RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 C11orf96Q7Z7L8 435 aa8.85□□□□□ -0.99
SF3A1-206ENST00000471037 BPHLQ86WA6 291 aaPredicted RBP8.85□□□□□ -0.99
SF3A1-206ENST00000471037 ANKMY2Q8IV38 441 aa8.85□□□□□ -0.99
SF3A1-206ENST00000471037 PALM2Q8IXS6 379 aa8.85□□□□□ -0.99
SF3A1-206ENST00000471037 AGGF1Q8N302 714 aaeCLIP8.85□□□□□ -0.99
SF3A1-206ENST00000471037 BLOC1S5Q8TDH9 187 aa8.85□□□□□ -0.99
SF3A1-206ENST00000471037 CT55Q8WUE5 264 aa8.85□□□□□ -0.99
SF3A1-206ENST00000471037 UBLCP1Q8WVY7 318 aaPredicted RBP8.85□□□□□ -0.99
SF3A1-206ENST00000471037 THAP4Q8WY91 577 aa8.85□□□□□ -0.99
SF3A1-206ENST00000471037 RNF31Q96EP0 1072 aa8.85□□□□□ -0.99
SF3A1-206ENST00000471037 VPS35Q96QK1 796 aa8.85□□□□□ -0.99
SF3A1-206ENST00000471037 C19orf43Q9BQ61 176 aa8.85□□□□□ -0.99
SF3A1-206ENST00000471037 WDR83Q9BRX9 315 aaKnown RBP8.85□□□□□ -0.99
SF3A1-206ENST00000471037 GPR87Q9BY21 358 aa8.85□□□□□ -0.99
SF3A1-206ENST00000471037 TRIM55Q9BYV6 548 aa8.85□□□□□ -0.99
SF3A1-206ENST00000471037 ACTL8Q9H568 366 aa8.85□□□□□ -0.99
SF3A1-206ENST00000471037 PDE7BQ9NP56 450 aa8.85□□□□□ -0.99
SF3A1-206ENST00000471037 MLXIPLQ9NP71 852 aa8.85□□□□□ -0.99
SF3A1-206ENST00000471037 NINJ2Q9NZG7 142 aa8.85□□□□□ -0.99
SF3A1-206ENST00000471037 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.85□□□□□ -0.99
SF3A1-206ENST00000471037 RIMKLBQ9ULI2 386 aa8.85□□□□□ -0.99
SF3A1-206ENST00000471037 VPS4AQ9UN37 437 aa8.85□□□□□ -0.99
SF3A1-206ENST00000471037 DNAJC16Q9Y2G8 782 aa8.85□□□□□ -0.99
SF3A1-206ENST00000471037 ZNF711Q9Y462 761 aa8.85□□□□□ -0.99
SF3A1-206ENST00000471037 PCDHGA9Q9Y5G4 932 aaKnown RBP8.85□□□□□ -0.99
SF3A1-206ENST00000471037 TEX15Q9BXT5 2789 aa8.85□□□□□ -0.99
SF3A1-206ENST00000471037 MROH6A6NGR9 719 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 C2orf81A6NN90 581 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 TTLL8A6PVC2 850 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 RIPK2O43353 540 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 LDB2O43679 373 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 KCNJ13O60928 360 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 DNAJB5O75953 348 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 SORBS2O94875 1100 aaKnown RBP8.84□□□□□ -0.99
SF3A1-206ENST00000471037 CDK14O94921 469 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 PIRTP0C851 137 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 BPIP17213 487 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 VCLP18206 1134 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 PAMP19021 973 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 PSMA3P25788 255 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 RPL10P27635 214 aaKnown RBP8.84□□□□□ -0.99
SF3A1-206ENST00000471037 HSD17B3P37058 310 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 UQCRFS1P47985 274 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 DMPKQ09013 629 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 TUBB3Q13509 450 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 FRG1Q14331 258 aaKnown RBP8.84□□□□□ -0.99
SF3A1-206ENST00000471037 KYNUQ16719 465 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 KHDC1Q4VXA5 237 aaKnown RBP8.84□□□□□ -0.99
SF3A1-206ENST00000471037 HP1BP3Q5SSJ5 553 aaPredicted RBP8.84□□□□□ -0.99
SF3A1-206ENST00000471037 TSTD2Q5T7W7 516 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 FHL5Q5TD97 284 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 PWWP2BQ6NUJ5 590 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 IRGCQ6NXR0 463 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 ZNF449Q6P9G9 518 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 UNC5AQ6ZN44 842 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 FAM92BQ6ZTR7 304 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 C3orf62Q6ZUJ4 267 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 CYS1Q717R9 158 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 GLT6D1Q7Z4J2 308 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 SYVN1Q86TM6 617 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 KMT5CQ86Y97 462 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 IGDCC3Q8IVU1 814 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 EFCAB3Q8N7B9 438 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 GSDMBQ8TAX9 411 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 CPT1CQ8TCG5 803 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 DTX3LQ8TDB6 740 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 STYXQ8WUJ0 223 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 ZNF669Q96BR6 464 aaPredicted RBP8.84□□□□□ -0.99
SF3A1-206ENST00000471037 CXorf40BQ96DE9 158 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 CFAP36Q96G28 342 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 ELMO2Q96JJ3 720 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 GPR63Q9BZJ6 419 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 UNC79Q9P2D8 2635 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 PLEKHB1Q9UF11 243 aaPredicted RBP8.84□□□□□ -0.99
SF3A1-206ENST00000471037 RARRES3Q9UL19 164 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 TMPRSS11EQ9UL52 423 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 SPO11Q9Y5K1 396 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 FAM169AQ9Y6X4 670 aa8.84□□□□□ -0.99
SF3A1-206ENST00000471037 SPTBN1Q01082 2364 aaKnown RBP8.83□□□□□ -1
SF3A1-206ENST00000471037 A0A087WUV0 522 aaPredicted RBP8.83□□□□□ -1
SF3A1-206ENST00000471037 IGHV5-51A0A0C4DH38 117 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 MTX2O75431 263 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 AGFG2O95081 481 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 ACSL3O95573 720 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 NUDT17P0C025 328 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 FOLR1P15328 257 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 LPOP22079 712 aaPredicted RBP8.83□□□□□ -1
SF3A1-206ENST00000471037 GNLYP22749 145 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 PTPN4P29074 926 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 SSTR1P30872 391 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 STX2P32856 288 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 HMGCLP35914 325 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 HALP42357 657 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 PGDP52209 483 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 ZNF140P52738 457 aaPredicted RBP8.83□□□□□ -1
SF3A1-206ENST00000471037 GPX6P59796 221 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 PPP1CAP62136 330 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 ACY1Q03154 408 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 ACVR1Q04771 509 aa8.83□□□□□ -1
SF3A1-206ENST00000471037 CASP8Q14790 479 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms