RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 MC4RP32245 332 aa6□□□□□ -1.45
HERC4-209ENST00000473533 MAGEA10P43363 369 aaPredicted RBP6□□□□□ -1.45
HERC4-209ENST00000473533 APLP1P51693 650 aa6□□□□□ -1.45
HERC4-209ENST00000473533 ERVPABLB-1P60509 514 aa6□□□□□ -1.45
HERC4-209ENST00000473533 PRKCDQ05655 676 aa6□□□□□ -1.45
HERC4-209ENST00000473533 AQP6Q13520 282 aa6□□□□□ -1.45
HERC4-209ENST00000473533 GALNT3Q14435 633 aa6□□□□□ -1.45
HERC4-209ENST00000473533 ZRANB3Q5FWF4 1079 aa6□□□□□ -1.45
HERC4-209ENST00000473533 HABP4Q5JVS0 413 aaKnown RBP6□□□□□ -1.45
HERC4-209ENST00000473533 PTRHD1Q6GMV3 140 aaKnown RBP6□□□□□ -1.45
HERC4-209ENST00000473533 TRIM46Q7Z4K8 759 aa6□□□□□ -1.45
HERC4-209ENST00000473533 SERPINA11Q86U17 422 aa6□□□□□ -1.45
HERC4-209ENST00000473533 OR4F6Q8NGB9 312 aa6□□□□□ -1.45
HERC4-209ENST00000473533 SCAMP5Q8TAC9 235 aa6□□□□□ -1.45
HERC4-209ENST00000473533 CD200R1Q8TD46 325 aa6□□□□□ -1.45
HERC4-209ENST00000473533 NELL1Q92832 810 aa6□□□□□ -1.45
HERC4-209ENST00000473533 LGALS12Q96DT0 336 aa6□□□□□ -1.45
HERC4-209ENST00000473533 TEX37Q96LM6 180 aa6□□□□□ -1.45
HERC4-209ENST00000473533 RIBC2Q9H4K1 309 aa6□□□□□ -1.45
HERC4-209ENST00000473533 PIF1Q9H611 641 aa6□□□□□ -1.45
HERC4-209ENST00000473533 IPPKQ9H8X2 491 aa6□□□□□ -1.45
HERC4-209ENST00000473533 RDH14Q9HBH5 336 aa6□□□□□ -1.45
HERC4-209ENST00000473533 WWOXQ9NZC7 414 aa6□□□□□ -1.45
HERC4-209ENST00000473533 MARCH2Q9P0N8 246 aa6□□□□□ -1.45
HERC4-209ENST00000473533 CRNNQ9UBG3 495 aaPredicted RBP6□□□□□ -1.45
HERC4-209ENST00000473533 KCTD3Q9Y597 815 aa6□□□□□ -1.45
HERC4-209ENST00000473533 FFAR2O15552 330 aa6□□□□□ -1.45
HERC4-209ENST00000473533 INMTO95050 263 aa6□□□□□ -1.45
HERC4-209ENST00000473533 SERPINA1P01009 418 aa6□□□□□ -1.45
HERC4-209ENST00000473533 FABP3P05413 133 aa6□□□□□ -1.45
HERC4-209ENST00000473533 CBSLP0DN79 551 aa6□□□□□ -1.45
HERC4-209ENST00000473533 EPB42P16452 691 aa6□□□□□ -1.45
HERC4-209ENST00000473533 CBSP35520 551 aa6□□□□□ -1.45
HERC4-209ENST00000473533 KRT20P35900 424 aa6□□□□□ -1.45
HERC4-209ENST00000473533 SLC11A2P49281 568 aa6□□□□□ -1.45
HERC4-209ENST00000473533 ALDH7A1P49419 539 aaKnown RBP6□□□□□ -1.45
HERC4-209ENST00000473533 PRIM2P49643 509 aa6□□□□□ -1.45
HERC4-209ENST00000473533 CDH4P55283 916 aa6□□□□□ -1.45
HERC4-209ENST00000473533 PURAQ00577 322 aaKnown RBP6□□□□□ -1.45
HERC4-209ENST00000473533 TBCEQ15813 527 aaPredicted RBP6□□□□□ -1.45
HERC4-209ENST00000473533 CTU2Q2VPK5 515 aaKnown RBP6□□□□□ -1.45
HERC4-209ENST00000473533 FAM174BQ3ZCQ3 159 aa6□□□□□ -1.45
HERC4-209ENST00000473533 RAP1GAP2Q684P5 730 aa6□□□□□ -1.45
HERC4-209ENST00000473533 FBXL22Q6P050 247 aa6□□□□□ -1.45
HERC4-209ENST00000473533 USP50Q70EL3 339 aaPredicted RBP6□□□□□ -1.45
HERC4-209ENST00000473533 PAGE2Q7Z2X7 111 aa6□□□□□ -1.45
HERC4-209ENST00000473533 SNX20Q7Z614 316 aa6□□□□□ -1.45
HERC4-209ENST00000473533 TRIM69Q86WT6 500 aa6□□□□□ -1.45
HERC4-209ENST00000473533 CALHM3Q86XJ0 350 aa6□□□□□ -1.45
HERC4-209ENST00000473533 KRT73Q86Y46 540 aa6□□□□□ -1.45
HERC4-209ENST00000473533 RBFAQ8N0V3 343 aa6□□□□□ -1.45
HERC4-209ENST00000473533 CADM3Q8N126 398 aa6□□□□□ -1.45
HERC4-209ENST00000473533 TTC29Q8NA56 475 aaPredicted RBP6□□□□□ -1.45
HERC4-209ENST00000473533 ZFP90Q8TF47 636 aa6□□□□□ -1.45
HERC4-209ENST00000473533 RASSF5Q8WWW0 418 aa6□□□□□ -1.45
HERC4-209ENST00000473533 EGFL8Q99944 293 aa6□□□□□ -1.45
HERC4-209ENST00000473533 NTMT1Q9BV86 223 aa6□□□□□ -1.45
HERC4-209ENST00000473533 R3HDMLQ9H3Y0 253 aa6□□□□□ -1.45
HERC4-209ENST00000473533 ARMC7Q9H6L4 198 aa6□□□□□ -1.45
HERC4-209ENST00000473533 KRT84Q9NSB2 600 aa6□□□□□ -1.45
HERC4-209ENST00000473533 PLCXD1Q9NUJ7 323 aa6□□□□□ -1.45
HERC4-209ENST00000473533 OSGIN1Q9UJX0 560 aa6□□□□□ -1.45
HERC4-209ENST00000473533 SNX6Q9UNH7 406 aa6□□□□□ -1.45
HERC4-209ENST00000473533 GRIP1Q9Y3R0 1128 aa6□□□□□ -1.45
HERC4-209ENST00000473533 CENPBD1B2RD01 187 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 B4GAT1O43505 415 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 DYRK3O43781 588 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 NOBOXO60393 691 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 DFNA5O60443 496 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 SEC22BO75396 215 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 CLDN11O75508 207 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 FTH1P02794 183 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 RPLP0P05388 317 aaKnown RBP5.99□□□□□ -1.45
HERC4-209ENST00000473533 HTR1AP08908 422 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 BMP4P12644 408 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 TCF3P15923 654 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 CD36P16671 472 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 TACR2P21452 398 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 EIF2DP41214 584 aaKnown RBP5.99□□□□□ -1.45
HERC4-209ENST00000473533 CLDN8P56748 225 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 COPZ1P61923 177 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 RPS14P62263 151 aaKnown RBP5.99□□□□□ -1.45
HERC4-209ENST00000473533 EFEMP1Q12805 493 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 PHKG1Q16816 387 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 C5orf22Q49AR2 442 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 MLIPQ5VWP3 458 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 CPZQ66K79 652 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 IL31Q6EBC2 164 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 ENPP6Q6UWR7 440 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 CCDC81Q6ZN84 652 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 TAS2R42Q7RTR8 314 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 SLC22A16Q86VW1 577 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 SETD6Q8TBK2 473 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 CSGALNACT1Q8TDX6 532 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 FBXO32Q969P5 355 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 TESCQ96BS2 214 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 METTL2AQ96IZ6 378 aaKnown RBP5.99□□□□□ -1.45
HERC4-209ENST00000473533 ACOX2Q99424 681 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 PITX2Q99697 317 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 CPPED1Q9BRF8 314 aaPredicted RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms