RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 CAPN1P07384 714 aa15.77■□□□□ 0.12
COL9A3-208ENST00000469802 RAB40ALP0C0E4 278 aa15.77■□□□□ 0.12
COL9A3-208ENST00000469802 UGT2B7P16662 529 aa15.77■□□□□ 0.12
COL9A3-208ENST00000469802 RPL22P35268 128 aaKnown RBP15.77■□□□□ 0.12
COL9A3-208ENST00000469802 GABRA4P48169 554 aa15.77■□□□□ 0.12
COL9A3-208ENST00000469802 RPS15P62841 145 aaKnown RBP15.77■□□□□ 0.12
COL9A3-208ENST00000469802 SYTL3Q4VX76 610 aa15.77■□□□□ 0.12
COL9A3-208ENST00000469802 ZNF385CQ66K41 422 aaPredicted RBP15.77■□□□□ 0.12
COL9A3-208ENST00000469802 NAPRTQ6XQN6 538 aa15.77■□□□□ 0.12
COL9A3-208ENST00000469802 UNC5AQ6ZN44 842 aa15.77■□□□□ 0.12
COL9A3-208ENST00000469802 SLC22A15Q8IZD6 547 aa15.77■□□□□ 0.12
COL9A3-208ENST00000469802 C19orf47Q8N9M1 422 aaKnown RBP15.77■□□□□ 0.12
COL9A3-208ENST00000469802 LKAAEAR1Q8TD35 194 aa15.77■□□□□ 0.12
COL9A3-208ENST00000469802 THAP4Q8WY91 577 aa15.77■□□□□ 0.12
COL9A3-208ENST00000469802 OR2A14Q96R47 310 aa15.77■□□□□ 0.12
COL9A3-208ENST00000469802 TRIM55Q9BYV6 548 aa15.77■□□□□ 0.12
COL9A3-208ENST00000469802 ACTR5Q9H9F9 607 aaPredicted RBP15.77■□□□□ 0.12
COL9A3-208ENST00000469802 SPHK1Q9NYA1 384 aa15.77■□□□□ 0.12
COL9A3-208ENST00000469802 OR6C2Q9NZP2 312 aa15.77■□□□□ 0.12
COL9A3-208ENST00000469802 TLK1Q9UKI8 766 aa15.77■□□□□ 0.12
COL9A3-208ENST00000469802 FARSAQ9Y285 508 aaKnown RBP15.77■□□□□ 0.12
COL9A3-208ENST00000469802 ZKSCAN5Q9Y2L8 839 aa15.77■□□□□ 0.12
COL9A3-208ENST00000469802 ANKRD12Q6UB98 2062 aa15.77■□□□□ 0.11
COL9A3-208ENST00000469802 HECTD1Q9ULT8 2610 aa15.77■□□□□ 0.11
COL9A3-208ENST00000469802 RELNP78509 3460 aa15.77■□□□□ 0.11
COL9A3-208ENST00000469802 DNAJB5O75953 348 aa15.76■□□□□ 0.11
COL9A3-208ENST00000469802 CHRM5P08912 532 aaPredicted RBP15.76■□□□□ 0.11
COL9A3-208ENST00000469802 ZSCAN5DPP0CG00 497 aa15.76■□□□□ 0.11
COL9A3-208ENST00000469802 NR1D1P20393 614 aa15.76■□□□□ 0.11
COL9A3-208ENST00000469802 CYP2A7P20853 494 aa15.76■□□□□ 0.11
COL9A3-208ENST00000469802 PEBP1P30086 187 aaKnown RBP15.76■□□□□ 0.11
COL9A3-208ENST00000469802 CCR7P32248 378 aa15.76■□□□□ 0.11
COL9A3-208ENST00000469802 ITGA1P56199 1179 aa15.76■□□□□ 0.11
COL9A3-208ENST00000469802 BRD3Q15059 726 aa15.76■□□□□ 0.11
COL9A3-208ENST00000469802 ZIC1Q15915 447 aa15.76■□□□□ 0.11
COL9A3-208ENST00000469802 CPZQ66K79 652 aa15.76■□□□□ 0.11
COL9A3-208ENST00000469802 TRIM73Q86UV7 250 aa15.76■□□□□ 0.11
COL9A3-208ENST00000469802 SYTL1Q8IYJ3 562 aa15.76■□□□□ 0.11
COL9A3-208ENST00000469802 ENDOVQ8N8Q3 282 aaKnown RBP15.76■□□□□ 0.11
COL9A3-208ENST00000469802 PPHLN1Q8NEY8 458 aaKnown RBP15.76■□□□□ 0.11
COL9A3-208ENST00000469802 TTC1Q99614 292 aa15.76■□□□□ 0.11
COL9A3-208ENST00000469802 MENTQ9BUN1 341 aa15.76■□□□□ 0.11
COL9A3-208ENST00000469802 AP1M1Q9BXS5 423 aa15.76■□□□□ 0.11
COL9A3-208ENST00000469802 NLNQ9BYT8 704 aa15.76■□□□□ 0.11
COL9A3-208ENST00000469802 KLHL25Q9H0H3 589 aa15.76■□□□□ 0.11
COL9A3-208ENST00000469802 FAM60AQ9NP50 221 aa15.76■□□□□ 0.11
COL9A3-208ENST00000469802 TREX1Q9NSU2 369 aa15.76■□□□□ 0.11
COL9A3-208ENST00000469802 MARCH4Q9P2E8 410 aaPredicted RBP15.76■□□□□ 0.11
COL9A3-208ENST00000469802 DRG1Q9Y295 367 aaKnown RBP15.76■□□□□ 0.11
COL9A3-208ENST00000469802 F8W8V4 182 aa15.75■□□□□ 0.11
COL9A3-208ENST00000469802 MAP3K7O43318 606 aa15.75■□□□□ 0.11
COL9A3-208ENST00000469802 HCRTR1O43613 425 aa15.75■□□□□ 0.11
COL9A3-208ENST00000469802 GPC4O75487 556 aa15.75■□□□□ 0.11
COL9A3-208ENST00000469802 PDGFAP04085 211 aa15.75■□□□□ 0.11
COL9A3-208ENST00000469802 CCDC175P0C221 793 aa15.75■□□□□ 0.11
COL9A3-208ENST00000469802 PRAMEP78395 509 aa15.75■□□□□ 0.11
COL9A3-208ENST00000469802 FOXK1P85037 733 aa15.75■□□□□ 0.11
COL9A3-208ENST00000469802 KLRB1Q12918 225 aa15.75■□□□□ 0.11
COL9A3-208ENST00000469802 FASTKD1Q53R41 847 aaKnown RBP15.75■□□□□ 0.11
COL9A3-208ENST00000469802 DNAJC21Q5F1R6 531 aaKnown RBP15.75■□□□□ 0.11
COL9A3-208ENST00000469802 AARS2Q5JTZ9 985 aaKnown RBP15.75■□□□□ 0.11
COL9A3-208ENST00000469802 PCID2Q5JVF3 399 aa15.75■□□□□ 0.11
COL9A3-208ENST00000469802 VRK3Q8IV63 474 aa15.75■□□□□ 0.11
COL9A3-208ENST00000469802 OR6P1Q8NGX9 317 aa15.75■□□□□ 0.11
COL9A3-208ENST00000469802 CLIP3Q96DZ5 547 aa15.75■□□□□ 0.11
COL9A3-208ENST00000469802 TCTN2Q96GX1 697 aa15.75■□□□□ 0.11
COL9A3-208ENST00000469802 DPH2Q9BQC3 489 aaPredicted RBP15.75■□□□□ 0.11
COL9A3-208ENST00000469802 CARD6Q9BX69 1037 aa15.75■□□□□ 0.11
COL9A3-208ENST00000469802 CHRAC1Q9NRG0 131 aa15.75■□□□□ 0.11
COL9A3-208ENST00000469802 CATSPERZQ9NTU4 200 aa15.75■□□□□ 0.11
COL9A3-208ENST00000469802 SERTAD3Q9UJW9 196 aa15.75■□□□□ 0.11
COL9A3-208ENST00000469802 TCFL5Q9UL49 500 aa15.75■□□□□ 0.11
COL9A3-208ENST00000469802 A0A0J9YY10 115 aa15.74■□□□□ 0.11
COL9A3-208ENST00000469802 E7EQ34 232 aa15.74■□□□□ 0.11
COL9A3-208ENST00000469802 PKLRP30613 574 aa15.74■□□□□ 0.11
COL9A3-208ENST00000469802 GRB7Q14451 532 aa15.74■□□□□ 0.11
COL9A3-208ENST00000469802 KIR2DS3Q14952 304 aa15.74■□□□□ 0.11
COL9A3-208ENST00000469802 NCF4Q15080 339 aa15.74■□□□□ 0.11
COL9A3-208ENST00000469802 SLC5A12Q1EHB4 618 aa15.74■□□□□ 0.11
COL9A3-208ENST00000469802 PTCHD3Q3KNS1 767 aa15.74■□□□□ 0.11
COL9A3-208ENST00000469802 C4orf22Q6V702 233 aa15.74■□□□□ 0.11
COL9A3-208ENST00000469802 LDB1Q86U70 411 aaPredicted RBP15.74■□□□□ 0.11
COL9A3-208ENST00000469802 MPP5Q8N3R9 675 aa15.74■□□□□ 0.11
COL9A3-208ENST00000469802 ASZ1Q8WWH4 475 aa15.74■□□□□ 0.11
COL9A3-208ENST00000469802 IL22Q9GZX6 179 aa15.74■□□□□ 0.11
COL9A3-208ENST00000469802 MLXIPLQ9NP71 852 aa15.74■□□□□ 0.11
COL9A3-208ENST00000469802 LZTFL1Q9NQ48 299 aa15.74■□□□□ 0.11
COL9A3-208ENST00000469802 PLAGL1Q9UM63 463 aa15.74■□□□□ 0.11
COL9A3-208ENST00000469802 SNX7Q9UNH6 387 aa15.74■□□□□ 0.11
COL9A3-208ENST00000469802 TDRKHQ9Y2W6 561 aaKnown RBP15.74■□□□□ 0.11
COL9A3-208ENST00000469802 PCDHGA9Q9Y5G4 932 aaKnown RBP15.74■□□□□ 0.11
COL9A3-208ENST00000469802 DOPEY2Q9Y3R5 2298 aa15.73■□□□□ 0.11
COL9A3-208ENST00000469802 IQCF5A8MTL0 148 aa15.73■□□□□ 0.11
COL9A3-208ENST00000469802 PRMT5O14744 637 aaPredicted RBP15.73■□□□□ 0.11
COL9A3-208ENST00000469802 ZNF749O43361 778 aa15.73■□□□□ 0.11
COL9A3-208ENST00000469802 KDM1AO60341 852 aa15.73■□□□□ 0.11
COL9A3-208ENST00000469802 CEACAM4O75871 244 aa15.73■□□□□ 0.11
COL9A3-208ENST00000469802 SLCO2B1O94956 709 aa15.73■□□□□ 0.11
COL9A3-208ENST00000469802 FGGP02679 453 aa15.73■□□□□ 0.11
COL9A3-208ENST00000469802 HBQ1P09105 142 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms