RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 SLC1A2P43004 574 aa13.79□□□□□ -0.2
VAMP4-203ENST00000474047 ACY1Q03154 408 aa13.79□□□□□ -0.2
VAMP4-203ENST00000474047 CKAP4Q07065 602 aaKnown RBP13.79□□□□□ -0.2
VAMP4-203ENST00000474047 KCNAB1Q14722 419 aa13.79□□□□□ -0.2
VAMP4-203ENST00000474047 MSS51Q4VC12 460 aa13.79□□□□□ -0.2
VAMP4-203ENST00000474047 ARHGAP40Q5TG30 622 aa13.79□□□□□ -0.2
VAMP4-203ENST00000474047 UNC5DQ6UXZ4 953 aa13.79□□□□□ -0.2
VAMP4-203ENST00000474047 UNC5AQ6ZN44 842 aa13.79□□□□□ -0.2
VAMP4-203ENST00000474047 GPR155Q7Z3F1 870 aa13.79□□□□□ -0.2
VAMP4-203ENST00000474047 PPP1R3BQ86XI6 285 aa13.79□□□□□ -0.2
VAMP4-203ENST00000474047 CACNA2D3Q8IZS8 1091 aa13.79□□□□□ -0.2
VAMP4-203ENST00000474047 CARFQ8N187 725 aa13.79□□□□□ -0.2
VAMP4-203ENST00000474047 RAB42Q8N4Z0 105 aa13.79□□□□□ -0.2
VAMP4-203ENST00000474047 ZBTB2Q8N680 514 aa13.79□□□□□ -0.2
VAMP4-203ENST00000474047 LRRC39Q96DD0 335 aa13.79□□□□□ -0.2
VAMP4-203ENST00000474047 ULBP3Q9BZM4 244 aa13.79□□□□□ -0.2
VAMP4-203ENST00000474047 DPH5Q9H2P9 285 aa13.79□□□□□ -0.2
VAMP4-203ENST00000474047 C1GALT1Q9NS00 363 aa13.79□□□□□ -0.2
VAMP4-203ENST00000474047 SIDT1Q9NXL6 827 aaKnown RBP13.79□□□□□ -0.2
VAMP4-203ENST00000474047 ACTR10Q9NZ32 417 aa13.79□□□□□ -0.2
VAMP4-203ENST00000474047 POMT2Q9UKY4 750 aa13.79□□□□□ -0.2
VAMP4-203ENST00000474047 SLC39A10Q9ULF5 831 aa13.79□□□□□ -0.2
VAMP4-203ENST00000474047 ICKQ9UPZ9 632 aa13.79□□□□□ -0.2
VAMP4-203ENST00000474047 CHMP2BQ9UQN3 213 aa13.79□□□□□ -0.2
VAMP4-203ENST00000474047 CDYLQ9Y232 598 aa13.79□□□□□ -0.2
VAMP4-203ENST00000474047 UTP11Q9Y3A2 253 aaKnown RBP13.79□□□□□ -0.2
VAMP4-203ENST00000474047 SLC9B1P1A6NJY1 282 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 ISM1B1AKI9 464 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 STK17BO94768 372 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 EBLN1P0CF75 366 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 RPL21P46778 160 aaKnown RBP13.78□□□□□ -0.2
VAMP4-203ENST00000474047 VAC14Q08AM6 782 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 TUBB3Q13509 450 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 TTLL9Q3SXZ7 439 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 ZNF789Q5FWF6 425 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 FBXO38Q6PIJ6 1188 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 DCUN1D3Q8IWE4 304 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 ADGRF3Q8IZF5 1079 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 UNC5BQ8IZJ1 945 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 ZSCAN1Q8NBB4 408 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 MAGEC3Q8TD91 643 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 SLC41A2Q96JW4 573 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 PWWP2AQ96N64 755 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 NRTNQ99748 197 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 ERP44Q9BS26 406 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 FANCEQ9HB96 536 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 OR6C2Q9NZP2 312 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 SEMA5BQ9P283 1151 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 COMMD10Q9Y6G5 202 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 ASPMQ8IZT6 3477 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.78□□□□□ -0.2
VAMP4-203ENST00000474047 RAD1O60671 282 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 F7P08709 466 aaPredicted RBP13.78□□□□□ -0.2
VAMP4-203ENST00000474047 CHRM5P08912 532 aaPredicted RBP13.78□□□□□ -0.2
VAMP4-203ENST00000474047 FOLR1P15328 257 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 MPP1Q00013 466 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 PDIA2Q13087 525 aaKnown RBP13.78□□□□□ -0.2
VAMP4-203ENST00000474047 CNSTQ6PJW8 725 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 VASH2Q86V25 355 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 BPHLQ86WA6 291 aaPredicted RBP13.78□□□□□ -0.2
VAMP4-203ENST00000474047 ANKMY2Q8IV38 441 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 NLGN4XQ8N0W4 816 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 NLGN4YQ8NFZ3 816 aaPredicted RBP13.78□□□□□ -0.2
VAMP4-203ENST00000474047 N4BP2L2Q92802 583 aaPredicted RBP13.78□□□□□ -0.2
VAMP4-203ENST00000474047 NKD1Q969G9 470 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 PPM1MQ96MI6 270 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 FGF21Q9NSA1 209 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 CIDEBQ9UHD4 219 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 LNPEPQ9UIQ6 1025 aa13.78□□□□□ -0.2
VAMP4-203ENST00000474047 RAD51CO43502 376 aa13.77□□□□□ -0.21
VAMP4-203ENST00000474047 VPS26AO75436 327 aa13.77□□□□□ -0.21
VAMP4-203ENST00000474047 HAUS5O94927 633 aa13.77□□□□□ -0.21
VAMP4-203ENST00000474047 MAP4P27816 1152 aaKnown RBP13.77□□□□□ -0.21
VAMP4-203ENST00000474047 CCNFP41002 786 aa13.77□□□□□ -0.21
VAMP4-203ENST00000474047 CARSP49589 748 aaKnown RBP13.77□□□□□ -0.21
VAMP4-203ENST00000474047 RAB28P51157 221 aa13.77□□□□□ -0.21
VAMP4-203ENST00000474047 SPESP1Q6UW49 350 aa13.77□□□□□ -0.21
VAMP4-203ENST00000474047 DTX1Q86Y01 620 aa13.77□□□□□ -0.21
VAMP4-203ENST00000474047 IGDCC3Q8IVU1 814 aa13.77□□□□□ -0.21
VAMP4-203ENST00000474047 D2HGDHQ8N465 521 aa13.77□□□□□ -0.21
VAMP4-203ENST00000474047 KIAA1143Q96AT1 154 aaPredicted RBP13.77□□□□□ -0.21
VAMP4-203ENST00000474047 RAD51AP1Q96B01 352 aa13.77□□□□□ -0.21
VAMP4-203ENST00000474047 RNF31Q96EP0 1072 aa13.77□□□□□ -0.21
VAMP4-203ENST00000474047 CERS2Q96G23 380 aa13.77□□□□□ -0.21
VAMP4-203ENST00000474047 RAB11FIP5Q9BXF6 653 aa13.77□□□□□ -0.21
VAMP4-203ENST00000474047 KLHL25Q9H0H3 589 aa13.77□□□□□ -0.21
VAMP4-203ENST00000474047 RAB17Q9H0T7 212 aa13.77□□□□□ -0.21
VAMP4-203ENST00000474047 PRORYQ9H606 182 aa13.77□□□□□ -0.21
VAMP4-203ENST00000474047 CDC23Q9UJX2 597 aa13.77□□□□□ -0.21
VAMP4-203ENST00000474047 SDK2Q58EX2 2172 aa13.77□□□□□ -0.21
VAMP4-203ENST00000474047 AHCTF1Q8WYP5 2266 aa13.77□□□□□ -0.21
VAMP4-203ENST00000474047 SPAG6O75602 509 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 KIAA0754O94854 1291 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 FGF5P12034 268 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 TUBB4BP68371 445 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 TUBB2AQ13885 445 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 GPR19Q15760 415 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 KYNUQ16719 465 aa13.76□□□□□ -0.21
VAMP4-203ENST00000474047 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.76□□□□□ -0.21
VAMP4-203ENST00000474047 UGT3A1Q6NUS8 523 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms