RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 ABOP16442 354 aa6.61□□□□□ -1.35
HDAC1-204ENST00000471488 UGT2B7P16662 529 aa6.61□□□□□ -1.35
HDAC1-204ENST00000471488 KLK2P20151 261 aa6.61□□□□□ -1.35
HDAC1-204ENST00000471488 ITGAXP20702 1163 aa6.61□□□□□ -1.35
HDAC1-204ENST00000471488 GRIA3P42263 894 aa6.61□□□□□ -1.35
HDAC1-204ENST00000471488 NSG1P42857 185 aa6.61□□□□□ -1.35
HDAC1-204ENST00000471488 TNFSF10P50591 281 aa6.61□□□□□ -1.35
HDAC1-204ENST00000471488 RAB28P51157 221 aa6.61□□□□□ -1.35
HDAC1-204ENST00000471488 DYNLT1P63172 113 aa6.61□□□□□ -1.35
HDAC1-204ENST00000471488 EEF1A2Q05639 463 aaKnown RBP6.61□□□□□ -1.35
HDAC1-204ENST00000471488 ZNF33BQ06732 778 aa6.61□□□□□ -1.35
HDAC1-204ENST00000471488 MYBPHQ13203 477 aa6.61□□□□□ -1.35
HDAC1-204ENST00000471488 DPYSL3Q14195 570 aa6.61□□□□□ -1.35
HDAC1-204ENST00000471488 PIGHQ14442 188 aaPredicted RBP6.61□□□□□ -1.35
HDAC1-204ENST00000471488 PAFAH1B3Q15102 231 aaKnown RBP6.61□□□□□ -1.35
HDAC1-204ENST00000471488 ZIC1Q15915 447 aa6.61□□□□□ -1.35
HDAC1-204ENST00000471488 NKG7Q16617 165 aa6.61□□□□□ -1.35
HDAC1-204ENST00000471488 RPUSD3Q6P087 351 aaKnown RBP6.61□□□□□ -1.35
HDAC1-204ENST00000471488 MRPL14Q6P1L8 145 aaKnown RBP6.61□□□□□ -1.35
HDAC1-204ENST00000471488 TLDC1Q6P9B6 456 aa6.61□□□□□ -1.35
HDAC1-204ENST00000471488 CNSTQ6PJW8 725 aa6.61□□□□□ -1.35
HDAC1-204ENST00000471488 SARM1Q6SZW1 724 aa6.61□□□□□ -1.35
HDAC1-204ENST00000471488 IGFL2Q6UWQ7 119 aa6.61□□□□□ -1.35
HDAC1-204ENST00000471488 TAX1BP1Q86VP1 789 aa6.61□□□□□ -1.35
HDAC1-204ENST00000471488 C2orf73Q8N5S3 287 aaPredicted RBP6.61□□□□□ -1.35
HDAC1-204ENST00000471488 CHDHQ8NE62 594 aaPredicted RBP6.61□□□□□ -1.35
HDAC1-204ENST00000471488 DDHD1Q8NEL9 900 aa6.61□□□□□ -1.35
HDAC1-204ENST00000471488 OR11G2Q8NGC1 345 aa6.61□□□□□ -1.35
HDAC1-204ENST00000471488 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.61□□□□□ -1.35
HDAC1-204ENST00000471488 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.61□□□□□ -1.35
HDAC1-204ENST00000471488 TRIM11Q96F44 468 aa6.61□□□□□ -1.35
HDAC1-204ENST00000471488 C14orf79Q96F83 325 aa6.61□□□□□ -1.35
HDAC1-204ENST00000471488 LMF1Q96S06 567 aa6.61□□□□□ -1.35
HDAC1-204ENST00000471488 ZNF559Q9BR84 538 aa6.61□□□□□ -1.35
HDAC1-204ENST00000471488 CCM2Q9BSQ5 444 aa6.61□□□□□ -1.35
HDAC1-204ENST00000471488 FAM96AQ9H5X1 160 aa6.61□□□□□ -1.35
HDAC1-204ENST00000471488 HAUS4Q9H6D7 363 aa6.61□□□□□ -1.35
HDAC1-204ENST00000471488 KLHL1Q9NR64 748 aa6.61□□□□□ -1.35
HDAC1-204ENST00000471488 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.61□□□□□ -1.35
HDAC1-204ENST00000471488 CRLS1Q9UJA2 301 aa6.61□□□□□ -1.35
HDAC1-204ENST00000471488 PLAGL1Q9UM63 463 aa6.61□□□□□ -1.35
HDAC1-204ENST00000471488 PPT2Q9UMR5 302 aa6.61□□□□□ -1.35
HDAC1-204ENST00000471488 MRPS2Q9Y399 296 aaKnown RBP6.61□□□□□ -1.35
HDAC1-204ENST00000471488 DNMT3AQ9Y6K1 912 aaPredicted RBP6.61□□□□□ -1.35
HDAC1-204ENST00000471488 NIPBLQ6KC79 2804 aaeCLIP6.6□□□□□ -1.35
HDAC1-204ENST00000471488 A0A0J9YY10 115 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 A0A1B0GX78 115 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 TMEM200CA6NKL6 621 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 LRRC53A6NM62 1247 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 FAM90A27PA6NNH2 459 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 A8MUI8 341 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 NPIPA5E9PKD4 350 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 STX7O15400 261 aaKnown RBP6.6□□□□□ -1.35
HDAC1-204ENST00000471488 WISP2O76076 250 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 USP1O94782 785 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 ZWINTO95229 277 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 PRAMEF1O95521 474 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 WDPCPO95876 746 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 HPP00738 406 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 CELA2AP08217 269 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 MYBL2P10244 700 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 SKILP12757 684 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 CXCR2P25025 360 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 MCM3P25205 808 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 CHRNA4P43681 627 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 IST1P53990 364 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 SLC25A11Q02978 314 aaKnown RBP6.6□□□□□ -1.35
HDAC1-204ENST00000471488 OCA2Q04671 838 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 KLHL30Q0D2K2 578 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 SLC10A2Q12908 348 aaPredicted RBP6.6□□□□□ -1.35
HDAC1-204ENST00000471488 NFKBIBQ15653 356 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 CEBPEQ15744 281 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 ODF2Q5BJF6 829 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 CCDC183Q5T5S1 534 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 ZNF324BQ6AW86 544 aaPredicted RBP6.6□□□□□ -1.35
HDAC1-204ENST00000471488 HIBCHQ6NVY1 386 aaPredicted RBP6.6□□□□□ -1.35
HDAC1-204ENST00000471488 NPNTQ6UXI9 565 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 OVCH1Q7RTY7 1134 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 MAP7D3Q8IWC1 876 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 ADGRF3Q8IZF5 1079 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 DTWD1Q8N5C7 304 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 CNTD1Q8N815 330 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 DNAAF3Q8N9W5 541 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 TTC29Q8NA56 475 aaPredicted RBP6.6□□□□□ -1.35
HDAC1-204ENST00000471488 IPMKQ8NFU5 416 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 ZNF398Q8TD17 642 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 MIEF2Q96C03 454 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 IMP4Q96G21 291 aaKnown RBP6.6□□□□□ -1.35
HDAC1-204ENST00000471488 TRIB3Q96RU7 358 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 TMUB1Q9BVT8 246 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 MAK16Q9BXY0 300 aaKnown RBP6.6□□□□□ -1.35
HDAC1-204ENST00000471488 PITPNM3Q9BZ71 974 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 ASB8Q9H765 288 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 MRM3Q9HC36 420 aaKnown RBP6.6□□□□□ -1.35
HDAC1-204ENST00000471488 SLC22A11Q9NSA0 550 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 CCM2LQ9NUG4 571 aaPredicted RBP6.6□□□□□ -1.35
HDAC1-204ENST00000471488 FANCLQ9NW38 375 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 ANKRD10Q9NXR5 420 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 SPHK1Q9NYA1 384 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 COQ3Q9NZJ6 369 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms