RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 SPANXN3Q5MJ09 141 aa8.87□□□□□ -0.99
SYN3-211ENST00000472027 HP1BP3Q5SSJ5 553 aaPredicted RBP8.87□□□□□ -0.99
SYN3-211ENST00000472027 TMTC4Q5T4D3 741 aa8.87□□□□□ -0.99
SYN3-211ENST00000472027 ZNF549Q6P9A3 640 aa8.87□□□□□ -0.99
SYN3-211ENST00000472027 CYB5D1Q6P9G0 228 aa8.87□□□□□ -0.99
SYN3-211ENST00000472027 UNC5DQ6UXZ4 953 aa8.87□□□□□ -0.99
SYN3-211ENST00000472027 VASH2Q86V25 355 aa8.87□□□□□ -0.99
SYN3-211ENST00000472027 KCNMB4Q86W47 210 aa8.87□□□□□ -0.99
SYN3-211ENST00000472027 BPHLQ86WA6 291 aaPredicted RBP8.87□□□□□ -0.99
SYN3-211ENST00000472027 PPP1R3BQ86XI6 285 aa8.87□□□□□ -0.99
SYN3-211ENST00000472027 RASGRP3Q8IV61 690 aa8.87□□□□□ -0.99
SYN3-211ENST00000472027 CACNA2D3Q8IZS8 1091 aa8.87□□□□□ -0.99
SYN3-211ENST00000472027 NLGN4XQ8N0W4 816 aa8.87□□□□□ -0.99
SYN3-211ENST00000472027 PDIK1LQ8N165 341 aa8.87□□□□□ -0.99
SYN3-211ENST00000472027 IL22RA1Q8N6P7 574 aa8.87□□□□□ -0.99
SYN3-211ENST00000472027 NLGN4YQ8NFZ3 816 aaPredicted RBP8.87□□□□□ -0.99
SYN3-211ENST00000472027 CALML6Q8TD86 181 aa8.87□□□□□ -0.99
SYN3-211ENST00000472027 SNRNP27Q8WVK2 155 aaKnown RBP8.87□□□□□ -0.99
SYN3-211ENST00000472027 FAM136AQ96C01 138 aa8.87□□□□□ -0.99
SYN3-211ENST00000472027 RNF31Q96EP0 1072 aa8.87□□□□□ -0.99
SYN3-211ENST00000472027 SNF8Q96H20 258 aa8.87□□□□□ -0.99
SYN3-211ENST00000472027 NAT9Q9BTE0 207 aa8.87□□□□□ -0.99
SYN3-211ENST00000472027 PDE7BQ9NP56 450 aa8.87□□□□□ -0.99
SYN3-211ENST00000472027 IARS2Q9NSE4 1012 aaKnown RBP8.87□□□□□ -0.99
SYN3-211ENST00000472027 OR6C2Q9NZP2 312 aa8.87□□□□□ -0.99
SYN3-211ENST00000472027 FBXO5Q9UKT4 447 aa8.87□□□□□ -0.99
SYN3-211ENST00000472027 RARRES3Q9UL19 164 aa8.87□□□□□ -0.99
SYN3-211ENST00000472027 NFS1Q9Y697 457 aa8.87□□□□□ -0.99
SYN3-211ENST00000472027 ZFHX4Q86UP3 3567 aa8.87□□□□□ -0.99
SYN3-211ENST00000472027 DMXL2Q8TDJ6 3036 aa8.87□□□□□ -0.99
SYN3-211ENST00000472027 CELSR3Q9NYQ7 3312 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 TEX51A0A1B0GUA7 166 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 FAM187AA6NFU0 413 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 ISM1B1AKI9 464 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 E5RI56 91 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 TP73O15350 636 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 KIAA0754O94854 1291 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 C1orf105O95561 183 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 DLGAP3O95886 979 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 RPN2P04844 631 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 CHRM5P08912 532 aaPredicted RBP8.86□□□□□ -0.99
SYN3-211ENST00000472027 ST6GAL1P15907 406 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 WT1P19544 449 aaPredicted RBP8.86□□□□□ -0.99
SYN3-211ENST00000472027 CD9P21926 228 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 ELK3P41970 407 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 RPL21P46778 160 aaKnown RBP8.86□□□□□ -0.99
SYN3-211ENST00000472027 CARSP49589 748 aaKnown RBP8.86□□□□□ -0.99
SYN3-211ENST00000472027 ARL4CP56559 192 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 MPP1Q00013 466 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 C2orf54Q08AI8 447 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 TUBB3Q13509 450 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 GBX1Q14549 363 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.86□□□□□ -0.99
SYN3-211ENST00000472027 ACSBG2Q5FVE4 666 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 PWWP2BQ6NUJ5 590 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 TTC23LQ6PF05 361 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 CNSTQ6PJW8 725 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 SPESP1Q6UW49 350 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 C6orf15Q6UXA7 325 aaPredicted RBP8.86□□□□□ -0.99
SYN3-211ENST00000472027 MAATS1Q7Z4T9 603 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 DCUN1D3Q8IWE4 304 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 C2orf73Q8N5S3 287 aaPredicted RBP8.86□□□□□ -0.99
SYN3-211ENST00000472027 ZBTB2Q8N680 514 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 C2CD4AQ8NCU7 369 aaPredicted RBP8.86□□□□□ -0.99
SYN3-211ENST00000472027 BBOF1Q8ND07 529 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 FLVCR1-AS1Q8TAF5 88 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 SKA2Q8WVK7 121 aaPredicted RBP8.86□□□□□ -0.99
SYN3-211ENST00000472027 RAD51AP1Q96B01 352 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 ZNF501Q96CX3 271 aaPredicted RBP8.86□□□□□ -0.99
SYN3-211ENST00000472027 LRRC39Q96DD0 335 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 FOPNLQ96NB1 174 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 IL17FQ96PD4 163 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 FCRL4Q96PJ5 515 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 TRAPPC9Q96Q05 1148 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 OR2A14Q96R47 310 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 SLC30A3Q99726 388 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 WDR83Q9BRX9 315 aaKnown RBP8.86□□□□□ -0.99
SYN3-211ENST00000472027 ERP44Q9BS26 406 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 FAM167BQ9BTA0 163 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 MENTQ9BUN1 341 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 PITPNM3Q9BZ71 974 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 ULBP3Q9BZM4 244 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 TWSG1Q9GZX9 223 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 KLHL25Q9H0H3 589 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 CCDC68Q9H2F9 335 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 PLAC1Q9HBJ0 212 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 FGF21Q9NSA1 209 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 SOHLH2Q9NX45 425 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 SPHK1Q9NYA1 384 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 CIDEBQ9UHD4 219 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 CHMP2BQ9UQN3 213 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 BTRCQ9Y297 605 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 TEX264Q9Y6I9 313 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 CHD8Q9HCK8 2581 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 LAMA5O15230 3695 aa8.86□□□□□ -0.99
SYN3-211ENST00000472027 LOC101059948A0A1B0GTJ6 334 aa8.85□□□□□ -0.99
SYN3-211ENST00000472027 RASGRF2O14827 1237 aa8.85□□□□□ -0.99
SYN3-211ENST00000472027 MAP3K7O43318 606 aa8.85□□□□□ -0.99
SYN3-211ENST00000472027 RAD51CO43502 376 aa8.85□□□□□ -0.99
SYN3-211ENST00000472027 TIAF1O95411 115 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms