RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 OR10G6Q8NH81 332 aa12.75□□□□□ -0.37
TPM3-216ENST00000473036 AHCTF1Q8WYP5 2266 aa12.75□□□□□ -0.37
TPM3-216ENST00000473036 GRAMD1AQ96CP6 724 aa12.75□□□□□ -0.37
TPM3-216ENST00000473036 C9orf72Q96LT7 481 aa12.75□□□□□ -0.37
TPM3-216ENST00000473036 FMO2Q99518 471 aa12.75□□□□□ -0.37
TPM3-216ENST00000473036 NDNQ99608 321 aa12.75□□□□□ -0.37
TPM3-216ENST00000473036 AARSD1Q9BTE6 412 aaKnown RBP12.75□□□□□ -0.37
TPM3-216ENST00000473036 HGH1Q9BTY7 390 aa12.75□□□□□ -0.37
TPM3-216ENST00000473036 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.75□□□□□ -0.37
TPM3-216ENST00000473036 DPH1Q9BZG8 443 aa12.75□□□□□ -0.37
TPM3-216ENST00000473036 TWSG1Q9GZX9 223 aa12.75□□□□□ -0.37
TPM3-216ENST00000473036 STN1Q9H668 368 aaKnown RBP12.75□□□□□ -0.37
TPM3-216ENST00000473036 XKR8Q9H6D3 395 aa12.75□□□□□ -0.37
TPM3-216ENST00000473036 ASCL3Q9NQ33 180 aa12.75□□□□□ -0.37
TPM3-216ENST00000473036 CIDEBQ9UHD4 219 aa12.75□□□□□ -0.37
TPM3-216ENST00000473036 PLAGL1Q9UM63 463 aa12.75□□□□□ -0.37
TPM3-216ENST00000473036 ICKQ9UPZ9 632 aa12.75□□□□□ -0.37
TPM3-216ENST00000473036 A8MU76 341 aa12.74□□□□□ -0.37
TPM3-216ENST00000473036 CAPN5O15484 640 aaPredicted RBP12.74□□□□□ -0.37
TPM3-216ENST00000473036 LSSP48449 732 aa12.74□□□□□ -0.37
TPM3-216ENST00000473036 CXADRP78310 365 aa12.74□□□□□ -0.37
TPM3-216ENST00000473036 GABREP78334 506 aa12.74□□□□□ -0.37
TPM3-216ENST00000473036 SYTL3Q4VX76 610 aa12.74□□□□□ -0.37
TPM3-216ENST00000473036 TAF1BQ53T94 588 aaPredicted RBP12.74□□□□□ -0.37
TPM3-216ENST00000473036 SNAP47Q5SQN1 464 aa12.74□□□□□ -0.37
TPM3-216ENST00000473036 EMBQ6PCB8 327 aa12.74□□□□□ -0.37
TPM3-216ENST00000473036 IGF2-ASQ6U949 168 aa12.74□□□□□ -0.37
TPM3-216ENST00000473036 CYHR1Q6ZMK1 362 aa12.74□□□□□ -0.37
TPM3-216ENST00000473036 RASGRP3Q8IV61 690 aa12.74□□□□□ -0.37
TPM3-216ENST00000473036 AVL9Q8NBF6 648 aa12.74□□□□□ -0.37
TPM3-216ENST00000473036 OR4E2Q8NGC2 313 aa12.74□□□□□ -0.37
TPM3-216ENST00000473036 GABPB2Q8TAK5 448 aaPredicted RBP12.74□□□□□ -0.37
TPM3-216ENST00000473036 GSDMBQ8TAX9 411 aa12.74□□□□□ -0.37
TPM3-216ENST00000473036 CD200R1Q8TD46 325 aa12.74□□□□□ -0.37
TPM3-216ENST00000473036 ASZ1Q8WWH4 475 aa12.74□□□□□ -0.37
TPM3-216ENST00000473036 TMEM159Q96B96 161 aa12.74□□□□□ -0.37
TPM3-216ENST00000473036 AHCYL2Q96HN2 611 aaKnown RBP12.74□□□□□ -0.37
TPM3-216ENST00000473036 TMEM74Q96NL1 305 aa12.74□□□□□ -0.37
TPM3-216ENST00000473036 TGM7Q96PF1 710 aa12.74□□□□□ -0.37
TPM3-216ENST00000473036 FAM167BQ9BTA0 163 aa12.74□□□□□ -0.37
TPM3-216ENST00000473036 ANKZF1Q9H8Y5 726 aa12.74□□□□□ -0.37
TPM3-216ENST00000473036 POLR1BQ9H9Y6 1135 aa12.74□□□□□ -0.37
TPM3-216ENST00000473036 LRRC4CQ9HCJ2 640 aa12.74□□□□□ -0.37
TPM3-216ENST00000473036 OCIAD1Q9NX40 245 aa12.74□□□□□ -0.37
TPM3-216ENST00000473036 KLHL3Q9UH77 587 aa12.74□□□□□ -0.37
TPM3-216ENST00000473036 TSR3Q9UJK0 312 aaKnown RBP12.74□□□□□ -0.37
TPM3-216ENST00000473036 RAB21Q9UL25 225 aa12.74□□□□□ -0.37
TPM3-216ENST00000473036 SPTBP11277 2137 aa12.74□□□□□ -0.37
TPM3-216ENST00000473036 ANKRD12Q6UB98 2062 aa12.74□□□□□ -0.37
TPM3-216ENST00000473036 SPENQ96T58 3664 aaKnown RBP12.73□□□□□ -0.37
TPM3-216ENST00000473036 CCDC187A0A096LP49 1063 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 TCRBV9S1A1TA0A576 114 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 OR5K3A6NET4 321 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 IFRD1O00458 451 aaPredicted RBP12.73□□□□□ -0.37
TPM3-216ENST00000473036 BTN3A1O00481 513 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 FGF3P11487 239 aaPredicted RBP12.73□□□□□ -0.37
TPM3-216ENST00000473036 AMD1P17707 334 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 CHRM3P20309 590 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 PEBP1P30086 187 aaKnown RBP12.73□□□□□ -0.37
TPM3-216ENST00000473036 MAGEA4P43358 317 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 PLEKHS1Q5SXH7 462 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 FBXO38Q6PIJ6 1188 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 PCSK4Q6UW60 755 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 FAM92BQ6ZTR7 304 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 KIAA0408Q6ZU52 694 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 RAB11FIP2Q7L804 512 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 OTOAQ7RTW8 1153 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 GALNT7Q86SF2 657 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 CCDC25Q86WR0 208 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 RELL1Q8IUW5 271 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 ADGRF3Q8IZF5 1079 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 ZBTB2Q8N680 514 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 BMPERQ8N8U9 685 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 OR5K2Q8NHB8 316 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 CFAP61Q8NHU2 1237 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 FLVCR1-AS1Q8TAF5 88 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 CALML6Q8TD86 181 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 PYROXD1Q8WU10 500 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 ZFPM2Q8WW38 1151 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 PKNOX2Q96KN3 472 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 SLC46A1Q96NT5 459 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 PANX3Q96QZ0 392 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 GPR21Q99679 349 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 OLFM1Q99784 485 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 PARD6BQ9BYG5 372 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 RAB33BQ9H082 229 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 EPB41L1Q9H4G0 881 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 TFB2MQ9H5Q4 396 aaKnown RBP12.73□□□□□ -0.37
TPM3-216ENST00000473036 MVB12BQ9H7P6 319 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 PPANQ9NQ55 473 aaKnown RBP12.73□□□□□ -0.37
TPM3-216ENST00000473036 SEMA5BQ9P283 1151 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 EPHA6Q9UF33 1036 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 ASF1AQ9Y294 204 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 LOXL2Q9Y4K0 774 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 PCDHGA8Q9Y5G5 932 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 HEBP2Q9Y5Z4 205 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 COLEC10Q9Y6Z7 277 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 SDK2Q58EX2 2172 aa12.73□□□□□ -0.37
TPM3-216ENST00000473036 IGHV5-51A0A0C4DH38 117 aa12.72□□□□□ -0.37
TPM3-216ENST00000473036 CCDC151A5D8V7 595 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms