RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 TAF11Q15544 211 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 C2orf68Q2NKX9 166 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 RABL6Q3YEC7 729 aaPredicted RBP1.54□□□□□ -2.16
CCDC39-203ENST00000473854 FHL5Q5TD97 284 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 RAD9BQ6WBX8 426 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 COPS6Q7L5N1 327 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 TADA2BQ86TJ2 420 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 MYLK4Q86YV6 388 aaPredicted RBP1.54□□□□□ -2.16
CCDC39-203ENST00000473854 RPAP2Q8IXW5 612 aaPredicted RBP1.54□□□□□ -2.16
CCDC39-203ENST00000473854 SLC35F3Q8IY50 421 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 TTC5Q8N0Z6 440 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 C17orf47Q8NEP4 570 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 PRSS33Q8NF86 280 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 PIGBQ92521 554 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 ORAI1Q96D31 301 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 PRAC1Q96KF2 57 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 FAM167BQ9BTA0 163 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 ISCA1Q9BUE6 129 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 CLEC7AQ9BXN2 247 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 LRRCC1Q9C099 1032 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 WWTR1Q9GZV5 400 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 SIL1Q9H173 461 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 HYPKQ9NX55 129 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 DBF4Q9UBU7 674 aaPredicted RBP1.54□□□□□ -2.16
CCDC39-203ENST00000473854 DBNLQ9UJU6 430 aaKnown RBP1.54□□□□□ -2.16
CCDC39-203ENST00000473854 FBXL2Q9UKC9 423 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 EXO1Q9UQ84 846 aaKnown RBP1.54□□□□□ -2.16
CCDC39-203ENST00000473854 KLHL20Q9Y2M5 609 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 COMMD10Q9Y6G5 202 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 RAD50Q92878 1312 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 RFX7Q2KHR2 1363 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 CARMIL3Q8ND23 1372 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 PALLDQ8WX93 1383 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 A0A0G2JMZ2 1700 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 LRRC37A2A6NM11 1700 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 USP34Q70CQ2 3546 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 TRIP11Q15643 1979 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 HCFC1P51610 2035 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 A0A0D9SFI3 127 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 EPM2AB3EWF7 344 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 SOCS3O14543 225 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 HS3ST1O14792 307 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 PIP5K1CO60331 668 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 HMMRO75330 724 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 FRAT2O75474 233 aaPredicted RBP1.53□□□□□ -2.16
CCDC39-203ENST00000473854 SURF6O75683 361 aaKnown RBP1.53□□□□□ -2.16
CCDC39-203ENST00000473854 NXPH2O95156 264 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 DUS4LO95620 317 aaKnown RBP1.53□□□□□ -2.16
CCDC39-203ENST00000473854 MT-CYBP00156 380 aaPredicted RBP1.53□□□□□ -2.16
CCDC39-203ENST00000473854 ANK1P16157 1881 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 CHMLP26374 656 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 POU1F1P28069 291 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 COL4A5P29400 1685 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 ADORA1P30542 326 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 SHMT1P34896 483 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 RANBP2P49792 3224 aaKnown RBP1.53□□□□□ -2.16
CCDC39-203ENST00000473854 SORDQ00796 357 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 HNRNPDQ14103 355 aaKnown RBP1.53□□□□□ -2.16
CCDC39-203ENST00000473854 POSTNQ15063 836 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 PPP2R5BQ15173 497 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 ANKRD1Q15327 319 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 HSP90AB3PQ58FF7 597 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 ZNF667Q5HYK9 610 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 OLFML2AQ68BL7 652 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 PSRC1Q6PGN9 363 aaPredicted RBP1.53□□□□□ -2.16
CCDC39-203ENST00000473854 NHLRC1Q6VVB1 395 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 MAP3K15Q6ZN16 1313 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 SMIM5Q71RC9 77 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 ATG9AQ7Z3C6 839 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 ADGRG6Q86SQ4 1221 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 ZNF589Q86UQ0 364 aaPredicted RBP1.53□□□□□ -2.16
CCDC39-203ENST00000473854 AACSQ86V21 672 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 TDRPQ86YL5 185 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 SUGP1Q8IWZ8 645 aaKnown RBP1.53□□□□□ -2.16
CCDC39-203ENST00000473854 DHX40Q8IX18 779 aaKnown RBP1.53□□□□□ -2.16
CCDC39-203ENST00000473854 RAB42Q8N4Z0 105 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 ZBTB2Q8N680 514 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 MYCT1Q8N699 235 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 ENAHQ8N8S7 591 aaPredicted RBP1.53□□□□□ -2.16
CCDC39-203ENST00000473854 HMGCLL1Q8TB92 370 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 SNX21Q969T3 373 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 RILPL2Q969X0 211 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 TMEM143Q96AN5 459 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 KIF1BPQ96EK5 621 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 USP28Q96RU2 1077 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 EYA3Q99504 573 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 PITPNM3Q9BZ71 974 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 LSG1Q9H089 658 aaKnown RBP1.53□□□□□ -2.16
CCDC39-203ENST00000473854 TAOK3Q9H2K8 898 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 CHMP4BQ9H444 224 aaKnown RBP1.53□□□□□ -2.16
CCDC39-203ENST00000473854 KAT14Q9H8E8 782 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 PPCSQ9HAB8 311 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 NOD2Q9HC29 1040 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 SLC38A7Q9NVC3 462 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 TMOD3Q9NYL9 352 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 ERAP1Q9NZ08 941 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 C9orf78Q9NZ63 289 aaPredicted RBP1.53□□□□□ -2.16
CCDC39-203ENST00000473854 COQ3Q9NZJ6 369 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 NUDT4Q9NZJ9 180 aa1.53□□□□□ -2.16
CCDC39-203ENST00000473854 KIAA1456Q9P272 454 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms