RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 ACSBG2Q5FVE4 666 aa13.35□□□□□ -0.27
USF1-205ENST00000473969 DCAF12Q5T6F0 453 aa13.35□□□□□ -0.27
USF1-205ENST00000473969 LRRC8EQ6NSJ5 796 aa13.35□□□□□ -0.27
USF1-205ENST00000473969 FAM45BPQ6NSW5 357 aa13.35□□□□□ -0.27
USF1-205ENST00000473969 ZNF549Q6P9A3 640 aa13.35□□□□□ -0.27
USF1-205ENST00000473969 ZDHHC24Q6UX98 284 aa13.35□□□□□ -0.27
USF1-205ENST00000473969 PRSS42Q7Z5A4 293 aa13.35□□□□□ -0.27
USF1-205ENST00000473969 STRA8Q7Z7C7 330 aa13.35□□□□□ -0.27
USF1-205ENST00000473969 SLC26A11Q86WA9 606 aa13.35□□□□□ -0.27
USF1-205ENST00000473969 PROSER1Q86XN7 944 aa13.35□□□□□ -0.27
USF1-205ENST00000473969 KMT5CQ86Y97 462 aa13.35□□□□□ -0.27
USF1-205ENST00000473969 CARFQ8N187 725 aa13.35□□□□□ -0.27
USF1-205ENST00000473969 FAM45AQ8TCE6 357 aa13.35□□□□□ -0.27
USF1-205ENST00000473969 SEC14L1Q92503 715 aa13.35□□□□□ -0.27
USF1-205ENST00000473969 USP7Q93009 1102 aa13.35□□□□□ -0.27
USF1-205ENST00000473969 RAD51AP1Q96B01 352 aa13.35□□□□□ -0.27
USF1-205ENST00000473969 PRR11Q96HE9 360 aaPredicted RBP13.35□□□□□ -0.27
USF1-205ENST00000473969 NDNQ99608 321 aa13.35□□□□□ -0.27
USF1-205ENST00000473969 RAB11FIP5Q9BXF6 653 aa13.35□□□□□ -0.27
USF1-205ENST00000473969 ASPSCR1Q9BZE9 553 aa13.35□□□□□ -0.27
USF1-205ENST00000473969 ZNF768Q9H5H4 540 aaKnown RBP13.35□□□□□ -0.27
USF1-205ENST00000473969 WDR70Q9NW82 654 aa13.35□□□□□ -0.27
USF1-205ENST00000473969 MOCS1Q9NZB8 636 aa13.35□□□□□ -0.27
USF1-205ENST00000473969 OR6C2Q9NZP2 312 aa13.35□□□□□ -0.27
USF1-205ENST00000473969 LNPEPQ9UIQ6 1025 aa13.35□□□□□ -0.27
USF1-205ENST00000473969 PCDHB11Q9Y5F2 797 aa13.35□□□□□ -0.27
USF1-205ENST00000473969 PCDHGA7Q9Y5G6 932 aa13.35□□□□□ -0.27
USF1-205ENST00000473969 CEP295Q9C0D2 2601 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 PABPN1LA6NDY0 278 aaKnown RBP13.34□□□□□ -0.27
USF1-205ENST00000473969 B4E171 279 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 BTN3A1O00481 513 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 NVLO15381 856 aaKnown RBP13.34□□□□□ -0.27
USF1-205ENST00000473969 KIF1CO43896 1103 aaKnown RBP13.34□□□□□ -0.27
USF1-205ENST00000473969 KRT37O76014 449 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 MPC1LP0DKB6 136 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 FGF3P11487 239 aaPredicted RBP13.34□□□□□ -0.27
USF1-205ENST00000473969 SLC5A2P31639 672 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 STX2P32856 288 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 TSPAN7P41732 249 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 RAB28P51157 221 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 SLC12A2P55011 1212 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 MC2RQ01718 297 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 TMTC4Q5T4D3 741 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 CEACAM20Q6UY09 585 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 NEK10Q6ZWH5 1172 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 IFT20Q8IY31 132 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 ZNF248Q8NDW4 579 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 SLC22A18Q96BI1 424 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 ELMO2Q96JJ3 720 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 DCBLD2Q96PD2 775 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 TEFMQ96QE5 360 aaKnown RBP13.34□□□□□ -0.27
USF1-205ENST00000473969 MAP3K3Q99759 626 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 ZPBPQ9BS86 351 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 B3GNT4Q9C0J1 378 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 PLAC1Q9HBJ0 212 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 ASCL3Q9NQ33 180 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 C1GALT1Q9NS00 363 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 OCIAD1Q9NX40 245 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 SOHLH2Q9NX45 425 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 ACTR10Q9NZ32 417 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 SLC17A6Q9P2U8 582 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 GALPQ9UBC7 116 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 DMGDHQ9UI17 866 aaKnown RBP13.34□□□□□ -0.27
USF1-205ENST00000473969 PLAGL1Q9UM63 463 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 ICKQ9UPZ9 632 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 RAXQ9Y2V3 346 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 VWA7Q9Y334 891 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 PIKFYVEQ9Y2I7 2098 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 BPTFQ12830 3046 aa13.34□□□□□ -0.27
USF1-205ENST00000473969 PMS2P1A4D2B8 440 aa13.33□□□□□ -0.28
USF1-205ENST00000473969 ZNF839A8K0R7 811 aa13.33□□□□□ -0.28
USF1-205ENST00000473969 CDRT15L2A8MXV6 281 aa13.33□□□□□ -0.28
USF1-205ENST00000473969 ISM1B1AKI9 464 aa13.33□□□□□ -0.28
USF1-205ENST00000473969 EIF3FO00303 357 aaPredicted RBP13.33□□□□□ -0.28
USF1-205ENST00000473969 BTN3A3O00478 584 aa13.33□□□□□ -0.28
USF1-205ENST00000473969 POLR1CO15160 346 aaPredicted RBP13.33□□□□□ -0.28
USF1-205ENST00000473969 ZBTB14O43829 449 aa13.33□□□□□ -0.28
USF1-205ENST00000473969 C1orf105O95561 183 aa13.33□□□□□ -0.28
USF1-205ENST00000473969 ZBTB11O95625 1053 aaPredicted RBP13.33□□□□□ -0.28
USF1-205ENST00000473969 CHRM5P08912 532 aaPredicted RBP13.33□□□□□ -0.28
USF1-205ENST00000473969 SAT1P21673 171 aa13.33□□□□□ -0.28
USF1-205ENST00000473969 MCM3P25205 808 aa13.33□□□□□ -0.28
USF1-205ENST00000473969 CD82P27701 267 aa13.33□□□□□ -0.28
USF1-205ENST00000473969 GABRB3P28472 473 aa13.33□□□□□ -0.28
USF1-205ENST00000473969 PRDX3P30048 256 aaKnown RBP13.33□□□□□ -0.28
USF1-205ENST00000473969 PHBP35232 272 aa13.33□□□□□ -0.28
USF1-205ENST00000473969 ETV5P41161 510 aa13.33□□□□□ -0.28
USF1-205ENST00000473969 ABCG1P45844 678 aa13.33□□□□□ -0.28
USF1-205ENST00000473969 ACY1Q03154 408 aa13.33□□□□□ -0.28
USF1-205ENST00000473969 CUL1Q13616 776 aa13.33□□□□□ -0.28
USF1-205ENST00000473969 GBX1Q14549 363 aa13.33□□□□□ -0.28
USF1-205ENST00000473969 KYNUQ16719 465 aa13.33□□□□□ -0.28
USF1-205ENST00000473969 HECTD2Q5U5R9 776 aa13.33□□□□□ -0.28
USF1-205ENST00000473969 CYS1Q717R9 158 aa13.33□□□□□ -0.28
USF1-205ENST00000473969 CLEC14AQ86T13 490 aa13.33□□□□□ -0.28
USF1-205ENST00000473969 CTAGE3PQ8IX95 158 aa13.33□□□□□ -0.28
USF1-205ENST00000473969 MYO1HQ8N1T3 1032 aa13.33□□□□□ -0.28
USF1-205ENST00000473969 SNIP1Q8TAD8 396 aaKnown RBP13.33□□□□□ -0.28
USF1-205ENST00000473969 CD200R1Q8TD46 325 aa13.33□□□□□ -0.28
USF1-205ENST00000473969 KLHL6Q8WZ60 621 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms