RNA–Protein interactions for RNA: ENST00000474036.1

FN1-219, Transcript of fibronectin 1, human

TSL 2

Gene FN1, Length 1,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-219	ENST00000474036	VKORC1	Q9BQB6	163 aa		5.21	□□□□□ -1.58
FN1-219	ENST00000474036	TMEM121	Q9BTD3	319 aa		5.21	□□□□□ -1.58
FN1-219	ENST00000474036	CALN1	Q9BXU9	219 aa		5.21	□□□□□ -1.58
FN1-219	ENST00000474036	ROPN1B	Q9BZX4	212 aa	Predicted RBP	5.21	□□□□□ -1.58
FN1-219	ENST00000474036	TSPYL1	Q9H0U9	437 aa		5.21	□□□□□ -1.58
FN1-219	ENST00000474036	VPS37B	Q9H9H4	285 aa		5.21	□□□□□ -1.58
FN1-219	ENST00000474036	ROPN1	Q9HAT0	212 aa	Predicted RBP	5.21	□□□□□ -1.58
FN1-219	ENST00000474036	MLXIPL	Q9NP71	852 aa		5.21	□□□□□ -1.58
FN1-219	ENST00000474036	KCNK9	Q9NPC2	374 aa		5.21	□□□□□ -1.58
FN1-219	ENST00000474036	INTS9	Q9NV88	658 aa	Known RBP	5.21	□□□□□ -1.58
FN1-219	ENST00000474036	ASNSD1	Q9NWL6	643 aa		5.21	□□□□□ -1.58
FN1-219	ENST00000474036	SIDT1	Q9NXL6	827 aa	Known RBP	5.21	□□□□□ -1.58
FN1-219	ENST00000474036	WDR35	Q9P2L0	1181 aa		5.21	□□□□□ -1.58
FN1-219	ENST00000474036	TBK1	Q9UHD2	729 aa		5.21	□□□□□ -1.58
FN1-219	ENST00000474036	TSPAN16	Q9UKR8	245 aa		5.21	□□□□□ -1.58
FN1-219	ENST00000474036	CDYL	Q9Y232	598 aa		5.21	□□□□□ -1.58
FN1-219	ENST00000474036	MTO1	Q9Y2Z2	717 aa	Known RBP	5.21	□□□□□ -1.58
FN1-219	ENST00000474036	C2CD2	Q9Y426	696 aa		5.21	□□□□□ -1.58
FN1-219	ENST00000474036	SNX9	Q9Y5X1	595 aa		5.21	□□□□□ -1.58
FN1-219	ENST00000474036	POLQ	O75417	2590 aa		5.21	□□□□□ -1.58
FN1-219	ENST00000474036	CENPE	Q02224	2701 aa		5.21	□□□□□ -1.58
FN1-219	ENST00000474036	TLN1	Q9Y490	2541 aa	Known RBP	5.2	□□□□□ -1.58
FN1-219	ENST00000474036		A0A1B0GVT2	93 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	EXOC1L	A0A1B0GW35	172 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	TMEM120B	A0PK00	339 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	MTMR11	A4FU01	709 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036		A8MXQ7	604 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	POC1B-GALNT4	F8VUJ3	575 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036		H7C0C1	242 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	SYN3	O14994	580 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	MCF2L	O15068	1137 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	PRPSAP2	O60256	369 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	ATP2C2	O75185	946 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	RNF8	O76064	485 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	APOD	P05090	189 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	VIM	P08670	466 aa	Known RBP	5.2	□□□□□ -1.58
FN1-219	ENST00000474036	CCDC130	P13994	396 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	HOXB2	P14652	356 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	TYR	P14679	529 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	CREB1	P16220	341 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	PDGFRA	P16234	1089 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	RPL22	P35268	128 aa	Known RBP	5.2	□□□□□ -1.58
FN1-219	ENST00000474036	OPRD1	P41143	372 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	GPD2	P43304	727 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	MMP13	P45452	471 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	GABRB2	P47870	512 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	ATP5O	P48047	213 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	CDH6	P55285	790 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	YWHAH	Q04917	246 aa	Predicted RBP	5.2	□□□□□ -1.58
FN1-219	ENST00000474036	GAD2	Q05329	585 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	INCA1	Q0VD86	236 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	PDIA2	Q13087	525 aa	Known RBP	5.2	□□□□□ -1.58
FN1-219	ENST00000474036	IFT88	Q13099	833 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	FASTKD3	Q14CZ7	662 aa	Known RBP	5.2	□□□□□ -1.58
FN1-219	ENST00000474036	OASL	Q15646	514 aa	Known RBP	5.2	□□□□□ -1.58
FN1-219	ENST00000474036	GEN1	Q17RS7	908 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	TBC1D25	Q3MII6	688 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	SPDYE7P	Q495Y7	208 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	SLC39A12	Q504Y0	691 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	WDR45B	Q5MNZ6	344 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	ERMARD	Q5T6L9	678 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	RNASEH2B	Q5TBB1	312 aa	Known RBP	5.2	□□□□□ -1.58
FN1-219	ENST00000474036	THEMIS2	Q5TEJ8	643 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	SDHAF4	Q5VUM1	108 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	ANKRD22	Q5VYY1	191 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	DARS2	Q6PI48	645 aa	Known RBP	5.2	□□□□□ -1.58
FN1-219	ENST00000474036	LCLAT1	Q6UWP7	414 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	TAOK1	Q7L7X3	1001 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	EXOC3L1	Q86VI1	746 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	TMPRSS12	Q86WS5	348 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	PPP1R3B	Q86XI6	285 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	UNC45B	Q8IWX7	931 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	SRRM1	Q8IYB3	904 aa	Known RBP	5.2	□□□□□ -1.58
FN1-219	ENST00000474036	CACNA2D3	Q8IZS8	1091 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	OTUD6B	Q8N6M0	293 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	FAM71D	Q8N9W8	422 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	PDPR	Q8NCN5	879 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	ZNF248	Q8NDW4	579 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	APPL2	Q8NEU8	664 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	OR6B3	Q8NGW1	331 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	GDAP1	Q8TB36	358 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	OSCP1	Q8WVF1	389 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	DYDC1	Q8WWB3	177 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	KCNE4	Q8WWG9	221 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	PRCC	Q92733	491 aa	Predicted RBP	5.2	□□□□□ -1.58
FN1-219	ENST00000474036	ARHGEF2	Q92974	986 aa	Known RBP	5.2	□□□□□ -1.58
FN1-219	ENST00000474036	FUBP1	Q96AE4	644 aa	Known RBP	5.2	□□□□□ -1.58
FN1-219	ENST00000474036	CHMP6	Q96FZ7	201 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	BOD1	Q96IK1	185 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	SERPINB12	Q96P63	405 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	PRMT1	Q99873	361 aa	Known RBP	5.2	□□□□□ -1.58
FN1-219	ENST00000474036	CCDC77	Q9BR77	488 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	CNPY3	Q9BT09	278 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	MAK16	Q9BXY0	300 aa	Known RBP	5.2	□□□□□ -1.58
FN1-219	ENST00000474036	MIS12	Q9H081	205 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	LINC00597	Q9H2U6	94 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	SNX25	Q9H3E2	840 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	DPEP3	Q9H4B8	488 aa		5.2	□□□□□ -1.58
FN1-219	ENST00000474036	FAM124B	Q9H5Z6	455 aa	Predicted RBP	5.2	□□□□□ -1.58
FN1-219	ENST00000474036	UNKL	Q9H9P5	680 aa	Known RBP	5.2	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms