RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 CDC20Q12834 499 aa17.7■□□□□ 0.42
PHGDH-204ENST00000469443 TMED2Q15363 201 aa17.7■□□□□ 0.42
PHGDH-204ENST00000469443 KIAA0930Q6ICG6 404 aaPredicted RBP17.7■□□□□ 0.42
PHGDH-204ENST00000469443 MRNIPQ6NTE8 343 aa17.7■□□□□ 0.42
PHGDH-204ENST00000469443 SPESP1Q6UW49 350 aa17.7■□□□□ 0.42
PHGDH-204ENST00000469443 SDCCAG8Q86SQ7 713 aaPredicted RBP17.7■□□□□ 0.42
PHGDH-204ENST00000469443 CAND1Q86VP6 1230 aaKnown RBP17.7■□□□□ 0.42
PHGDH-204ENST00000469443 VRK3Q8IV63 474 aa17.7■□□□□ 0.42
PHGDH-204ENST00000469443 MCUQ8NE86 351 aa17.7■□□□□ 0.42
PHGDH-204ENST00000469443 GRK7Q8WTQ7 553 aa17.7■□□□□ 0.42
PHGDH-204ENST00000469443 TRAPPC9Q96Q05 1148 aa17.7■□□□□ 0.42
PHGDH-204ENST00000469443 FANCEQ9HB96 536 aa17.7■□□□□ 0.42
PHGDH-204ENST00000469443 SYTL2Q9HCH5 934 aa17.7■□□□□ 0.42
PHGDH-204ENST00000469443 LHX9Q9NQ69 397 aa17.7■□□□□ 0.42
PHGDH-204ENST00000469443 OR6C2Q9NZP2 312 aa17.7■□□□□ 0.42
PHGDH-204ENST00000469443 SAMD15Q9P1V8 674 aa17.7■□□□□ 0.42
PHGDH-204ENST00000469443 KCND3Q9UK17 655 aa17.7■□□□□ 0.42
PHGDH-204ENST00000469443 MRPS18BQ9Y676 258 aaKnown RBP17.7■□□□□ 0.42
PHGDH-204ENST00000469443 MAP3K7O43318 606 aa17.69■□□□□ 0.42
PHGDH-204ENST00000469443 CPNE3O75131 537 aaKnown RBP17.69■□□□□ 0.42
PHGDH-204ENST00000469443 SCRG1O75711 98 aa17.69■□□□□ 0.42
PHGDH-204ENST00000469443 SLCO2B1O94956 709 aa17.69■□□□□ 0.42
PHGDH-204ENST00000469443 CHRM5P08912 532 aaPredicted RBP17.69■□□□□ 0.42
PHGDH-204ENST00000469443 FAM87AP0C7U9 286 aa17.69■□□□□ 0.42
PHGDH-204ENST00000469443 MSL3P1P0C860 447 aa17.69■□□□□ 0.42
PHGDH-204ENST00000469443 PRKAR1AP10644 381 aa17.69■□□□□ 0.42
PHGDH-204ENST00000469443 SFTPCP11686 197 aa17.69■□□□□ 0.42
PHGDH-204ENST00000469443 FNTAP49354 379 aa17.69■□□□□ 0.42
PHGDH-204ENST00000469443 EIF3BP55884 814 aaKnown RBP17.69■□□□□ 0.42
PHGDH-204ENST00000469443 TYSND1Q2T9J0 566 aa17.69■□□□□ 0.42
PHGDH-204ENST00000469443 CASC4Q6P4E1 433 aa17.69■□□□□ 0.42
PHGDH-204ENST00000469443 UNC5DQ6UXZ4 953 aa17.69■□□□□ 0.42
PHGDH-204ENST00000469443 HOOK3Q86VS8 718 aa17.69■□□□□ 0.42
PHGDH-204ENST00000469443 TMEM126BQ8IUX1 230 aa17.69■□□□□ 0.42
PHGDH-204ENST00000469443 TCF12Q99081 682 aa17.69■□□□□ 0.42
PHGDH-204ENST00000469443 TWSG1Q9GZX9 223 aa17.69■□□□□ 0.42
PHGDH-204ENST00000469443 XAB2Q9HCS7 855 aaKnown RBP17.69■□□□□ 0.42
PHGDH-204ENST00000469443 PLAGL1Q9UM63 463 aa17.69■□□□□ 0.42
PHGDH-204ENST00000469443 KPNA5O15131 536 aa17.68■□□□□ 0.42
PHGDH-204ENST00000469443 PFDN6O15212 129 aa17.68■□□□□ 0.42
PHGDH-204ENST00000469443 ZNF185O15231 689 aa17.68■□□□□ 0.42
PHGDH-204ENST00000469443 RPN2P04844 631 aa17.68■□□□□ 0.42
PHGDH-204ENST00000469443 PVRP15151 417 aa17.68■□□□□ 0.42
PHGDH-204ENST00000469443 UGT2B7P16662 529 aa17.68■□□□□ 0.42
PHGDH-204ENST00000469443 PAMP19021 973 aa17.68■□□□□ 0.42
PHGDH-204ENST00000469443 OAS2P29728 719 aaKnown RBP17.68■□□□□ 0.42
PHGDH-204ENST00000469443 DNASE1L3Q13609 305 aa17.68■□□□□ 0.42
PHGDH-204ENST00000469443 RNF187Q5TA31 235 aaPredicted RBP17.68■□□□□ 0.42
PHGDH-204ENST00000469443 ZNF605Q86T29 641 aa17.68■□□□□ 0.42
PHGDH-204ENST00000469443 CT55Q8WUE5 264 aa17.68■□□□□ 0.42
PHGDH-204ENST00000469443 ANP32BQ92688 251 aaKnown RBP17.68■□□□□ 0.42
PHGDH-204ENST00000469443 SERPINB12Q96P63 405 aa17.68■□□□□ 0.42
PHGDH-204ENST00000469443 OR2A14Q96R47 310 aa17.68■□□□□ 0.42
PHGDH-204ENST00000469443 HELZ2Q9BYK8 2649 aaKnown RBP17.68■□□□□ 0.42
PHGDH-204ENST00000469443 KLHL25Q9H0H3 589 aa17.68■□□□□ 0.42
PHGDH-204ENST00000469443 ADNPQ9H2P0 1102 aa17.68■□□□□ 0.42
PHGDH-204ENST00000469443 SPHK1Q9NYA1 384 aa17.68■□□□□ 0.42
PHGDH-204ENST00000469443 CCDC88CQ9P219 2028 aa17.68■□□□□ 0.42
PHGDH-204ENST00000469443 PCDHB3Q9Y5E6 796 aa17.68■□□□□ 0.42
PHGDH-204ENST00000469443 PCDHGA6Q9Y5G7 932 aa17.68■□□□□ 0.42
PHGDH-204ENST00000469443 SPTA1P02549 2419 aa17.68■□□□□ 0.42
PHGDH-204ENST00000469443 FAM237BA0A1B0GVD1 139 aa17.67■□□□□ 0.42
PHGDH-204ENST00000469443 MAGEB16A2A368 324 aa17.67■□□□□ 0.42
PHGDH-204ENST00000469443 SDR42E2A6NKP2 422 aa17.67■□□□□ 0.42
PHGDH-204ENST00000469443 B8ZZF3 427 aa17.67■□□□□ 0.42
PHGDH-204ENST00000469443 C21orf140B9A014 251 aa17.67■□□□□ 0.42
PHGDH-204ENST00000469443 TMEM150CB9EJG8 249 aa17.67■□□□□ 0.42
PHGDH-204ENST00000469443 GOLGA8KD6RF30 607 aa17.67■□□□□ 0.42
PHGDH-204ENST00000469443 GOLGA8TH3BQL2 631 aa17.67■□□□□ 0.42
PHGDH-204ENST00000469443 GOLGA8MH3BSY2 632 aa17.67■□□□□ 0.42
PHGDH-204ENST00000469443 KATNA1O75449 491 aa17.67■□□□□ 0.42
PHGDH-204ENST00000469443 OGNP20774 298 aaKnown RBP17.67■□□□□ 0.42
PHGDH-204ENST00000469443 PKLRP30613 574 aa17.67■□□□□ 0.42
PHGDH-204ENST00000469443 CCR10P46092 362 aa17.67■□□□□ 0.42
PHGDH-204ENST00000469443 RAB28P51157 221 aa17.67■□□□□ 0.42
PHGDH-204ENST00000469443 ABRQ12979 859 aa17.67■□□□□ 0.42
PHGDH-204ENST00000469443 KYNUQ16719 465 aa17.67■□□□□ 0.42
PHGDH-204ENST00000469443 CTSL3PQ5NE16 218 aa17.67■□□□□ 0.42
PHGDH-204ENST00000469443 PLEKHS1Q5SXH7 462 aa17.67■□□□□ 0.42
PHGDH-204ENST00000469443 C16orf46Q6P387 395 aa17.67■□□□□ 0.42
PHGDH-204ENST00000469443 OTOAQ7RTW8 1153 aa17.67■□□□□ 0.42
PHGDH-204ENST00000469443 TRIM73Q86UV7 250 aa17.67■□□□□ 0.42
PHGDH-204ENST00000469443 DCUN1D3Q8IWE4 304 aa17.67■□□□□ 0.42
PHGDH-204ENST00000469443 NAT8LQ8N9F0 302 aa17.67■□□□□ 0.42
PHGDH-204ENST00000469443 C19orf47Q8N9M1 422 aaKnown RBP17.67■□□□□ 0.42
PHGDH-204ENST00000469443 OR1L3Q8NH93 324 aa17.67■□□□□ 0.42
PHGDH-204ENST00000469443 CFAP61Q8NHU2 1237 aa17.67■□□□□ 0.42
PHGDH-204ENST00000469443 FLVCR1-AS1Q8TAF5 88 aa17.67■□□□□ 0.42
PHGDH-204ENST00000469443 GSDMBQ8TAX9 411 aa17.67■□□□□ 0.42
PHGDH-204ENST00000469443 LPGAT1Q92604 370 aa17.67■□□□□ 0.42
PHGDH-204ENST00000469443 PDLIM2Q96JY6 352 aa17.67■□□□□ 0.42
PHGDH-204ENST00000469443 LRFN5Q96NI6 719 aa17.67■□□□□ 0.42
PHGDH-204ENST00000469443 BIRC8Q96P09 236 aa17.67■□□□□ 0.42
PHGDH-204ENST00000469443 GEMIN8Q9NWZ8 242 aaKnown RBP17.67■□□□□ 0.42
PHGDH-204ENST00000469443 TCP1P17987 556 aaKnown RBP17.66■□□□□ 0.42
PHGDH-204ENST00000469443 MAGEA3P43357 314 aa17.66■□□□□ 0.42
PHGDH-204ENST00000469443 GPS2Q13227 327 aa17.66■□□□□ 0.42
PHGDH-204ENST00000469443 DHX34Q14147 1143 aaKnown RBP17.66■□□□□ 0.42
PHGDH-204ENST00000469443 KIR2DS3Q14952 304 aa17.66■□□□□ 0.42
PHGDH-204ENST00000469443 ANKRD20A4Q4UJ75 823 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms