68
CKS1B-206ENST00000474215 RPN2P04844 631 aa10.83□□□□□ -0.68
CKS1B-206ENST00000474215 CHRM5P08912 532 aaPredicted RBP10.83□□□□□ -0.68
CKS1B-206ENST00000474215 FAM87AP0C7U9 286 aa10.83□□□□□ -0.68
CKS1B-206ENST00000474215 MSL3P1P0C860 447 aa10.83□□□□□ -0.68
CKS1B-206ENST00000474215 SFTPCP11686 197 aa10.83□□□□□ -0.68
CKS1B-206ENST00000474215 ST6GAL1P15907 406 aa10.83□□□□□ -0.68
CKS1B-206ENST00000474215 TCP1P17987 556 aaKnown RBP10.83□□□□□ -0.68
CKS1B-206ENST00000474215 PAMP19021 973 aa10.83□□□□□ -0.68
CKS1B-206ENST00000474215 RPS3P23396 243 aaKnown RBP eCLIP10.83□□□□□ -0.683e-8■■■■■ 30.3
CKS1B-206ENST00000474215 F8A1P23610 371 aa10.83□□□□□ -0.68
CKS1B-206ENST00000474215 FNTAP49354 379 aa10.83□□□□□ -0.68
CKS1B-206ENST00000474215 EIF3BP55884 814 aaKnown RBP10.83□□□□□ -0.68
CKS1B-206ENST00000474215 MC1RQ01726 317 aa10.83□□□□□ -0.68
CKS1B-206ENST00000474215 TMED2Q15363 201 aa10.83□□□□□ -0.68
CKS1B-206ENST00000474215 CRTC2Q53ET0 693 aaPredicted RBP10.83□□□□□ -0.68
CKS1B-206ENST00000474215 RNF187Q5TA31 235 aaPredicted RBP10.83□□□□□ -0.68
CKS1B-206ENST00000474215 KIAA0930Q6ICG6 404 aaPredicted RBP10.83□□□□□ -0.68
CKS1B-206ENST00000474215 NEPROQ6NW34 567 aa10.83□□□□□ -0.68
CKS1B-206ENST00000474215 BORAQ6PGQ7 559 aa10.83□□□□□ -0.68
CKS1B-206ENST00000474215 SPESP1Q6UW49 350 aa10.83□□□□□ -0.68
CKS1B-206ENST00000474215 UNC5DQ6UXZ4 953 aa10.83□□□□□ -0.68
CKS1B-206ENST00000474215 HOOK3Q86VS8 718 aa10.83□□□□□ -0.68
CKS1B-206ENST00000474215 GSDMBQ8TAX9 411 aa10.83□□□□□ -0.68
CKS1B-206ENST00000474215 STARD8Q92502 1023 aa10.83□□□□□ -0.68
CKS1B-206ENST00000474215 BIRC8Q96P09 236 aa10.83□□□□□ -0.68
CKS1B-206ENST00000474215 CATSPER2Q96P56 530 aa10.83□□□□□ -0.68
CKS1B-206ENST00000474215 OR2A14Q96R47 310 aa10.83□□□□□ -0.68
CKS1B-206ENST00000474215 SYTL2Q9HCH5 934 aa10.83□□□□□ -0.68
CKS1B-206ENST00000474215 LHX9Q9NQ69 397 aa10.83□□□□□ -0.68
CKS1B-206ENST00000474215 LATS2Q9NRM7 1088 aa10.83□□□□□ -0.68
CKS1B-206ENST00000474215 SPHK1Q9NYA1 384 aa10.83□□□□□ -0.68
CKS1B-206ENST00000474215 KCND3Q9UK17 655 aa10.83□□□□□ -0.68
CKS1B-206ENST00000474215 CROTQ9UKG9 612 aa10.83□□□□□ -0.68
CKS1B-206ENST00000474215 FAM237BA0A1B0GVD1 139 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 USP27XA6NNY8 438 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 GOLGA8KD6RF30 607 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 H3BMM5 538 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 GOLGA8TH3BQL2 631 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 TERTO14746 1132 aaKnown RBP10.82□□□□□ -0.68
CKS1B-206ENST00000474215 CPNE3O75131 537 aaKnown RBP10.82□□□□□ -0.68
CKS1B-206ENST00000474215 KATNA1O75449 491 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 ESR1P03372 595 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 PRKAR1AP10644 381 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 PVRP15151 417 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 UGT2B7P16662 529 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 TCN2P20062 427 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 FMO4P31512 558 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 ADARP55265 1226 aaKnown RBP10.82□□□□□ -0.68
CKS1B-206ENST00000474215 CDC20Q12834 499 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 DHX34Q14147 1143 aaKnown RBP10.82□□□□□ -0.68
CKS1B-206ENST00000474215 KIR2DS3Q14952 304 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 PPP1R7Q15435 360 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 KYNUQ16719 465 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 TYSND1Q2T9J0 566 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 ANKRD20A4Q4UJ75 823 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 PLEKHS1Q5SXH7 462 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 TTC23LQ6PF05 361 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 OTOAQ7RTW8 1153 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 TMEM135Q86UB9 458 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 TMEM126BQ8IUX1 230 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 PPIL6Q8IXY8 311 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 NAT8LQ8N9F0 302 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 CFAP61Q8NHU2 1237 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 LPGAT1Q92604 370 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 TCTN2Q96GX1 697 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 SERPINB12Q96P63 405 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 TRIM56Q9BRZ2 755 aaKnown RBP10.82□□□□□ -0.68
CKS1B-206ENST00000474215 TWSG1Q9GZX9 223 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 KLHL25Q9H0H3 589 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 AKIRIN1Q9H9L7 192 aaPredicted RBP10.82□□□□□ -0.68
CKS1B-206ENST00000474215 FANCEQ9HB96 536 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 SERTAD3Q9UJW9 196 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 PLAGL1Q9UM63 463 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 PCDHB3Q9Y5E6 796 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 PCDHGA6Q9Y5G7 932 aa10.82□□□□□ -0.68
CKS1B-206ENST00000474215 ZCWPW2A0A1B0GU75 182 aa10.81□□□□□ -0.68
CKS1B-206ENST00000474215 ISM1B1AKI9 464 aa10.81□□□□□ -0.68
CKS1B-206ENST00000474215 C21orf140B9A014 251 aa10.81□□□□□ -0.68
CKS1B-206ENST00000474215 TMEM150CB9EJG8 249 aa10.81□□□□□ -0.68
CKS1B-206ENST00000474215 S1PR4O95977 384 aa10.81□□□□□ -0.68
CKS1B-206ENST00000474215 RECKO95980 971 aa10.81□□□□□ -0.68
CKS1B-206ENST00000474215 KLK3P07288 261 aaPredicted RBP10.81□□□□□ -0.68
CKS1B-206ENST00000474215 OGNP20774 298 aaKnown RBP10.81□□□□□ -0.68
CKS1B-206ENST00000474215 MAGEA3P43357 314 aa10.81□□□□□ -0.68
CKS1B-206ENST00000474215 CCR10P46092 362 aa10.81□□□□□ -0.68
CKS1B-206ENST00000474215 RAB28P51157 221 aa10.81□□□□□ -0.68
CKS1B-206ENST00000474215 GNG11P61952 73 aa10.81□□□□□ -0.68
CKS1B-206ENST00000474215 DNASE1L3Q13609 305 aa10.81□□□□□ -0.68
CKS1B-206ENST00000474215 GRB7Q14451 532 aa10.81□□□□□ -0.68
CKS1B-206ENST00000474215 CTSL3PQ5NE16 218 aa10.81□□□□□ -0.68
CKS1B-206ENST00000474215 C16orf46Q6P387 395 aa10.81□□□□□ -0.68
CKS1B-206ENST00000474215 FAM199XQ6PEV8 388 aaPredicted RBP10.81□□□□□ -0.68
CKS1B-206ENST00000474215 CDHR3Q6ZTQ4 885 aa10.81□□□□□ -0.68
CKS1B-206ENST00000474215 CENPUQ71F23 418 aa10.81□□□□□ -0.68
CKS1B-206ENST00000474215 ZNF605Q86T29 641 aa10.81□□□□□ -0.68
CKS1B-206ENST00000474215 TRIM73Q86UV7 250 aa10.81□□□□□ -0.68
CKS1B-206ENST00000474215 CILP2Q8IUL8 1156 aa10.81□□□□□ -0.68
CKS1B-206ENST00000474215 DCUN1D3Q8IWE4 304 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms