RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 MICALCLQ6ZW33 695 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 USP45Q70EL2 814 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 RAB43Q86YS6 212 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 LPCAT1Q8NF37 534 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 ARRDC2Q8TBH0 407 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 PPP4R1Q8TF05 950 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 FBLIM1Q8WUP2 373 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 CPT1BQ92523 772 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 UTP4Q969X6 686 aaKnown RBP5.11□□□□□ -1.59
PTPN4-209ENST00000469511 CXorf40BQ96DE9 158 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 FAM81BQ96LP2 452 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 MCEEQ96PE7 176 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 GBP5Q96PP8 586 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 SELENOOQ9BVL4 669 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 SPRTNQ9H040 489 aaPredicted RBP5.11□□□□□ -1.59
PTPN4-209ENST00000469511 LIME1Q9H400 295 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 RMI1Q9H9A7 625 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 ACTR5Q9H9F9 607 aaPredicted RBP5.11□□□□□ -1.59
PTPN4-209ENST00000469511 MCCC2Q9HCC0 563 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 TRIM39Q9HCM9 518 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 FAM60AQ9NP50 221 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 SSU72Q9NP77 194 aaKnown RBP5.11□□□□□ -1.59
PTPN4-209ENST00000469511 CHST11Q9NPF2 352 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 SAMSN1Q9NSI8 373 aaKnown RBP5.11□□□□□ -1.59
PTPN4-209ENST00000469511 OLAHQ9NV23 265 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 TMEM51Q9NW97 253 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 SOHLH2Q9NX45 425 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 ADAM22Q9P0K1 906 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 BTRCQ9Y297 605 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 COL6A5A8TX70 2615 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 NSD1Q96L73 2696 aaPredicted RBP5.11□□□□□ -1.59
PTPN4-209ENST00000469511 MPDZO75970 2070 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 DNAJC13O75165 2243 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 C1orf232A0A0U1RR37 186 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 A0A1W2PQ67 120 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 BICDL2A1A5D9 508 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 TLCD2A6NGC4 264 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 F8VZ95 297 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 H3BMH7 237 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 AURKAO14965 403 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 DAPK3O43293 454 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 UNC5CO95185 931 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 ZBTB11O95625 1053 aaPredicted RBP5.1□□□□□ -1.59
PTPN4-209ENST00000469511 ALPPP05187 535 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 UCHL3P15374 230 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 ZNF30P17039 623 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 KLK2P20151 261 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 RAB6AP20340 208 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 CAPN3P20807 821 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 IDSP22304 550 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 IL1R2P27930 398 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 CA7P43166 264 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 MMP13P45452 471 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 MTIF2P46199 727 aaKnown RBP5.1□□□□□ -1.59
PTPN4-209ENST00000469511 GSK3AP49840 483 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 TMPRSS15P98073 1019 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 PMP22Q01453 160 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 CDR2Q01850 454 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 ITKQ08881 620 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 FOXD4Q12950 439 aaPredicted RBP5.1□□□□□ -1.59
PTPN4-209ENST00000469511 DPYSQ14117 519 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 NFE2L1Q14494 772 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 PLCL1Q15111 1095 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 CLEC16AQ2KHT3 1053 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 DEFB110Q30KQ9 67 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 AGAP9Q5VTM2 703 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 TXNRD3NBQ6F5E7 133 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 UNC5AQ6ZN44 842 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 SHISA6Q6ZSJ9 500 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 CDHR3Q6ZTQ4 885 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 B4GALNT4Q76KP1 1039 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 MON1BQ7L1V2 547 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 LRRTM4Q86VH4 590 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 CEP97Q8IW35 865 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 LILRA3Q8N6C8 439 aaPredicted RBP5.1□□□□□ -1.59
PTPN4-209ENST00000469511 AVL9Q8NBF6 648 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 CLEC1AQ8NC01 280 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 ACBD4Q8NC06 268 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 C3orf20Q8ND61 904 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 OR1N1Q8NGS0 311 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 NR4A3Q92570 626 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 GLYATL1Q969I3 302 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 MTFMTQ96DP5 389 aaKnown RBP5.1□□□□□ -1.59
PTPN4-209ENST00000469511 C14orf79Q96F83 325 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 MAGEB10Q96LZ2 347 aaPredicted RBP5.1□□□□□ -1.59
PTPN4-209ENST00000469511 FER1L6-AS2Q96M78 137 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 ZNF599Q96NL3 588 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 SPATA16Q9BXB7 569 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 TDRD1Q9BXT4 1180 aaKnown RBP5.1□□□□□ -1.59
PTPN4-209ENST00000469511 ENKD1Q9H0I2 346 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 GANQ9H2C0 597 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 TAS2R14Q9NYV8 317 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 DHCR7Q9UBM7 475 aaKnown RBP5.1□□□□□ -1.59
PTPN4-209ENST00000469511 TINAGQ9UJW2 476 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 FBXL4Q9UKA2 621 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 SHOC2Q9UQ13 582 aa5.1□□□□□ -1.59
PTPN4-209ENST00000469511 RPH3AQ9Y2J0 694 aaPredicted RBP5.1□□□□□ -1.59
PTPN4-209ENST00000469511 FAM95CA0A1B0GW59 222 aa5.09□□□□□ -1.59
PTPN4-209ENST00000469511 CCDC66A2RUB6 948 aa5.09□□□□□ -1.59
PTPN4-209ENST00000469511 AGPSO00116 658 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms