RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 PSD3Q9NYI0 1048 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 IKZF3Q9UKT9 509 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 PCYT1BQ9Y5K3 369 aaPredicted RBP9.52□□□□□ -0.89
CCM2-204ENST00000470837 SLCO1B7G3V0H7 640 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 NDUFAB1O14561 156 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 HRO43593 1189 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 KLK8O60259 260 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 CHEK2O96017 543 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 CFIP05156 583 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 F3P13726 295 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 MTHFD2P13995 350 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 NME1P15531 152 aaKnown RBP9.51□□□□□ -0.89
CCM2-204ENST00000470837 EPB42P16452 691 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 CCND1P24385 295 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 AK4P27144 223 aaPredicted RBP9.51□□□□□ -0.89
CCM2-204ENST00000470837 ACADLP28330 430 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 HOXD12P35452 270 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 HSPA7P48741 367 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 HK2P52789 917 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 SEC24CP53992 1094 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 LCP2Q13094 533 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 PRKAA1Q13131 559 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 SRSF5Q13243 272 aaKnown RBP9.51□□□□□ -0.89
CCM2-204ENST00000470837 PCBP2Q15366 365 aaKnown RBP eCLIP9.51□□□□□ -0.89
CCM2-204ENST00000470837 ARL13AQ5H913 290 aaPredicted RBP9.51□□□□□ -0.89
CCM2-204ENST00000470837 TPRG1LQ5T0D9 272 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 THEMIS2Q5TEJ8 643 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 GKAP1Q5VSY0 366 aaPredicted RBP9.51□□□□□ -0.89
CCM2-204ENST00000470837 CAPRIN2Q6IMN6 1127 aaKnown RBP9.51□□□□□ -0.89
CCM2-204ENST00000470837 CAPN13Q6MZZ7 669 aaPredicted RBP9.51□□□□□ -0.89
CCM2-204ENST00000470837 LAYNQ6UX15 382 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 FRMD7Q6ZUT3 714 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 LRRC70Q7Z2Q7 622 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 SYT12Q8IV01 421 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 SDR16C5Q8N3Y7 309 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 ANKS4BQ8N8V4 417 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 SNX31Q8N9S9 440 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 FAM46DQ8NEK8 389 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 SPDYE1Q8NFV5 336 aaPredicted RBP9.51□□□□□ -0.89
CCM2-204ENST00000470837 BCAS4Q8TDM0 211 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 GPBAR1Q8TDU6 330 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 LMX1AQ8TE12 382 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 CCT6BQ92526 530 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 SH3KBP1Q96B97 665 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 MED8Q96G25 268 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 ZC3H10Q96K80 434 aaKnown RBP9.51□□□□□ -0.89
CCM2-204ENST00000470837 RMDN2Q96LZ7 410 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 HGH1Q9BTY7 390 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 TRIM55Q9BYV6 548 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 CD244Q9BZW8 370 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 ZDHHC5Q9C0B5 715 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 PFDN4Q9NQP4 134 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 GULP1Q9UBP9 304 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 TBC1D29Q9UFV1 150 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 PTBP2Q9UKA9 531 aaKnown RBP9.51□□□□□ -0.89
CCM2-204ENST00000470837 PLEKHM1Q9Y4G2 1056 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 CFAP20Q9Y6A4 193 aaKnown RBP9.51□□□□□ -0.89
CCM2-204ENST00000470837 BPTFQ12830 3046 aa9.51□□□□□ -0.89
CCM2-204ENST00000470837 ATXN2Q99700 1313 aaKnown RBP9.51□□□□□ -0.89
CCM2-204ENST00000470837 NUMA1Q14980 2115 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 KIR2DS5A0A0G2JLQ3 304 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 A0A0G2JNG1 304 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 A0A1B0GVT2 93 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 FAM86C2PA6NEL3 165 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 K7EPI3 171 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 KIR2DS3K7RE56 304 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 MYO1CO00159 1063 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 GALR2O43603 387 aaPredicted RBP9.5□□□□□ -0.89
CCM2-204ENST00000470837 RRP9O43818 475 aaKnown RBP9.5□□□□□ -0.89
CCM2-204ENST00000470837 DFNA5O60443 496 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 EDF1O60869 148 aaKnown RBP9.5□□□□□ -0.89
CCM2-204ENST00000470837 SNNO75324 88 aaPredicted RBP9.5□□□□□ -0.89
CCM2-204ENST00000470837 WDR47O94967 919 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 SIX3O95343 332 aaPredicted RBP9.5□□□□□ -0.89
CCM2-204ENST00000470837 FAM107AO95990 144 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 OTCP00480 354 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 VIPP01282 170 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 WNT1P04628 370 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 ANXA6P08133 673 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 KITP10721 976 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 MTHFD1P11586 935 aaKnown RBP9.5□□□□□ -0.89
CCM2-204ENST00000470837 AGTR2P50052 363 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 CCNG1P51959 295 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 CLCQ05315 142 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 GABPB1Q06547 395 aaPredicted RBP9.5□□□□□ -0.89
CCM2-204ENST00000470837 GALNT1Q10472 559 aaPredicted RBP9.5□□□□□ -0.89
CCM2-204ENST00000470837 PRKG2Q13237 762 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 GTF2H2Q13888 395 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 KIR2DS5Q14953 304 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 ARHGAP19Q14CB8 494 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 RPE65Q16518 533 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 DUOXA1Q1HG43 343 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.5□□□□□ -0.89
CCM2-204ENST00000470837 GTF2H2CQ6P1K8 395 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 AGTRAPQ6RW13 159 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 IL27RAQ6UWB1 636 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 ABRAXAS1Q6UWZ7 409 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 SLC9B2Q86UD5 537 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 TEX9Q8N6V9 391 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 OR5AR1Q8NGP9 310 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms